Wall clock time and date at job start Tue Mar 31 2020 06:13:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.46498 * 120.00153 * 2 1 4 4 C 1.50709 * 109.47258 * 270.00255 * 3 2 1 5 5 H 1.07999 * 119.99767 * 359.97438 * 4 3 2 6 6 C 1.37870 * 120.00128 * 179.97438 * 4 3 2 7 7 N 1.31522 * 119.99998 * 359.97438 * 6 4 3 8 8 Si 1.86794 * 120.00053 * 179.97438 * 6 4 3 9 9 H 1.48497 * 109.47043 * 90.00321 * 8 6 4 10 10 H 1.48505 * 109.47467 * 210.00229 * 8 6 4 11 11 H 1.48497 * 109.47174 * 330.00336 * 8 6 4 12 12 C 1.34782 * 119.99826 * 179.97438 * 2 1 3 13 13 O 1.21591 * 119.99283 * 179.97438 * 12 2 1 14 14 N 1.34771 * 120.00155 * 0.02562 * 12 2 1 15 15 C 1.40003 * 120.00098 * 184.46434 * 14 12 2 16 16 C 1.38879 * 120.05773 * 325.29188 * 15 14 12 17 17 C 1.38117 * 119.98683 * 179.74238 * 16 15 14 18 18 C 1.38271 * 120.11314 * 0.53158 * 17 16 15 19 19 C 1.38471 * 120.12445 * 359.72102 * 18 17 16 20 20 F 1.35095 * 119.99832 * 179.97438 * 19 18 17 21 21 C 1.38449 * 120.00654 * 0.02562 * 19 18 17 22 22 Cl 1.73598 * 120.05551 * 179.97438 * 21 19 18 23 23 H 1.08994 * 109.47226 * 269.99540 * 1 2 3 24 24 H 1.09001 * 109.46930 * 30.00278 * 1 2 3 25 25 H 1.08999 * 109.47019 * 150.00053 * 1 2 3 26 26 H 1.09007 * 109.46688 * 29.99811 * 3 2 1 27 27 H 1.08998 * 109.47391 * 149.99778 * 3 2 1 28 28 H 0.96994 * 119.99769 * 179.97438 * 7 6 4 29 29 H 0.97003 * 120.00147 * 4.73575 * 14 12 2 30 30 H 1.08001 * 120.00124 * 359.97438 * 16 15 14 31 31 H 1.07999 * 119.94358 * 180.22797 * 17 16 15 32 32 H 1.08006 * 119.93655 * 179.74265 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2687 0.0000 4 6 2.4487 1.7038 -1.4209 5 1 2.0981 1.0958 -2.2417 6 6 3.1260 2.8779 -1.6728 7 7 3.5525 3.6186 -0.6731 8 14 3.4379 3.4169 -3.4339 9 1 2.3078 4.2592 -3.9013 10 1 4.6979 4.2003 -3.4961 11 1 3.5560 2.2196 -4.3044 12 6 2.1389 -1.1673 0.0005 13 8 3.3548 -1.1672 0.0001 14 7 1.4650 -2.3344 0.0005 15 6 2.1618 -3.5450 0.0954 16 6 3.4089 -3.6785 -0.5011 17 6 4.0973 -4.8718 -0.4020 18 6 3.5423 -5.9382 0.2811 19 6 2.2969 -5.8120 0.8731 20 9 1.7569 -6.8557 1.5394 21 6 1.6047 -4.6165 0.7814 22 17 0.0430 -4.4570 1.5226 23 1 -0.3633 -0.0001 1.0276 24 1 -0.3633 0.8900 -0.5139 25 1 -0.3633 -0.8900 -0.5138 26 1 1.6084 2.0284 0.5139 27 1 3.1499 1.1384 0.5138 28 1 4.0293 4.4444 -0.8504 29 1 0.4975 -2.3359 -0.0692 30 1 3.8418 -2.8481 -1.0391 31 1 5.0686 -4.9736 -0.8630 32 1 4.0814 -6.8713 0.3532 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000334372305.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:13:52 Heat of formation + Delta-G solvation = -41.893389 kcal Electronic energy + Delta-G solvation = -19973.265519 eV Core-core repulsion = 16488.908294 eV Total energy + Delta-G solvation = -3484.357224 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 286.063 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -49.04149 -40.43435 -38.52065 -36.63159 -35.12747 -34.50374 -32.60833 -30.49334 -29.59966 -27.72553 -25.91568 -23.67732 -22.98521 -22.14495 -19.68663 -18.41800 -17.48911 -16.76023 -16.60778 -16.26323 -15.82821 -15.71513 -14.92479 -14.76528 -14.37557 -14.04144 -13.53009 -13.36814 -12.99121 -12.70736 -12.37046 -12.22897 -11.95597 -11.78423 -11.61338 -11.26662 -11.08089 -10.96519 -10.62877 -10.31408 -10.18572 -9.72105 -9.41604 -8.75945 -8.48330 -8.24773 -7.73086 -6.09064 -4.14297 0.90593 1.05326 1.89685 2.90582 3.27175 3.33041 3.34515 3.38595 3.78208 4.06458 4.30351 4.44590 4.68306 4.80279 5.17424 5.22367 5.25515 5.43836 5.59348 5.78745 5.89036 6.02520 6.11135 6.27080 6.46269 6.63536 6.87859 7.24800 7.39084 7.53410 7.87602 8.16258 8.41060 8.85095 9.06656 9.51111 10.98888 Molecular weight = 286.06amu Principal moments of inertia in cm(-1) A = 0.027576 B = 0.004243 C = 0.003853 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1015.119666 B = 6598.095284 C = 7264.941783 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.082 3.918 2 N -0.607 5.607 3 C 0.259 3.741 4 C -0.529 4.529 5 H 0.058 0.942 6 C 0.062 3.938 7 N -0.894 5.894 8 Si 0.899 3.101 9 H -0.280 1.280 10 H -0.285 1.285 11 H -0.274 1.274 12 C 0.699 3.301 13 O -0.564 6.564 14 N -0.691 5.691 15 C 0.222 3.778 16 C -0.122 4.122 17 C -0.065 4.065 18 C -0.170 4.170 19 C 0.125 3.875 20 F -0.130 7.130 21 C -0.117 4.117 22 Cl -0.053 7.053 23 H 0.048 0.952 24 H 0.081 0.919 25 H 0.049 0.951 26 H 0.036 0.964 27 H 0.047 0.953 28 H 0.264 0.736 29 H 0.406 0.594 30 H 0.162 0.838 31 H 0.142 0.858 32 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.538 -16.907 1.993 17.902 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 N -0.342 5.342 3 C 0.140 3.860 4 C -0.568 4.568 5 H 0.076 0.924 6 C -0.140 4.140 7 N -0.533 5.533 8 Si 0.727 3.273 9 H -0.206 1.206 10 H -0.211 1.211 11 H -0.199 1.199 12 C 0.401 3.599 13 O -0.440 6.440 14 N -0.341 5.341 15 C 0.122 3.878 16 C -0.142 4.142 17 C -0.084 4.084 18 C -0.191 4.191 19 C 0.104 3.896 20 F -0.108 7.108 21 C -0.148 4.148 22 Cl -0.024 7.024 23 H 0.066 0.934 24 H 0.100 0.900 25 H 0.068 0.932 26 H 0.054 0.946 27 H 0.065 0.935 28 H 0.074 0.926 29 H 0.244 0.756 30 H 0.180 0.820 31 H 0.159 0.841 32 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -4.757 -16.559 2.147 17.362 hybrid contribution -0.710 0.235 -0.755 1.063 sum -5.467 -16.324 1.392 17.271 Atomic orbital electron populations 1.21635 0.81447 1.02470 1.00700 1.47523 1.05889 1.06189 1.74584 1.19309 0.92430 0.76628 0.97650 1.21431 1.36764 1.06352 0.92243 0.92420 1.24923 0.95276 0.96332 0.97473 1.69930 1.38271 1.14307 1.30758 0.86483 0.77710 0.78589 0.84547 1.20647 1.21054 1.19910 1.15861 0.85534 0.79897 0.78573 1.90889 1.11143 1.85357 1.56647 1.43047 1.10513 1.03335 1.77210 1.17062 0.92925 0.84120 0.93649 1.21617 0.93792 0.99087 0.99738 1.21041 0.99735 0.91321 0.96343 1.21045 0.94344 1.01420 1.02242 1.17044 0.92837 0.83129 0.96564 1.91517 1.85810 1.55384 1.78089 1.20708 0.91741 0.95972 1.06388 1.98358 1.25047 1.97897 1.81128 0.93357 0.89975 0.93215 0.94582 0.93514 0.92635 0.75573 0.82045 0.84055 0.84069 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 1.24 10.24 59.85 0.61 1.85 16 2 N -0.61 -12.52 2.86 -188.73 -0.54 -13.06 16 3 C 0.26 6.56 5.16 -5.19 -0.03 6.53 16 4 C -0.53 -14.54 9.39 -34.44 -0.32 -14.86 16 5 H 0.06 1.58 7.81 -52.49 -0.41 1.17 16 6 C 0.06 1.73 5.46 -17.82 -0.10 1.64 16 7 N -0.89 -25.97 13.29 55.43 0.74 -25.23 16 8 Si 0.90 21.35 29.54 -169.99 -5.02 16.33 16 9 H -0.28 -6.48 7.11 56.52 0.40 -6.08 16 10 H -0.28 -6.73 7.11 56.52 0.40 -6.33 16 11 H -0.27 -6.49 7.11 56.52 0.40 -6.09 16 12 C 0.70 14.34 8.12 -86.92 -0.71 13.63 16 13 O -0.56 -13.55 13.34 5.29 0.07 -13.47 16 14 N -0.69 -11.10 4.93 -14.20 -0.07 -11.17 16 15 C 0.22 3.37 6.30 -83.65 -0.53 2.84 16 16 C -0.12 -1.81 8.70 -39.39 -0.34 -2.15 16 17 C -0.07 -0.75 10.04 -39.61 -0.40 -1.15 16 18 C -0.17 -1.84 10.02 -39.48 -0.40 -2.24 16 19 C 0.12 1.57 7.27 -39.42 -0.29 1.29 16 20 F -0.13 -1.63 16.84 2.25 0.04 -1.59 16 21 C -0.12 -1.60 6.34 -39.26 -0.25 -1.85 16 22 Cl -0.05 -0.67 27.61 -51.86 -1.43 -2.10 16 23 H 0.05 0.64 8.14 -51.93 -0.42 0.22 16 24 H 0.08 1.26 8.07 -51.93 -0.42 0.84 16 25 H 0.05 0.61 6.30 -51.93 -0.33 0.28 16 26 H 0.04 0.92 8.07 -51.92 -0.42 0.50 16 27 H 0.05 1.34 7.42 -51.93 -0.39 0.95 16 28 H 0.26 7.25 8.31 -40.82 -0.34 6.91 16 29 H 0.41 5.50 5.77 -40.82 -0.24 5.27 16 30 H 0.16 2.78 6.20 -52.49 -0.33 2.46 16 31 H 0.14 1.23 8.06 -52.49 -0.42 0.80 16 32 H 0.14 1.13 8.06 -52.48 -0.42 0.71 16 LS Contribution 298.96 15.07 4.51 4.51 Total: -1.00 -31.26 298.96 -7.38 -38.63 By element: Atomic # 1 Polarization: 4.55 SS G_CDS: -2.92 Total: 1.62 kcal Atomic # 6 Polarization: 8.27 SS G_CDS: -2.74 Total: 5.53 kcal Atomic # 7 Polarization: -49.59 SS G_CDS: 0.13 Total: -49.46 kcal Atomic # 8 Polarization: -13.55 SS G_CDS: 0.07 Total: -13.47 kcal Atomic # 9 Polarization: -1.63 SS G_CDS: 0.04 Total: -1.59 kcal Atomic # 14 Polarization: 21.35 SS G_CDS: -5.02 Total: 16.33 kcal Atomic # 17 Polarization: -0.67 SS G_CDS: -1.43 Total: -2.10 kcal Total LS contribution 4.51 Total: 4.51 kcal Total: -31.26 -7.38 -38.63 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000334372305.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -3.261 kcal (2) G-P(sol) polarization free energy of solvation -31.257 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.518 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.375 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.632 kcal (6) G-S(sol) free energy of system = (1) + (5) -41.893 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds