Wall clock time and date at job start Tue Mar 31 2020 05:36:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.31345 * 1 3 3 Si 1.86797 * 119.99798 * 2 1 4 4 H 1.48509 * 109.46814 * 180.02562 * 3 2 1 5 5 H 1.48499 * 109.47066 * 299.99301 * 3 2 1 6 6 H 1.48499 * 109.47395 * 60.00034 * 3 2 1 7 7 C 1.39088 * 119.99723 * 179.97438 * 2 1 3 8 8 H 1.08000 * 119.99571 * 169.11185 * 7 2 1 9 9 N 1.36820 * 119.99998 * 349.11415 * 7 2 1 10 10 C 1.34769 * 120.00104 * 313.39900 * 9 7 2 11 11 O 1.21585 * 120.00332 * 3.46434 * 10 9 7 12 12 C 1.47856 * 120.00144 * 183.46964 * 10 9 7 13 13 C 1.39933 * 120.94004 * 318.85802 * 12 10 9 14 14 C 1.38173 * 119.01797 * 180.02562 * 13 12 10 15 15 Cl 1.73592 * 119.52834 * 180.02562 * 14 13 12 16 16 N 1.31972 * 120.94535 * 359.97438 * 14 13 12 17 17 C 1.31771 * 122.09341 * 359.97438 * 16 14 13 18 18 C 1.38435 * 120.87859 * 0.28165 * 17 16 14 19 19 F 1.35103 * 120.53227 * 179.69829 * 18 17 16 20 20 C 1.46504 * 119.99746 * 133.40451 * 9 7 2 21 21 C 1.53002 * 117.49751 * 2.31706 * 20 9 7 22 22 C 1.53003 * 117.49401 * 293.66069 * 20 9 7 23 23 H 0.97003 * 119.99701 * 5.03149 * 1 2 3 24 24 H 1.08000 * 120.49615 * 359.97438 * 13 12 10 25 25 H 1.08004 * 119.56387 * 179.97438 * 17 16 14 26 26 H 1.08997 * 115.54655 * 147.99378 * 20 9 7 27 27 H 1.08993 * 117.49918 * 0.02562 * 21 20 9 28 28 H 1.08998 * 117.49119 * 145.02354 * 21 20 9 29 29 H 1.09004 * 117.49762 * 214.97931 * 22 20 9 30 30 H 1.08997 * 117.50049 * 359.97438 * 22 20 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3134 0.0000 0.0000 3 14 2.2474 1.6177 0.0000 4 1 3.7074 1.3463 -0.0006 5 1 1.8887 2.3963 -1.2126 6 1 1.8886 2.3965 1.2125 7 6 2.0088 -1.2046 0.0005 8 1 3.0742 -1.2130 -0.1761 9 7 1.3431 -2.3787 0.2248 10 6 0.4658 -2.4719 1.2436 11 8 0.2186 -1.4953 1.9243 12 6 -0.1962 -3.7618 1.5335 13 6 -0.6614 -4.5804 0.4984 14 6 -1.2745 -5.7776 0.8146 15 17 -1.8560 -6.8037 -0.4591 16 7 -1.4236 -6.1526 2.0711 17 6 -1.0002 -5.4142 3.0770 18 6 -0.3792 -4.1973 2.8531 19 9 0.0468 -3.4431 3.8899 20 6 1.5842 -3.5346 -0.6424 21 6 2.6315 -3.3825 -1.7474 22 6 1.1434 -3.4256 -2.1035 23 1 -0.4850 0.8369 -0.0737 24 1 -0.5437 -4.2806 -0.5325 25 1 -1.1438 -5.7606 4.0899 26 1 1.4974 -4.5090 -0.1618 27 1 3.1414 -2.4226 -1.8288 28 1 3.2334 -4.2571 -1.9940 29 1 0.7670 -4.3285 -2.5843 30 1 0.6737 -2.4941 -2.4193 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000930616078.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:36:53 Heat of formation + Delta-G solvation = 1.437949 kcal Electronic energy + Delta-G solvation = -20350.947312 eV Core-core repulsion = 16895.780554 eV Total energy + Delta-G solvation = -3455.166758 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 284.047 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -48.61034 -40.14772 -38.47837 -36.57359 -36.15935 -33.15337 -32.44051 -30.91391 -30.48036 -25.83518 -24.27555 -23.18900 -21.86617 -21.37425 -19.99129 -17.84295 -17.18015 -17.01885 -16.35747 -15.73025 -15.51254 -15.09397 -14.38170 -14.15984 -13.87315 -13.80572 -13.63986 -13.13606 -12.87792 -12.23882 -12.12548 -11.50879 -11.28894 -11.18876 -11.14717 -11.00122 -10.61472 -10.37221 -10.12971 -9.95405 -9.77036 -9.50251 -8.92473 -8.66993 -8.37357 -7.21894 -6.29625 -4.11043 0.85678 0.96509 1.82654 3.18637 3.27156 3.30553 3.42089 3.99484 4.03404 4.24096 4.41445 4.54481 4.64912 4.88478 4.93926 5.19543 5.29393 5.45458 5.56698 5.68872 5.73194 5.83491 6.08704 6.17574 6.31369 6.55089 6.70781 6.85181 7.42130 7.61197 8.05612 8.78340 8.88066 9.36647 9.99610 10.76427 Molecular weight = 284.05amu Principal moments of inertia in cm(-1) A = 0.019649 B = 0.006799 C = 0.005560 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1424.635520 B = 4117.272695 C = 5034.930041 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.816 5.816 2 C 0.064 3.936 3 Si 0.918 3.082 4 H -0.269 1.269 5 H -0.282 1.282 6 H -0.279 1.279 7 C -0.338 4.338 8 H 0.087 0.913 9 N -0.407 5.407 10 C 0.503 3.497 11 O -0.501 6.501 12 C -0.072 4.072 13 C -0.110 4.110 14 C 0.153 3.847 15 Cl -0.032 7.032 16 N -0.458 5.458 17 C 0.083 3.917 18 C 0.084 3.916 19 F -0.111 7.111 20 C 0.056 3.944 21 C -0.174 4.174 22 C -0.197 4.197 23 H 0.268 0.732 24 H 0.163 0.837 25 H 0.176 0.824 26 H 0.106 0.894 27 H 0.108 0.892 28 H 0.086 0.914 29 H 0.086 0.914 30 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.267 -10.529 -1.297 10.612 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.449 5.449 2 C -0.148 4.148 3 Si 0.745 3.255 4 H -0.193 1.193 5 H -0.208 1.208 6 H -0.205 1.205 7 C -0.465 4.465 8 H 0.105 0.895 9 N -0.126 5.126 10 C 0.289 3.711 11 O -0.377 6.377 12 C -0.085 4.085 13 C -0.131 4.131 14 C -0.010 4.010 15 Cl -0.003 7.003 16 N -0.169 5.169 17 C -0.075 4.075 18 C 0.061 3.939 19 F -0.089 7.089 20 C -0.050 4.050 21 C -0.211 4.211 22 C -0.235 4.235 23 H 0.078 0.922 24 H 0.181 0.819 25 H 0.193 0.807 26 H 0.123 0.877 27 H 0.126 0.874 28 H 0.104 0.896 29 H 0.104 0.896 30 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges -1.002 -10.710 -0.771 10.784 hybrid contribution 0.602 1.494 -0.256 1.631 sum -0.399 -9.215 -1.027 9.281 Atomic orbital electron populations 1.69835 1.06532 1.27853 1.40662 1.25448 0.95086 0.99717 0.94580 0.86035 0.79742 0.81978 0.77786 1.19285 1.20831 1.20452 1.19122 0.92241 0.82247 1.52848 0.89516 1.42593 1.38392 1.09378 1.22277 1.17408 0.84915 0.85593 0.83138 1.90711 1.62041 1.35908 1.49020 1.21329 0.97759 0.97857 0.91524 1.22327 0.96865 0.91907 1.02016 1.21490 0.99160 0.91403 0.88986 1.98386 1.87364 1.68094 1.46489 1.66829 1.17813 1.33745 0.98551 1.22595 0.96534 0.89745 0.98670 1.18847 0.99239 0.91405 0.84381 1.91577 1.87027 1.74943 1.55327 1.21972 1.04605 0.91563 0.86825 1.23128 0.92050 1.03328 1.02607 1.23340 0.97873 1.03032 0.99287 0.92209 0.81938 0.80712 0.87673 0.87396 0.89581 0.89556 0.87975 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.82 -23.11 11.29 55.50 0.63 -22.48 16 2 C 0.06 1.70 4.62 -17.44 -0.08 1.62 16 3 Si 0.92 20.73 29.57 -169.99 -5.03 15.70 16 4 H -0.27 -5.82 7.11 56.52 0.40 -5.42 16 5 H -0.28 -6.19 7.11 56.52 0.40 -5.79 16 6 H -0.28 -6.53 7.11 56.52 0.40 -6.13 16 7 C -0.34 -8.70 8.01 -15.01 -0.12 -8.82 16 8 H 0.09 2.14 7.09 -52.49 -0.37 1.77 16 9 N -0.41 -9.74 2.82 -108.79 -0.31 -10.05 16 10 C 0.50 12.65 6.56 -12.33 -0.08 12.57 16 11 O -0.50 -14.72 13.91 5.29 0.07 -14.65 16 12 C -0.07 -1.47 5.27 -104.60 -0.55 -2.02 16 13 C -0.11 -1.91 7.44 -38.97 -0.29 -2.20 16 14 C 0.15 2.42 7.26 -17.52 -0.13 2.29 16 15 Cl -0.03 -0.43 29.10 -51.86 -1.51 -1.94 16 16 N -0.46 -7.21 10.31 -10.37 -0.11 -7.32 16 17 C 0.08 1.25 11.17 -17.50 -0.20 1.05 16 18 C 0.08 1.55 7.30 -38.79 -0.28 1.27 16 19 F -0.11 -2.19 16.43 2.25 0.04 -2.15 16 20 C 0.06 1.06 4.38 -67.93 -0.30 0.76 16 21 C -0.17 -2.87 9.81 -26.69 -0.26 -3.13 16 22 C -0.20 -3.31 9.35 -26.69 -0.25 -3.56 16 23 H 0.27 7.24 8.31 -40.82 -0.34 6.90 16 24 H 0.16 2.77 5.50 -52.49 -0.29 2.48 16 25 H 0.18 1.95 8.06 -52.48 -0.42 1.53 16 26 H 0.11 1.80 6.20 -51.93 -0.32 1.47 16 27 H 0.11 1.95 6.64 -51.93 -0.34 1.61 16 28 H 0.09 1.17 8.14 -51.93 -0.42 0.74 16 29 H 0.09 1.19 8.14 -51.93 -0.42 0.77 16 30 H 0.10 1.99 8.14 -51.93 -0.42 1.57 16 LS Contribution 282.17 15.07 4.25 4.25 Total: -1.00 -30.63 282.17 -6.65 -37.28 By element: Atomic # 1 Polarization: 3.66 SS G_CDS: -2.15 Total: 1.51 kcal Atomic # 6 Polarization: 2.38 SS G_CDS: -2.54 Total: -0.16 kcal Atomic # 7 Polarization: -40.06 SS G_CDS: 0.21 Total: -39.85 kcal Atomic # 8 Polarization: -14.72 SS G_CDS: 0.07 Total: -14.65 kcal Atomic # 9 Polarization: -2.19 SS G_CDS: 0.04 Total: -2.15 kcal Atomic # 14 Polarization: 20.73 SS G_CDS: -5.03 Total: 15.70 kcal Atomic # 17 Polarization: -0.43 SS G_CDS: -1.51 Total: -1.94 kcal Total LS contribution 4.25 Total: 4.25 kcal Total: -30.63 -6.65 -37.28 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000930616078.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.715 kcal (2) G-P(sol) polarization free energy of solvation -30.625 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.090 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.652 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.277 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.438 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds