Wall clock time and date at job start Tue Mar 31 2020 05:34:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.43205 * 179.97438 * 2 1 4 4 C 1.39114 * 120.56084 * 215.69566 * 3 2 1 5 5 C 1.39354 * 119.80342 * 180.30089 * 4 3 2 6 6 C 1.48041 * 119.49817 * 179.70943 * 5 4 3 7 7 C 1.39971 * 120.92874 * 129.98092 * 6 5 4 8 8 C 1.37920 * 119.01177 * 180.02562 * 7 6 5 9 9 N 1.31956 * 120.93699 * 0.02562 * 8 7 6 10 10 C 1.31898 * 122.06769 * 359.97438 * 9 8 7 11 11 C 1.38122 * 120.88067 * 359.70730 * 10 9 8 12 12 Cl 1.73601 * 120.52225 * 180.29339 * 11 10 9 13 13 C 1.39955 * 121.00302 * 359.69367 * 5 4 3 14 14 C 1.36038 * 121.19589 * 359.97438 * 13 5 4 15 15 C 1.41027 * 120.10481 * 0.02792 * 14 13 5 16 16 C 1.40471 * 120.49056 * 179.97438 * 15 14 13 17 17 H 1.08001 * 120.00248 * 154.64459 * 16 15 14 18 18 C 1.40346 * 120.00121 * 334.64367 * 16 15 14 19 19 N 1.30611 * 119.99743 * 334.62570 * 18 16 15 20 20 Si 1.86795 * 119.99861 * 154.61865 * 18 16 15 21 21 H 1.48512 * 109.46916 * 180.02562 * 20 18 16 22 22 H 1.48497 * 109.47401 * 300.00387 * 20 18 16 23 23 H 1.48501 * 109.47301 * 60.00624 * 20 18 16 24 24 H 1.08003 * 120.09852 * 359.97438 * 4 3 2 25 25 H 1.08001 * 120.49851 * 359.97438 * 7 6 5 26 26 H 1.08002 * 119.53338 * 179.97438 * 8 7 6 27 27 H 1.07998 * 119.56360 * 179.97438 * 10 9 8 28 28 H 1.08000 * 119.40563 * 180.02562 * 13 5 4 29 29 H 1.07997 * 119.94956 * 180.02562 * 14 13 5 30 30 H 0.97004 * 120.00405 * 354.18377 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2749 0.9738 0.6989 5 6 4.6684 0.9632 0.6830 6 6 5.4138 2.0058 1.4239 7 6 6.4470 1.6633 2.3039 8 6 7.1149 2.6667 2.9741 9 7 6.7917 3.9336 2.7956 10 6 5.8254 4.3010 1.9765 11 6 5.1085 3.3628 1.2598 12 17 3.8435 3.8573 0.1786 13 6 5.3738 -0.0184 -0.0224 14 6 4.7239 -0.9930 -0.7141 15 6 3.3142 -1.0283 -0.7310 16 6 2.6348 -2.0307 -1.4431 17 1 1.6358 -2.3183 -1.1504 18 6 3.2543 -2.6584 -2.5349 19 7 4.1899 -2.0365 -3.2010 20 14 2.7407 -4.3833 -3.0350 21 1 3.5409 -4.8173 -4.2085 22 1 2.9748 -5.3170 -1.9042 23 1 1.2988 -4.3872 -3.3899 24 1 2.7454 1.7384 1.2479 25 1 6.7167 0.6287 2.4564 26 1 7.9133 2.4120 3.6554 27 1 5.5944 5.3497 1.8614 28 1 6.4536 -0.0024 -0.0169 29 1 5.2884 -1.7408 -1.2512 30 1 4.3982 -1.1115 -2.9960 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001243385399.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:34:55 Heat of formation + Delta-G solvation = 55.929370 kcal Electronic energy + Delta-G solvation = -18316.413566 eV Core-core repulsion = 15294.378958 eV Total energy + Delta-G solvation = -3022.034608 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 284.041 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -39.97192 -38.05180 -36.29922 -35.35534 -34.81833 -32.44501 -30.89865 -30.20299 -29.31724 -26.01920 -23.46313 -23.09945 -22.31216 -20.91619 -18.60437 -17.72013 -16.29119 -16.18495 -15.54153 -15.14725 -14.83905 -14.22732 -13.90878 -13.78643 -13.50461 -13.04165 -12.68053 -12.48097 -12.08083 -12.02592 -11.82554 -11.70652 -11.51897 -11.15380 -11.06830 -10.83108 -10.64847 -10.19004 -10.05653 -9.57677 -9.39167 -9.32002 -8.77998 -8.11663 -7.92106 -7.66390 -5.00918 1.11483 1.23673 1.99342 2.36360 2.44525 2.92987 3.00378 3.13480 3.65146 3.73311 3.78472 3.98315 4.24821 4.53286 4.88395 4.94593 5.13385 5.16420 5.27362 5.51258 5.72427 5.77408 5.87584 6.15114 6.26474 6.47383 6.54228 6.68344 6.85320 7.09553 7.21385 7.27987 7.40328 7.56657 7.70927 7.99546 8.12719 8.23159 8.63537 9.44975 Molecular weight = 284.04amu Principal moments of inertia in cm(-1) A = 0.022409 B = 0.004996 C = 0.004471 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1249.208227 B = 5602.897507 C = 6260.383483 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.501 5.501 2 C 0.297 3.703 3 C -0.187 4.187 4 C 0.028 3.972 5 C -0.234 4.234 6 C 0.065 3.935 7 C -0.170 4.170 8 C 0.097 3.903 9 N -0.494 5.494 10 C 0.111 3.889 11 C -0.103 4.103 12 Cl -0.054 7.054 13 C -0.027 4.027 14 C -0.218 4.218 15 C 0.131 3.869 16 C -0.457 4.457 17 H 0.088 0.912 18 C 0.035 3.965 19 N -0.750 5.750 20 Si 1.067 2.933 21 H -0.267 1.267 22 H -0.267 1.267 23 H -0.270 1.270 24 H 0.103 0.897 25 H 0.140 0.860 26 H 0.156 0.844 27 H 0.157 0.843 28 H 0.098 0.902 29 H 0.116 0.884 30 H 0.309 0.691 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.420 3.712 4.719 8.790 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.180 5.180 2 C -0.013 4.013 3 C -0.193 4.193 4 C 0.007 3.993 5 C -0.235 4.235 6 C 0.057 3.943 7 C -0.190 4.190 8 C -0.058 4.058 9 N -0.204 5.204 10 C -0.046 4.046 11 C -0.132 4.132 12 Cl -0.025 7.025 13 C -0.046 4.046 14 C -0.237 4.237 15 C 0.125 3.875 16 C -0.483 4.483 17 H 0.106 0.894 18 C -0.192 4.192 19 N -0.370 5.370 20 Si 0.888 3.112 21 H -0.191 1.191 22 H -0.192 1.192 23 H -0.195 1.195 24 H 0.121 0.879 25 H 0.158 0.842 26 H 0.173 0.827 27 H 0.174 0.826 28 H 0.116 0.884 29 H 0.134 0.866 30 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges 5.407 3.221 3.983 7.448 hybrid contribution -0.403 0.739 0.530 0.995 sum 5.005 3.960 4.513 7.816 Atomic orbital electron populations 1.81041 1.12590 1.11215 1.13116 1.25685 0.92628 0.91592 0.91381 1.16646 0.83352 1.02973 1.16322 1.20584 0.92379 0.93711 0.92621 1.17432 0.91799 1.01681 1.12630 1.19208 0.92291 0.91053 0.91753 1.22326 0.97549 1.01382 0.97760 1.22667 0.98015 0.87882 0.97231 1.67716 1.15188 1.19990 1.17518 1.22564 0.91070 0.99326 0.91678 1.22341 0.96785 0.94744 0.99309 1.98371 1.50113 1.91037 1.62974 1.20296 0.97656 0.92524 0.94107 1.20745 0.93561 1.01825 1.07584 1.18493 0.91428 0.88475 0.89135 1.20991 1.03420 1.13439 1.10412 0.89356 1.27464 0.92181 1.06601 0.92966 1.70396 1.19938 1.14477 1.32182 0.83588 0.77605 0.72074 0.77960 1.19125 1.19214 1.19468 0.87910 0.84206 0.82718 0.82612 0.88372 0.86601 0.87681 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.50 -11.85 18.54 41.84 0.78 -11.07 16 2 C 0.30 6.82 14.30 -22.47 -0.32 6.49 16 3 C -0.19 -4.12 5.93 -104.26 -0.62 -4.73 16 4 C 0.03 0.56 7.95 -38.84 -0.31 0.25 16 5 C -0.23 -4.32 5.19 -104.82 -0.54 -4.87 16 6 C 0.07 1.06 5.47 -104.55 -0.57 0.49 16 7 C -0.17 -2.36 9.61 -39.05 -0.38 -2.73 16 8 C 0.10 1.24 11.17 -17.61 -0.20 1.05 16 9 N -0.49 -7.05 10.34 -13.32 -0.14 -7.19 16 10 C 0.11 1.56 10.98 -17.57 -0.19 1.37 16 11 C -0.10 -1.60 6.31 -38.94 -0.25 -1.84 16 12 Cl -0.05 -0.85 26.23 -51.86 -1.36 -2.21 16 13 C -0.03 -0.50 9.38 -39.73 -0.37 -0.87 16 14 C -0.22 -4.55 7.88 -39.32 -0.31 -4.86 16 15 C 0.13 2.95 5.46 -104.62 -0.57 2.38 16 16 C -0.46 -10.55 8.49 -37.95 -0.32 -10.87 16 17 H 0.09 2.08 7.45 -52.49 -0.39 1.69 16 18 C 0.04 0.77 4.95 -17.28 -0.09 0.68 16 19 N -0.75 -16.85 12.30 55.57 0.68 -16.17 16 20 Si 1.07 18.61 30.01 -169.99 -5.10 13.51 16 21 H -0.27 -4.60 7.11 56.52 0.40 -4.20 16 22 H -0.27 -4.48 7.11 56.52 0.40 -4.08 16 23 H -0.27 -4.62 7.11 56.52 0.40 -4.22 16 24 H 0.10 1.94 7.21 -52.48 -0.38 1.56 16 25 H 0.14 1.71 8.06 -52.49 -0.42 1.28 16 26 H 0.16 1.46 8.06 -52.49 -0.42 1.04 16 27 H 0.16 1.81 8.06 -52.49 -0.42 1.38 16 28 H 0.10 1.62 8.02 -52.49 -0.42 1.20 16 29 H 0.12 2.45 6.48 -52.49 -0.34 2.11 16 30 H 0.31 7.06 6.68 -40.82 -0.27 6.79 16 LS Contribution 291.83 15.07 4.40 4.40 Total: -1.00 -24.59 291.83 -7.65 -32.24 By element: Atomic # 1 Polarization: 6.42 SS G_CDS: -1.87 Total: 4.55 kcal Atomic # 6 Polarization: -13.02 SS G_CDS: -5.04 Total: -18.06 kcal Atomic # 7 Polarization: -35.75 SS G_CDS: 1.32 Total: -34.43 kcal Atomic # 14 Polarization: 18.61 SS G_CDS: -5.10 Total: 13.51 kcal Atomic # 17 Polarization: -0.85 SS G_CDS: -1.36 Total: -2.21 kcal Total LS contribution 4.40 Total: 4.40 kcal Total: -24.59 -7.65 -32.24 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001243385399.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 88.167 kcal (2) G-P(sol) polarization free energy of solvation -24.591 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 63.575 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.646 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.237 kcal (6) G-S(sol) free energy of system = (1) + (5) 55.929 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds