Wall clock time and date at job start Tue Mar 31 2020 05:39:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 N 1.30833 * 125.88689 * 2 1 4 4 N 1.40087 * 108.23329 * 180.25241 * 3 2 1 5 5 C 1.46500 * 126.03497 * 179.74852 * 4 3 2 6 6 C 1.34986 * 107.92976 * 359.71702 * 4 3 2 7 7 Cl 1.73591 * 126.14171 * 179.97438 * 6 4 3 8 8 C 1.35467 * 107.71079 * 0.02562 * 6 4 3 9 9 C 1.50704 * 126.04421 * 180.02562 * 8 6 4 10 10 N 1.46897 * 109.47281 * 90.01983 * 9 8 6 11 11 C 1.46902 * 110.99971 * 169.99533 * 10 9 8 12 12 C 1.50697 * 109.47334 * 284.11697 * 11 10 9 13 13 H 1.07999 * 119.99860 * 4.74976 * 12 11 10 14 14 C 1.37881 * 120.00067 * 184.75597 * 12 11 10 15 15 N 1.31511 * 119.99662 * 359.97438 * 14 12 11 16 16 Si 1.86791 * 120.00031 * 179.97438 * 14 12 11 17 17 H 1.48507 * 109.47447 * 59.99674 * 16 14 12 18 18 H 1.48501 * 109.47145 * 179.97438 * 16 14 12 19 19 H 1.48505 * 109.47218 * 299.99695 * 16 14 12 20 20 C 1.46900 * 111.00329 * 293.95501 * 10 9 8 21 21 C 1.52993 * 109.47261 * 168.65330 * 20 10 9 22 22 C 1.53008 * 109.46711 * 288.65219 * 20 10 9 23 23 H 1.08990 * 109.47717 * 270.21631 * 1 2 3 24 24 H 1.09000 * 109.47164 * 30.22594 * 1 2 3 25 25 H 1.09005 * 109.46475 * 150.21570 * 1 2 3 26 26 H 1.08993 * 109.47438 * 269.96210 * 5 4 3 27 27 H 1.09005 * 109.47060 * 29.96527 * 5 4 3 28 28 H 1.09005 * 109.46759 * 149.95693 * 5 4 3 29 29 H 1.08997 * 109.47053 * 330.01562 * 9 8 6 30 30 H 1.09005 * 109.46529 * 210.02030 * 9 8 6 31 31 H 1.09000 * 109.47090 * 44.11732 * 11 10 9 32 32 H 1.08999 * 109.47060 * 164.11562 * 11 10 9 33 33 H 0.97002 * 119.99850 * 180.02562 * 15 14 12 34 34 H 1.08995 * 109.46946 * 48.64444 * 20 10 9 35 35 H 1.08997 * 109.47538 * 58.49714 * 21 20 10 36 36 H 1.08997 * 109.47140 * 178.49682 * 21 20 10 37 37 H 1.09004 * 109.47230 * 298.49116 * 21 20 10 38 38 H 1.09003 * 109.46981 * 59.99761 * 22 20 10 39 39 H 1.08996 * 109.46815 * 180.02562 * 22 20 10 40 40 H 1.09002 * 109.46731 * 299.99731 * 22 20 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2739 1.0600 0.0000 4 7 3.6088 0.6352 -0.0059 5 6 4.7893 1.5027 -0.0130 6 6 3.6154 -0.7147 -0.0030 7 17 5.0221 -1.7317 -0.0086 8 6 2.3269 -1.1330 0.0038 9 6 1.8598 -2.5658 0.0096 10 7 1.7138 -3.0277 1.3964 11 6 1.0384 -4.3312 1.4487 12 6 -0.4366 -4.1430 1.2041 13 1 -0.8217 -3.1661 0.9517 14 6 -1.2945 -5.2179 1.3027 15 7 -0.8254 -6.4075 1.6098 16 14 -3.1229 -4.9843 1.0003 17 1 -3.3360 -4.4807 -0.3805 18 1 -3.8221 -6.2839 1.1660 19 1 -3.6644 -4.0027 1.9742 20 6 3.0165 -3.0822 2.0731 21 6 2.8033 -3.2889 3.5739 22 6 3.8358 -4.2450 1.5094 23 1 -0.3634 0.0039 1.0275 24 1 -0.3633 0.8879 -0.5173 25 1 -0.3632 -0.8920 -0.5105 26 1 5.0775 1.7157 -1.0424 27 1 4.5574 2.4361 0.4999 28 1 5.6114 1.0018 0.4983 29 1 2.5912 -3.1884 -0.5057 30 1 0.8989 -2.6367 -0.5002 31 1 1.4530 -4.9863 0.6825 32 1 1.1895 -4.7796 2.4307 33 1 -1.4289 -7.1638 1.6788 34 1 3.5513 -2.1470 1.9074 35 1 2.2452 -4.2106 3.7382 36 1 3.7702 -3.3559 4.0725 37 1 2.2425 -2.4472 3.9806 38 1 3.9876 -4.0977 0.4401 39 1 4.8021 -4.2857 2.0119 40 1 3.3009 -5.1802 1.6751 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000042528662.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:39:21 Heat of formation + Delta-G solvation = 73.755962 kcal Electronic energy + Delta-G solvation = -21507.922001 eV Core-core repulsion = 18385.591771 eV Total energy + Delta-G solvation = -3122.330230 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 285.130 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -41.20428 -37.62192 -36.76742 -33.97728 -32.70552 -31.50289 -30.04134 -29.21523 -27.10475 -26.43584 -25.48109 -23.74049 -22.28633 -20.55280 -19.76452 -18.37270 -16.74969 -16.44354 -15.78618 -14.92464 -14.74111 -14.50996 -14.03344 -13.80777 -13.40611 -13.12644 -12.99876 -12.65078 -12.52988 -12.23090 -12.02582 -11.99081 -11.68539 -11.55340 -11.50904 -11.26275 -10.98979 -10.83085 -10.66480 -10.47702 -10.42275 -10.17293 -10.11731 -9.45473 -9.16092 -8.94969 -8.34495 -8.16080 -7.06591 -5.94522 -3.94760 1.57832 1.77262 2.72666 2.85925 3.38001 3.42413 3.44920 4.45336 4.49236 5.01076 5.05110 5.15732 5.25116 5.37212 5.41522 5.44830 5.64699 5.78912 5.83723 6.01620 6.06174 6.11617 6.19585 6.27419 6.32735 6.41604 6.53278 6.54286 6.58934 6.84927 6.87499 6.91214 6.94508 7.37641 7.47336 7.75824 7.91540 8.23469 8.34972 8.67318 9.12756 9.68693 11.15897 Molecular weight = 285.13amu Principal moments of inertia in cm(-1) A = 0.019175 B = 0.005923 C = 0.004907 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1459.866839 B = 4726.304668 C = 5704.750624 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 C 0.104 3.896 3 N -0.285 5.285 4 N -0.376 5.376 5 C 0.102 3.898 6 C 0.115 3.885 7 Cl -0.009 7.009 8 C -0.178 4.178 9 C 0.131 3.869 10 N -0.521 5.521 11 C 0.191 3.809 12 C -0.501 4.501 13 H 0.063 0.937 14 C 0.055 3.945 15 N -0.901 5.901 16 Si 0.894 3.106 17 H -0.278 1.278 18 H -0.290 1.290 19 H -0.277 1.277 20 C 0.075 3.925 21 C -0.139 4.139 22 C -0.182 4.182 23 H 0.085 0.915 24 H 0.066 0.934 25 H 0.086 0.914 26 H 0.073 0.927 27 H 0.091 0.909 28 H 0.084 0.916 29 H 0.032 0.968 30 H 0.092 0.908 31 H -0.010 1.010 32 H 0.038 0.962 33 H 0.260 0.740 34 H 0.065 0.935 35 H 0.063 0.937 36 H 0.041 0.959 37 H 0.054 0.946 38 H 0.051 0.949 39 H 0.043 0.957 40 H 0.063 0.937 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 11.360 11.884 -3.040 16.718 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.130 4.130 2 C -0.061 4.061 3 N -0.109 5.109 4 N -0.162 5.162 5 C -0.039 4.039 6 C -0.038 4.038 7 Cl 0.019 6.981 8 C -0.190 4.190 9 C 0.003 3.997 10 N -0.245 5.245 11 C 0.066 3.934 12 C -0.540 4.540 13 H 0.081 0.919 14 C -0.146 4.146 15 N -0.541 5.541 16 Si 0.722 3.278 17 H -0.203 1.203 18 H -0.216 1.216 19 H -0.202 1.202 20 C -0.035 4.035 21 C -0.196 4.196 22 C -0.241 4.241 23 H 0.103 0.897 24 H 0.085 0.915 25 H 0.105 0.895 26 H 0.092 0.908 27 H 0.110 0.890 28 H 0.103 0.897 29 H 0.050 0.950 30 H 0.110 0.890 31 H 0.008 0.992 32 H 0.056 0.944 33 H 0.070 0.930 34 H 0.083 0.917 35 H 0.082 0.918 36 H 0.060 0.940 37 H 0.073 0.927 38 H 0.070 0.930 39 H 0.062 0.938 40 H 0.082 0.918 Dipole moment (debyes) X Y Z Total from point charges 11.307 13.290 -2.754 17.665 hybrid contribution -0.052 -1.504 -0.519 1.592 sum 11.255 11.787 -3.273 16.623 Atomic orbital electron populations 1.20227 0.85746 1.03126 1.03875 1.22172 0.97259 0.89347 0.97367 1.77425 0.84951 1.21853 1.26682 1.48355 1.06138 1.02595 1.59085 1.21822 0.83939 0.94899 1.03288 1.21456 0.90160 0.83634 1.08552 1.98383 1.38581 1.64196 1.96965 1.19869 0.88864 0.98107 1.12205 1.20327 1.00629 0.87099 0.91683 1.62344 1.17305 1.31893 1.12924 1.19777 0.93232 0.83416 0.96932 1.21169 0.91835 0.94799 1.46161 0.91921 1.24958 0.98685 0.95221 0.95703 1.69944 1.35101 0.99732 1.49285 0.86635 0.85376 0.77104 0.78714 1.20323 1.21580 1.20241 1.21660 0.90567 0.96735 0.94504 1.21798 0.99999 1.02722 0.95121 1.22491 0.99791 1.01026 1.00761 0.89687 0.91502 0.89488 0.90808 0.89035 0.89732 0.95000 0.88998 0.99214 0.94376 0.93049 0.91656 0.91784 0.93953 0.92704 0.93034 0.93827 0.91811 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -1.05 10.26 36.01 0.37 -0.68 16 2 C 0.10 1.75 7.22 -82.41 -0.59 1.16 16 3 N -0.29 -4.66 12.57 33.67 0.42 -4.23 16 4 N -0.38 -5.43 4.01 -64.91 -0.26 -5.69 16 5 C 0.10 0.96 11.31 59.85 0.68 1.64 16 6 C 0.11 1.78 6.39 -17.15 -0.11 1.67 16 7 Cl -0.01 -0.12 24.57 -51.86 -1.27 -1.40 16 8 C -0.18 -3.09 5.02 -105.00 -0.53 -3.62 16 9 C 0.13 2.53 4.81 -4.98 -0.02 2.51 16 10 N -0.52 -10.97 4.35 -229.52 -1.00 -11.97 16 11 C 0.19 4.78 3.31 -4.98 -0.02 4.77 16 12 C -0.50 -13.55 8.62 -34.44 -0.30 -13.85 16 13 H 0.06 1.66 7.67 -52.49 -0.40 1.25 16 14 C 0.06 1.53 5.46 -17.82 -0.10 1.43 16 15 N -0.90 -26.31 13.29 55.43 0.74 -25.58 16 16 Si 0.89 21.27 29.54 -169.99 -5.02 16.25 16 17 H -0.28 -6.46 7.11 56.52 0.40 -6.06 16 18 H -0.29 -6.91 7.11 56.52 0.40 -6.51 16 19 H -0.28 -6.52 7.11 56.52 0.40 -6.12 16 20 C 0.07 1.38 2.46 -67.71 -0.17 1.21 16 21 C -0.14 -2.50 9.22 37.15 0.34 -2.16 16 22 C -0.18 -3.18 7.66 37.16 0.28 -2.90 16 23 H 0.08 1.27 8.14 -51.93 -0.42 0.85 16 24 H 0.07 0.84 8.14 -51.93 -0.42 0.42 16 25 H 0.09 1.31 7.25 -51.93 -0.38 0.93 16 26 H 0.07 0.58 8.14 -51.93 -0.42 0.16 16 27 H 0.09 0.75 8.14 -51.93 -0.42 0.33 16 28 H 0.08 0.67 7.81 -51.93 -0.41 0.27 16 29 H 0.03 0.61 6.23 -51.93 -0.32 0.29 16 30 H 0.09 1.87 6.44 -51.93 -0.33 1.53 16 31 H -0.01 -0.27 7.33 -51.93 -0.38 -0.65 16 32 H 0.04 1.03 5.88 -51.93 -0.31 0.72 16 33 H 0.26 7.26 8.31 -40.82 -0.34 6.92 16 34 H 0.07 1.17 4.66 -51.93 -0.24 0.92 16 35 H 0.06 1.27 6.26 -51.93 -0.32 0.95 16 36 H 0.04 0.65 8.14 -51.93 -0.42 0.22 16 37 H 0.05 0.99 8.14 -51.93 -0.42 0.57 16 38 H 0.05 0.88 5.50 -51.93 -0.29 0.60 16 39 H 0.04 0.66 8.14 -51.93 -0.42 0.24 16 40 H 0.06 1.25 6.72 -51.93 -0.35 0.90 16 LS Contribution 328.41 15.07 4.95 4.95 Total: -1.00 -30.32 328.41 -7.43 -37.75 By element: Atomic # 1 Polarization: 4.56 SS G_CDS: -5.82 Total: -1.27 kcal Atomic # 6 Polarization: -8.66 SS G_CDS: -0.16 Total: -8.82 kcal Atomic # 7 Polarization: -47.36 SS G_CDS: -0.10 Total: -47.46 kcal Atomic # 14 Polarization: 21.27 SS G_CDS: -5.02 Total: 16.25 kcal Atomic # 17 Polarization: -0.12 SS G_CDS: -1.27 Total: -1.40 kcal Total LS contribution 4.95 Total: 4.95 kcal Total: -30.32 -7.43 -37.75 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000042528662.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 111.506 kcal (2) G-P(sol) polarization free energy of solvation -30.322 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 81.185 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.429 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.750 kcal (6) G-S(sol) free energy of system = (1) + (5) 73.756 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds