Wall clock time and date at job start Tue Mar 31 2020 06:04:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.35489 * 116.99626 * 2 1 4 4 C 1.39167 * 119.49687 * 180.02562 * 3 2 1 5 5 C 1.36939 * 119.43946 * 179.97438 * 4 3 2 6 6 C 1.40316 * 118.47733 * 359.73024 * 5 4 3 7 7 C 1.47395 * 120.50569 * 180.26521 * 6 5 4 8 8 O 1.21516 * 120.00037 * 180.27193 * 7 6 5 9 9 O 1.34756 * 120.00577 * 0.26934 * 7 6 5 10 10 C 1.45196 * 117.00657 * 179.97438 * 9 7 6 11 11 C 1.52998 * 109.47359 * 179.97438 * 10 9 7 12 12 C 1.50694 * 109.47056 * 180.02562 * 11 10 9 13 13 H 1.08002 * 120.00004 * 0.02562 * 12 11 10 14 14 C 1.37875 * 120.00018 * 180.02562 * 12 11 10 15 15 N 1.31517 * 120.00299 * 359.97438 * 14 12 11 16 16 Si 1.86810 * 120.00055 * 180.02562 * 14 12 11 17 17 H 1.48498 * 109.47054 * 359.97438 * 16 14 12 18 18 H 1.48495 * 109.47162 * 120.00081 * 16 14 12 19 19 H 1.48504 * 109.46960 * 239.99835 * 16 14 12 20 20 C 1.39790 * 118.98579 * 0.53115 * 6 5 4 21 21 Cl 1.73599 * 119.78023 * 179.73708 * 20 6 5 22 22 N 1.31829 * 120.44437 * 359.45568 * 20 6 5 23 23 H 1.09006 * 109.47111 * 179.97438 * 1 2 3 24 24 H 1.08998 * 109.47674 * 300.00566 * 1 2 3 25 25 H 1.09003 * 109.47067 * 60.00260 * 1 2 3 26 26 H 1.08005 * 120.28218 * 359.97438 * 4 3 2 27 27 H 1.07996 * 120.75697 * 179.97438 * 5 4 3 28 28 H 1.08995 * 109.47250 * 300.00513 * 10 9 7 29 29 H 1.09003 * 109.46679 * 60.00288 * 10 9 7 30 30 H 1.08995 * 109.47565 * 300.00573 * 11 10 9 31 31 H 1.09003 * 109.46782 * 60.00605 * 11 10 9 32 32 H 0.96998 * 120.00435 * 180.02562 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0440 1.2073 0.0000 4 6 3.4343 1.2680 -0.0005 5 6 4.0547 2.4888 -0.0011 6 6 3.2583 3.6440 -0.0069 7 6 3.8791 4.9808 -0.0135 8 8 3.1806 5.9751 -0.0135 9 8 5.2213 5.1004 -0.0196 10 6 5.7632 6.4475 -0.0266 11 6 7.2918 6.3824 -0.0322 12 6 7.8540 7.7805 -0.0387 13 1 7.1878 8.6305 -0.0385 14 6 9.2191 7.9745 -0.0451 15 7 10.0305 6.9395 -0.0448 16 14 9.9161 9.7077 -0.0525 17 1 8.8019 10.6893 -0.0509 18 1 10.7554 9.9088 1.1559 19 1 10.7452 9.9025 -1.2691 20 6 1.8671 3.5077 -0.0005 21 17 0.8620 4.9231 -0.0006 22 7 1.3131 2.3114 -0.0001 23 1 -0.3634 -1.0277 -0.0005 24 1 -0.3634 0.5139 0.8899 25 1 -0.3633 0.5138 -0.8900 26 1 4.0191 0.3599 -0.0005 27 1 5.1323 2.5607 -0.0011 28 1 5.4183 6.9733 -0.9169 29 1 5.4258 6.9793 0.8631 30 1 7.6363 5.8567 0.8583 31 1 7.6295 5.8504 -0.9216 32 1 10.9908 7.0759 -0.0489 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000910172732.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:04:07 Heat of formation + Delta-G solvation = -91.647404 kcal Electronic energy + Delta-G solvation = -19220.543167 eV Core-core repulsion = 15787.081568 eV Total energy + Delta-G solvation = -3433.461599 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 285.060 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -41.19514 -39.78976 -38.25927 -36.71000 -36.02822 -33.45346 -33.07686 -31.29618 -30.16554 -27.80290 -25.53269 -24.25929 -23.64337 -21.52086 -20.70026 -18.91692 -18.14625 -17.27005 -16.57086 -16.56981 -15.94544 -15.92974 -15.38056 -14.76125 -14.56614 -14.29854 -13.89880 -13.66123 -13.16840 -12.60795 -12.38406 -12.28372 -12.20623 -11.51788 -11.28937 -11.19655 -11.06386 -10.79014 -10.67153 -10.47706 -10.27585 -9.94699 -9.67332 -9.57692 -9.30022 -8.88791 -8.46385 -6.12516 -4.16606 0.25382 0.73970 1.52020 2.58939 2.59884 2.99512 3.26689 3.34424 3.39469 3.41833 4.00291 4.37025 4.45766 4.57738 4.76433 4.89963 4.94583 5.01659 5.24508 5.26619 5.50524 5.63900 5.85617 6.06882 6.08050 6.60926 6.63835 6.88783 7.13152 7.53084 7.59567 7.84251 8.11986 8.22570 8.89168 9.48080 10.99029 Molecular weight = 285.06amu Principal moments of inertia in cm(-1) A = 0.032648 B = 0.003281 C = 0.002990 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 857.438490 B = 8531.788619 C = 9363.464001 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.297 6.297 3 C 0.363 3.637 4 C -0.197 4.197 5 C 0.026 3.974 6 C -0.194 4.194 7 C 0.504 3.496 8 O -0.493 6.493 9 O -0.353 6.353 10 C 0.077 3.923 11 C 0.024 3.976 12 C -0.525 4.525 13 H 0.060 0.940 14 C 0.061 3.939 15 N -0.890 5.890 16 Si 0.899 3.101 17 H -0.271 1.271 18 H -0.282 1.282 19 H -0.282 1.282 20 C 0.266 3.734 21 Cl 0.016 6.984 22 N -0.544 5.544 23 H 0.100 0.900 24 H 0.063 0.937 25 H 0.063 0.937 26 H 0.158 0.842 27 H 0.171 0.829 28 H 0.061 0.939 29 H 0.061 0.939 30 H 0.029 0.971 31 H 0.029 0.971 32 H 0.263 0.737 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -17.220 -14.357 0.112 22.420 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.203 6.203 3 C 0.184 3.816 4 C -0.218 4.218 5 C 0.001 3.999 6 C -0.199 4.199 7 C 0.347 3.653 8 O -0.383 6.383 9 O -0.269 6.269 10 C 0.005 3.995 11 C -0.013 4.013 12 C -0.564 4.564 13 H 0.078 0.922 14 C -0.141 4.141 15 N -0.529 5.529 16 Si 0.726 3.274 17 H -0.196 1.196 18 H -0.208 1.208 19 H -0.208 1.208 20 C 0.102 3.898 21 Cl 0.046 6.954 22 N -0.271 5.271 23 H 0.119 0.881 24 H 0.082 0.918 25 H 0.082 0.918 26 H 0.176 0.824 27 H 0.189 0.811 28 H 0.079 0.921 29 H 0.079 0.921 30 H 0.047 0.953 31 H 0.047 0.953 32 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges -18.100 -14.307 0.111 23.072 hybrid contribution 0.858 1.259 -0.005 1.524 sum -17.242 -13.048 0.106 21.623 Atomic orbital electron populations 1.22991 0.76463 1.03453 1.03050 1.86251 1.23602 1.23761 1.86685 1.19936 0.89350 0.83812 0.88522 1.20926 0.91504 1.00305 1.09060 1.21622 1.02035 0.89266 0.86947 1.19736 0.92051 0.93888 1.14222 1.20429 0.82384 0.88281 0.74238 1.90898 1.63410 1.38902 1.45050 1.86542 1.20338 1.37122 1.82906 1.23694 0.97603 0.76981 1.01207 1.19181 0.85039 0.98165 0.98889 1.21011 0.91761 0.91548 1.52035 0.92163 1.24978 0.96965 0.97341 0.94857 1.69976 1.03358 1.29631 1.49901 0.86424 0.79099 0.84149 0.77704 1.19571 1.20830 1.20835 1.21399 0.87825 0.88281 0.92271 1.98477 1.68952 1.32769 1.95250 1.66757 1.40644 0.97455 1.22286 0.88130 0.91801 0.91812 0.82406 0.81112 0.92079 0.92084 0.95312 0.95312 0.92756 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.25 10.37 101.05 1.05 1.29 16 2 O -0.30 -2.84 10.46 -18.16 -0.19 -3.03 16 3 C 0.36 4.03 7.49 -16.95 -0.13 3.90 16 4 C -0.20 -1.93 9.97 -39.71 -0.40 -2.33 16 5 C 0.03 0.30 9.68 -39.27 -0.38 -0.08 16 6 C -0.19 -2.79 5.89 -104.81 -0.62 -3.40 16 7 C 0.50 8.86 7.89 34.46 0.27 9.13 16 8 O -0.49 -9.55 13.78 -19.28 -0.27 -9.81 16 9 O -0.35 -6.75 9.54 -40.64 -0.39 -7.13 16 10 C 0.08 1.67 5.41 37.16 0.20 1.87 16 11 C 0.02 0.62 5.35 -27.89 -0.15 0.47 16 12 C -0.53 -14.53 9.11 -34.44 -0.31 -14.84 16 13 H 0.06 1.62 7.74 -52.49 -0.41 1.21 16 14 C 0.06 1.70 5.46 -17.82 -0.10 1.60 16 15 N -0.89 -25.97 13.29 55.43 0.74 -25.23 16 16 Si 0.90 21.19 29.54 -169.99 -5.02 16.17 16 17 H -0.27 -6.28 7.11 56.52 0.40 -5.88 16 18 H -0.28 -6.57 7.11 56.52 0.40 -6.17 16 19 H -0.28 -6.58 7.11 56.52 0.40 -6.17 16 20 C 0.27 3.75 7.32 -16.97 -0.12 3.62 16 21 Cl 0.02 0.24 26.19 -51.86 -1.36 -1.12 16 22 N -0.54 -6.90 9.17 -10.04 -0.09 -6.99 16 23 H 0.10 0.42 8.14 -51.93 -0.42 -0.01 16 24 H 0.06 0.46 8.10 -51.93 -0.42 0.04 16 25 H 0.06 0.46 8.10 -51.93 -0.42 0.03 16 26 H 0.16 1.10 8.06 -52.48 -0.42 0.68 16 27 H 0.17 1.73 7.69 -52.49 -0.40 1.33 16 28 H 0.06 1.31 8.14 -51.93 -0.42 0.89 16 29 H 0.06 1.31 8.14 -51.93 -0.42 0.88 16 30 H 0.03 0.76 8.14 -51.93 -0.42 0.34 16 31 H 0.03 0.76 8.14 -51.93 -0.42 0.34 16 32 H 0.26 7.18 8.31 -40.82 -0.34 6.84 16 LS Contribution 305.92 15.07 4.61 4.61 Total: -1.00 -31.00 305.92 -5.97 -36.97 By element: Atomic # 1 Polarization: -2.33 SS G_CDS: -3.32 Total: -5.65 kcal Atomic # 6 Polarization: 1.91 SS G_CDS: -0.68 Total: 1.23 kcal Atomic # 7 Polarization: -32.87 SS G_CDS: 0.64 Total: -32.22 kcal Atomic # 8 Polarization: -19.14 SS G_CDS: -0.84 Total: -19.98 kcal Atomic # 14 Polarization: 21.19 SS G_CDS: -5.02 Total: 16.17 kcal Atomic # 17 Polarization: 0.24 SS G_CDS: -1.36 Total: -1.12 kcal Total LS contribution 4.61 Total: 4.61 kcal Total: -31.00 -5.97 -36.97 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000910172732.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.677 kcal (2) G-P(sol) polarization free energy of solvation -30.997 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -85.673 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.974 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.971 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.647 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds