Wall clock time and date at job start Tue Mar 31 2020 05:42:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 N 1.40072 * 126.03526 * 2 1 4 4 C 1.30839 * 108.23665 * 179.75719 * 3 2 1 5 5 C 1.39857 * 108.21765 * 0.43773 * 4 3 2 6 6 C 1.50707 * 126.05286 * 179.82243 * 5 4 3 7 7 N 1.46902 * 109.46656 * 259.69041 * 6 5 4 8 8 C 1.46906 * 110.99573 * 179.97438 * 7 6 5 9 9 C 1.52998 * 109.47020 * 179.97438 * 8 7 6 10 10 C 1.53000 * 109.47381 * 300.00339 * 9 8 7 11 11 C 1.53010 * 109.47013 * 60.00056 * 9 8 7 12 12 C 1.52996 * 109.47077 * 179.97438 * 9 8 7 13 13 C 1.50699 * 109.47047 * 180.02562 * 12 9 8 14 14 H 1.07999 * 120.00136 * 0.02562 * 13 12 9 15 15 C 1.37876 * 120.00116 * 180.02562 * 13 12 9 16 16 N 1.31512 * 120.00112 * 0.02562 * 15 13 12 17 17 Si 1.86798 * 120.00300 * 179.97438 * 15 13 12 18 18 H 1.48504 * 109.47104 * 60.00043 * 17 15 13 19 19 H 1.48496 * 109.47638 * 180.02562 * 17 15 13 20 20 H 1.48499 * 109.47155 * 300.00196 * 17 15 13 21 21 C 1.34986 * 126.03461 * 180.02562 * 2 1 3 22 22 Cl 1.73607 * 126.14313 * 359.93751 * 21 2 1 23 23 H 1.09006 * 109.47133 * 269.95571 * 1 2 3 24 24 H 1.09000 * 109.47433 * 29.95717 * 1 2 3 25 25 H 1.09007 * 109.47369 * 149.95960 * 1 2 3 26 26 H 1.08003 * 125.89174 * 180.25670 * 4 3 2 27 27 H 1.08990 * 109.47142 * 139.69025 * 6 5 4 28 28 H 1.09004 * 109.46726 * 19.68923 * 6 5 4 29 29 H 1.00896 * 111.00219 * 303.95295 * 7 6 5 30 30 H 1.09002 * 109.46991 * 299.99841 * 8 7 6 31 31 H 1.09000 * 109.47202 * 60.00133 * 8 7 6 32 32 H 1.09002 * 109.47185 * 59.99218 * 10 9 8 33 33 H 1.08994 * 109.47063 * 180.02562 * 10 9 8 34 34 H 1.09008 * 109.46699 * 300.00074 * 10 9 8 35 35 H 1.08992 * 109.46866 * 59.99807 * 11 9 8 36 36 H 1.09000 * 109.46687 * 179.97438 * 11 9 8 37 37 H 1.09002 * 109.47213 * 300.00043 * 11 9 8 38 38 H 1.08993 * 109.47277 * 299.99937 * 12 9 8 39 39 H 1.09000 * 109.47041 * 60.00238 * 12 9 8 40 40 H 0.96998 * 120.00461 * 180.02562 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.2890 1.1327 0.0000 4 6 3.5348 0.7328 0.0053 5 6 3.5450 -0.6657 -0.0014 6 6 4.7700 -1.5437 -0.0023 7 7 5.0271 -2.0239 -1.3666 8 6 6.2170 -2.8845 -1.4062 9 6 6.4517 -3.3645 -2.8398 10 6 5.2333 -4.1565 -3.3185 11 6 6.6656 -2.1561 -3.7537 12 6 7.6914 -4.2602 -2.8812 13 6 7.9230 -4.7325 -4.2934 14 1 7.2532 -4.4243 -5.0826 15 6 8.9899 -5.5582 -4.5780 16 7 9.8052 -5.9340 -3.6170 17 14 9.2765 -6.1442 -6.3284 18 1 9.4840 -4.9713 -7.2154 19 1 10.4790 -7.0145 -6.3685 20 1 8.0940 -6.9130 -6.7929 21 6 2.2591 -1.0916 -0.0005 22 17 1.7277 -2.7443 0.0003 23 1 -0.3634 -0.0008 1.0277 24 1 -0.3634 0.8903 -0.5132 25 1 -0.3634 -0.8897 -0.5145 26 1 4.4051 1.3723 0.0106 27 1 4.6070 -2.3954 0.6580 28 1 5.6280 -0.9706 0.3490 29 1 4.2212 -2.5033 -1.7391 30 1 7.0849 -2.3203 -1.0648 31 1 6.0645 -3.7456 -0.7555 32 1 4.3504 -3.5180 -3.2890 33 1 5.4008 -4.4988 -4.3396 34 1 5.0810 -5.0174 -2.6674 35 1 7.5335 -1.5919 -3.4127 36 1 6.8333 -2.4981 -4.7750 37 1 5.7827 -1.5175 -3.7243 38 1 8.5592 -3.6956 -2.5405 39 1 7.5395 -5.1211 -2.2301 40 1 10.5560 -6.5146 -3.8173 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000815141281.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:42:57 Heat of formation + Delta-G solvation = 57.682701 kcal Electronic energy + Delta-G solvation = -20293.485011 eV Core-core repulsion = 17170.457792 eV Total energy + Delta-G solvation = -3123.027219 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 285.130 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -41.48988 -37.61172 -37.10700 -34.82880 -33.29383 -32.16136 -30.24200 -27.80745 -26.84645 -26.27158 -25.49597 -23.86210 -22.05654 -21.46512 -20.52995 -17.97430 -17.27084 -16.19000 -16.04044 -15.40624 -14.85949 -14.65218 -14.42599 -14.10908 -13.73161 -13.24871 -13.18853 -13.00247 -12.65863 -12.45775 -12.22960 -11.96897 -11.91901 -11.76585 -11.44492 -10.96987 -10.86214 -10.77074 -10.73930 -10.43526 -10.20454 -10.09154 -9.62660 -9.55702 -9.02036 -8.81666 -8.64582 -8.27714 -7.97036 -5.92520 -3.92393 1.22883 1.39944 2.39437 2.46868 3.37244 3.41731 3.44140 4.16083 4.50800 4.72709 4.77044 4.80792 4.98780 5.04233 5.18316 5.43175 5.45133 5.71850 5.74732 5.83272 5.95381 6.05107 6.29736 6.32286 6.39688 6.43012 6.57428 6.73044 6.85115 6.88712 7.26281 7.29213 7.30603 7.32281 7.46822 7.72906 7.76777 7.91157 8.08187 8.52949 9.12900 9.70132 11.19159 Molecular weight = 285.13amu Principal moments of inertia in cm(-1) A = 0.032649 B = 0.003276 C = 0.003195 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 857.407714 B = 8545.476229 C = 8762.517931 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.097 3.903 2 N -0.370 5.370 3 N -0.278 5.278 4 C 0.074 3.926 5 C -0.197 4.197 6 C 0.131 3.869 7 N -0.681 5.681 8 C 0.069 3.931 9 C -0.058 4.058 10 C -0.129 4.129 11 C -0.115 4.115 12 C 0.034 3.966 13 C -0.507 4.507 14 H 0.058 0.942 15 C 0.055 3.945 16 N -0.898 5.898 17 Si 0.887 3.113 18 H -0.277 1.277 19 H -0.289 1.289 20 H -0.278 1.278 21 C 0.122 3.878 22 Cl -0.004 7.004 23 H 0.077 0.923 24 H 0.094 0.906 25 H 0.088 0.912 26 H 0.193 0.807 27 H 0.035 0.965 28 H 0.083 0.917 29 H 0.337 0.663 30 H 0.068 0.932 31 H 0.023 0.977 32 H 0.032 0.968 33 H 0.063 0.937 34 H 0.039 0.961 35 H 0.039 0.961 36 H 0.053 0.947 37 H 0.042 0.958 38 H 0.015 0.985 39 H 0.012 0.988 40 H 0.259 0.741 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -17.968 10.565 9.573 22.937 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.044 4.044 2 N -0.155 5.155 3 N -0.100 5.100 4 C -0.111 4.111 5 C -0.210 4.210 6 C 0.001 3.999 7 N -0.313 5.313 8 C -0.059 4.059 9 C -0.059 4.059 10 C -0.186 4.186 11 C -0.173 4.173 12 C -0.003 4.003 13 C -0.545 4.545 14 H 0.076 0.924 15 C -0.146 4.146 16 N -0.538 5.538 17 Si 0.715 3.285 18 H -0.203 1.203 19 H -0.215 1.215 20 H -0.204 1.204 21 C -0.032 4.032 22 Cl 0.024 6.976 23 H 0.096 0.904 24 H 0.113 0.887 25 H 0.106 0.894 26 H 0.210 0.790 27 H 0.053 0.947 28 H 0.102 0.898 29 H 0.156 0.844 30 H 0.086 0.914 31 H 0.042 0.958 32 H 0.051 0.949 33 H 0.082 0.918 34 H 0.059 0.941 35 H 0.059 0.941 36 H 0.072 0.928 37 H 0.061 0.939 38 H 0.034 0.966 39 H 0.031 0.969 40 H 0.069 0.931 Dipole moment (debyes) X Y Z Total from point charges -18.465 11.871 9.422 23.888 hybrid contribution 0.292 -2.120 -0.514 2.201 sum -18.173 9.751 8.907 22.465 Atomic orbital electron populations 1.21932 0.73832 1.04938 1.03701 1.48534 1.06840 1.02387 1.57713 1.77527 1.01834 1.05799 1.24873 1.23755 0.95237 0.93894 0.98259 1.19771 0.92475 0.94569 1.14210 1.20208 0.93151 0.95625 0.90930 1.60638 1.07640 1.43773 1.19288 1.22125 0.91964 0.93693 0.98129 1.20626 0.97485 0.95974 0.91781 1.21766 0.96164 0.98391 1.02283 1.21593 0.99611 0.96491 0.99581 1.19113 0.90749 0.93475 0.96968 1.21214 1.10653 1.28459 0.94164 0.92368 1.25007 0.96295 0.96575 0.96690 1.69953 1.16108 1.35964 1.31796 0.86737 0.77465 0.78709 0.85552 1.20311 1.21475 1.20397 1.21531 0.91374 0.83019 1.07298 1.98420 1.90584 1.11629 1.96984 0.90404 0.88689 0.89364 0.78982 0.94712 0.89835 0.84354 0.91387 0.95846 0.94913 0.91776 0.94139 0.94137 0.92816 0.93897 0.96645 0.96935 0.93141 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 0.65 11.31 59.85 0.68 1.33 16 2 N -0.37 -4.02 4.01 -64.90 -0.26 -4.28 16 3 N -0.28 -3.39 12.57 30.62 0.39 -3.01 16 4 C 0.07 0.85 11.96 -17.37 -0.21 0.64 16 5 C -0.20 -2.38 5.62 -105.00 -0.59 -2.97 16 6 C 0.13 1.64 5.95 -4.97 -0.03 1.61 16 7 N -0.68 -10.08 5.70 -115.05 -0.66 -10.74 16 8 C 0.07 1.20 4.65 -3.82 -0.02 1.18 16 9 C -0.06 -1.17 0.60 -154.51 -0.09 -1.26 16 10 C -0.13 -2.44 7.89 37.16 0.29 -2.14 16 11 C -0.12 -2.27 8.06 37.16 0.30 -1.97 16 12 C 0.03 0.87 4.04 -27.89 -0.11 0.76 16 13 C -0.51 -13.92 7.65 -34.44 -0.26 -14.19 16 14 H 0.06 1.56 5.68 -52.49 -0.30 1.26 16 15 C 0.05 1.56 5.46 -17.82 -0.10 1.46 16 16 N -0.90 -26.96 13.29 55.43 0.74 -26.23 16 17 Si 0.89 21.71 29.54 -169.99 -5.02 16.69 16 18 H -0.28 -6.69 7.11 56.52 0.40 -6.29 16 19 H -0.29 -7.05 7.11 56.52 0.40 -6.64 16 20 H -0.28 -6.69 7.11 56.52 0.40 -6.29 16 21 C 0.12 1.40 7.45 -17.16 -0.13 1.27 16 22 Cl 0.00 -0.04 28.53 -51.86 -1.48 -1.52 16 23 H 0.08 0.40 8.14 -51.93 -0.42 -0.02 16 24 H 0.09 0.53 8.14 -51.93 -0.42 0.11 16 25 H 0.09 0.48 7.81 -51.93 -0.41 0.07 16 26 H 0.19 1.66 8.06 -52.48 -0.42 1.24 16 27 H 0.03 0.44 8.14 -51.93 -0.42 0.01 16 28 H 0.08 0.98 8.14 -51.93 -0.42 0.55 16 29 H 0.34 5.03 6.76 -39.29 -0.27 4.77 16 30 H 0.07 1.19 8.14 -51.93 -0.42 0.76 16 31 H 0.02 0.41 8.14 -51.93 -0.42 -0.01 16 32 H 0.03 0.54 6.57 -51.93 -0.34 0.20 16 33 H 0.06 1.31 6.62 -51.93 -0.34 0.97 16 34 H 0.04 0.76 8.14 -51.92 -0.42 0.33 16 35 H 0.04 0.79 8.14 -51.93 -0.42 0.37 16 36 H 0.05 1.13 6.61 -51.93 -0.34 0.78 16 37 H 0.04 0.77 7.60 -51.93 -0.39 0.37 16 38 H 0.02 0.42 8.14 -51.93 -0.42 -0.01 16 39 H 0.01 0.34 8.14 -51.93 -0.42 -0.09 16 40 H 0.26 7.40 8.31 -40.82 -0.34 7.06 16 LS Contribution 341.05 15.07 5.14 5.14 Total: -1.00 -31.11 341.05 -7.60 -38.72 By element: Atomic # 1 Polarization: 5.70 SS G_CDS: -6.18 Total: -0.48 kcal Atomic # 6 Polarization: -14.02 SS G_CDS: -0.27 Total: -14.29 kcal Atomic # 7 Polarization: -44.45 SS G_CDS: 0.20 Total: -44.25 kcal Atomic # 14 Polarization: 21.71 SS G_CDS: -5.02 Total: 16.69 kcal Atomic # 17 Polarization: -0.04 SS G_CDS: -1.48 Total: -1.52 kcal Total LS contribution 5.14 Total: 5.14 kcal Total: -31.11 -7.60 -38.72 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000815141281.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 96.398 kcal (2) G-P(sol) polarization free energy of solvation -31.113 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 65.286 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.603 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.716 kcal (6) G-S(sol) free energy of system = (1) + (5) 57.683 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds