Wall clock time and date at job start Tue Mar 31 2020 06:06:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35656 * 117.00148 * 2 1 4 4 C 1.38705 * 120.14047 * 0.02562 * 3 2 1 5 5 C 1.38052 * 120.10388 * 179.97438 * 4 3 2 6 6 C 1.38656 * 120.39261 * 359.97438 * 5 4 3 7 7 Cl 1.73601 * 119.86069 * 180.02562 * 6 5 4 8 8 C 1.37875 * 120.27939 * 359.72282 * 6 5 4 9 9 C 1.39768 * 119.88709 * 0.55698 * 8 6 5 10 10 C 1.47406 * 120.19042 * 179.71851 * 9 8 6 11 11 O 1.21511 * 119.99537 * 179.45259 * 10 9 8 12 12 O 1.34749 * 119.99669 * 359.72261 * 10 9 8 13 13 C 1.45208 * 116.99513 * 180.02562 * 12 10 9 14 14 C 1.52997 * 109.46660 * 180.02562 * 13 12 10 15 15 C 1.50700 * 109.47115 * 179.97438 * 14 13 12 16 16 H 1.08001 * 119.99951 * 359.97438 * 15 14 13 17 17 C 1.37878 * 120.00266 * 179.97438 * 15 14 13 18 18 N 1.31509 * 120.00106 * 0.02562 * 17 15 14 19 19 Si 1.86799 * 119.99844 * 180.02562 * 17 15 14 20 20 H 1.48495 * 109.47231 * 90.00314 * 19 17 15 21 21 H 1.48500 * 109.46921 * 210.00289 * 19 17 15 22 22 H 1.48501 * 109.47459 * 330.00074 * 19 17 15 23 23 H 1.08998 * 109.47081 * 60.00449 * 1 2 3 24 24 H 1.09003 * 109.47023 * 180.02562 * 1 2 3 25 25 H 1.09002 * 109.47199 * 300.00013 * 1 2 3 26 26 H 1.08004 * 119.94667 * 359.97438 * 4 3 2 27 27 H 1.07997 * 119.80202 * 180.02562 * 5 4 3 28 28 H 1.08003 * 120.05497 * 180.27956 * 8 6 5 29 29 H 1.09003 * 109.46907 * 299.99907 * 13 12 10 30 30 H 1.08995 * 109.46854 * 60.00352 * 13 12 10 31 31 H 1.08999 * 109.47692 * 299.99922 * 14 13 12 32 32 H 1.09000 * 109.47887 * 60.00208 * 14 13 12 33 33 H 0.96996 * 120.00086 * 179.97438 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 1.2923 2.3738 0.0005 5 6 1.9199 3.6035 0.0011 6 6 3.3041 3.6846 0.0016 7 17 4.0788 5.2381 0.0030 8 6 4.0677 2.5367 0.0074 9 6 3.4446 1.2856 0.0009 10 6 4.2546 0.0540 0.0008 11 8 3.7092 -1.0318 0.0052 12 8 5.5998 0.1324 0.0012 13 6 6.3331 -1.1209 0.0005 14 6 7.8356 -0.8325 0.0017 15 6 8.5968 -2.1332 0.0016 16 1 8.0622 -3.0716 0.0011 17 6 9.9755 -2.1252 0.0021 18 7 10.6265 -0.9825 0.0032 19 14 10.9188 -3.7375 0.0012 20 1 11.1694 -4.1636 -1.3991 21 1 12.2151 -3.5529 0.7019 22 1 10.1221 -4.7777 0.7001 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3634 0.5138 0.8900 26 1 0.2137 2.3190 0.0005 27 1 1.3292 4.5076 0.0019 28 1 5.1456 2.6041 0.0123 29 1 6.0728 -1.6946 0.8900 30 1 6.0734 -1.6932 -0.8900 31 1 8.0963 -0.2585 -0.8875 32 1 8.0952 -0.2603 0.8925 33 1 11.5964 -0.9769 0.0040 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000916599355.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:06:04 Heat of formation + Delta-G solvation = -111.927071 kcal Electronic energy + Delta-G solvation = -19245.271446 eV Core-core repulsion = 15876.356366 eV Total energy + Delta-G solvation = -3368.915080 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 284.065 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -40.78184 -39.32465 -37.91868 -36.35184 -35.91288 -33.32686 -31.93678 -30.24706 -30.13667 -27.60477 -25.43367 -24.10002 -22.46958 -21.22908 -20.56209 -18.53675 -17.56947 -16.83451 -16.36987 -16.21611 -15.73764 -15.64741 -15.36973 -14.72852 -14.43355 -14.10065 -13.70768 -13.07063 -13.05455 -12.58384 -12.35525 -12.22049 -12.13435 -11.61213 -11.19904 -11.16269 -11.01264 -10.92637 -10.71983 -10.66235 -10.15322 -9.61367 -9.58845 -9.44600 -9.27415 -8.44825 -8.41550 -6.08013 -4.12161 0.48418 0.91774 1.93773 2.64583 2.93596 3.11947 3.30529 3.36613 3.41170 3.52804 4.32455 4.40326 4.48031 4.68821 4.85731 4.86473 4.98048 5.21650 5.23414 5.28659 5.49173 5.54147 5.78464 5.85374 6.13962 6.14364 6.19224 6.67298 6.95619 7.04438 7.59012 7.65548 7.89618 8.22580 8.30530 8.93360 9.52097 11.03532 Molecular weight = 284.06amu Principal moments of inertia in cm(-1) A = 0.018804 B = 0.003757 C = 0.003140 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1488.690938 B = 7451.491683 C = 8914.432064 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.278 6.278 3 C 0.191 3.809 4 C -0.214 4.214 5 C -0.039 4.039 6 C -0.089 4.089 7 Cl -0.063 7.063 8 C -0.012 4.012 9 C -0.142 4.142 10 C 0.501 3.499 11 O -0.494 6.494 12 O -0.355 6.355 13 C 0.078 3.922 14 C 0.024 3.976 15 C -0.526 4.526 16 H 0.059 0.941 17 C 0.061 3.939 18 N -0.890 5.890 19 Si 0.899 3.101 20 H -0.279 1.279 21 H -0.285 1.285 22 H -0.272 1.272 23 H 0.058 0.942 24 H 0.105 0.895 25 H 0.058 0.942 26 H 0.145 0.855 27 H 0.141 0.859 28 H 0.160 0.840 29 H 0.059 0.941 30 H 0.059 0.941 31 H 0.029 0.971 32 H 0.029 0.971 33 H 0.263 0.737 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -21.282 10.833 -0.003 23.881 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.188 6.188 3 C 0.143 3.857 4 C -0.233 4.233 5 C -0.058 4.058 6 C -0.116 4.116 7 Cl -0.035 7.035 8 C -0.031 4.031 9 C -0.144 4.144 10 C 0.345 3.655 11 O -0.383 6.383 12 O -0.271 6.271 13 C 0.005 3.995 14 C -0.013 4.013 15 C -0.564 4.564 16 H 0.078 0.922 17 C -0.141 4.141 18 N -0.528 5.528 19 Si 0.727 3.273 20 H -0.205 1.205 21 H -0.211 1.211 22 H -0.197 1.197 23 H 0.077 0.923 24 H 0.123 0.877 25 H 0.077 0.923 26 H 0.163 0.837 27 H 0.159 0.841 28 H 0.178 0.822 29 H 0.078 0.922 30 H 0.078 0.922 31 H 0.047 0.953 32 H 0.047 0.953 33 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges -21.072 10.476 0.005 23.532 hybrid contribution 0.377 -0.635 -0.012 0.739 sum -20.695 9.841 -0.007 22.916 Atomic orbital electron populations 1.23226 0.78317 1.04685 1.01328 1.86411 1.21147 1.25063 1.86182 1.19104 0.90655 0.85277 0.90684 1.21122 1.00586 0.91004 1.10588 1.21018 0.92411 0.98150 0.94195 1.20646 0.92813 0.87175 1.10988 1.98379 1.81145 1.26700 1.97235 1.21368 1.01729 0.88717 0.91247 1.18571 0.89697 0.92429 1.13749 1.20600 0.82399 0.88340 0.74185 1.90851 1.73175 1.29244 1.45007 1.86562 1.17623 1.39888 1.83077 1.23655 0.93770 0.81030 1.01032 1.19176 0.85056 0.98136 0.98911 1.20982 0.91287 0.92021 1.52132 0.92245 1.24974 0.97629 0.96625 0.94885 1.69970 1.07992 1.25051 1.49821 0.86477 0.79223 0.83417 0.78227 1.20496 1.21069 1.19718 0.92342 0.87690 0.92348 0.83724 0.84148 0.82246 0.92234 0.92239 0.95305 0.95299 0.92727 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.15 9.81 101.05 0.99 1.14 16 2 O -0.28 -3.72 8.57 -40.56 -0.35 -4.06 16 3 C 0.19 2.46 6.70 -38.68 -0.26 2.20 16 4 C -0.21 -1.96 9.03 -39.48 -0.36 -2.32 16 5 C -0.04 -0.35 9.81 -39.50 -0.39 -0.73 16 6 C -0.09 -0.99 6.31 -39.56 -0.25 -1.24 16 7 Cl -0.06 -0.67 28.94 -51.86 -1.50 -2.17 16 8 C -0.01 -0.16 9.39 -39.14 -0.37 -0.52 16 9 C -0.14 -2.16 5.88 -104.86 -0.62 -2.77 16 10 C 0.50 9.56 7.89 34.46 0.27 9.83 16 11 O -0.49 -10.48 14.95 -26.60 -0.40 -10.87 16 12 O -0.35 -7.34 9.47 -40.62 -0.38 -7.72 16 13 C 0.08 1.77 5.41 37.16 0.20 1.97 16 14 C 0.02 0.64 5.35 -27.89 -0.15 0.49 16 15 C -0.53 -14.93 9.11 -34.44 -0.31 -15.24 16 16 H 0.06 1.63 7.74 -52.49 -0.41 1.23 16 17 C 0.06 1.74 5.46 -17.82 -0.10 1.64 16 18 N -0.89 -26.50 13.29 55.43 0.74 -25.76 16 19 Si 0.90 21.55 29.54 -169.99 -5.02 16.53 16 20 H -0.28 -6.58 7.11 56.52 0.40 -6.18 16 21 H -0.28 -6.73 7.11 56.52 0.40 -6.33 16 22 H -0.27 -6.40 7.11 56.52 0.40 -6.00 16 23 H 0.06 0.33 7.66 -51.93 -0.40 -0.06 16 24 H 0.10 0.67 8.14 -51.93 -0.42 0.25 16 25 H 0.06 0.33 7.66 -51.93 -0.40 -0.06 16 26 H 0.15 0.86 6.30 -52.48 -0.33 0.53 16 27 H 0.14 0.86 8.06 -52.49 -0.42 0.43 16 28 H 0.16 2.16 7.61 -52.48 -0.40 1.76 16 29 H 0.06 1.34 8.14 -51.93 -0.42 0.92 16 30 H 0.06 1.34 8.14 -51.93 -0.42 0.92 16 31 H 0.03 0.79 8.14 -51.93 -0.42 0.37 16 32 H 0.03 0.79 8.14 -51.93 -0.42 0.37 16 33 H 0.26 7.35 8.31 -40.82 -0.34 7.01 16 LS Contribution 310.27 15.07 4.68 4.68 Total: -1.00 -32.62 310.27 -7.18 -39.80 By element: Atomic # 1 Polarization: -1.25 SS G_CDS: -3.60 Total: -4.85 kcal Atomic # 6 Polarization: -4.22 SS G_CDS: -1.33 Total: -5.56 kcal Atomic # 7 Polarization: -26.50 SS G_CDS: 0.74 Total: -25.76 kcal Atomic # 8 Polarization: -21.53 SS G_CDS: -1.13 Total: -22.66 kcal Atomic # 14 Polarization: 21.55 SS G_CDS: -5.02 Total: 16.53 kcal Atomic # 17 Polarization: -0.67 SS G_CDS: -1.50 Total: -2.17 kcal Total LS contribution 4.68 Total: 4.68 kcal Total: -32.62 -7.18 -39.80 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000916599355.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.129 kcal (2) G-P(sol) polarization free energy of solvation -32.623 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -104.752 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.175 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.799 kcal (6) G-S(sol) free energy of system = (1) + (5) -111.927 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds