Wall clock time and date at job start Tue Mar 31 2020 06:12:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52992 * 1 3 3 N 1.46497 * 109.47273 * 2 1 4 4 C 1.46495 * 120.00376 * 79.58919 * 3 2 1 5 5 C 1.50704 * 109.47008 * 90.00119 * 4 3 2 6 6 H 1.07992 * 120.00326 * 0.02562 * 5 4 3 7 7 C 1.37885 * 119.99748 * 180.02562 * 5 4 3 8 8 N 1.31510 * 120.00267 * 359.97438 * 7 5 4 9 9 Si 1.86796 * 119.99822 * 180.02562 * 7 5 4 10 10 H 1.48502 * 109.47255 * 89.99674 * 9 7 5 11 11 H 1.48497 * 109.47323 * 209.99897 * 9 7 5 12 12 H 1.48508 * 109.47100 * 329.99712 * 9 7 5 13 13 C 1.34783 * 119.99678 * 259.58982 * 3 2 1 14 14 O 1.21535 * 119.99502 * 180.02562 * 13 3 2 15 15 C 1.48002 * 120.00198 * 0.02562 * 13 3 2 16 16 C 1.39860 * 120.92724 * 24.05055 * 15 13 3 17 17 C 1.38217 * 119.01269 * 179.77623 * 16 15 13 18 18 Cl 1.73602 * 119.52425 * 180.24861 * 17 16 15 19 19 N 1.31941 * 120.94878 * 0.50853 * 17 16 15 20 20 C 1.31750 * 122.07341 * 359.74005 * 19 17 16 21 21 C 1.38482 * 120.87137 * 0.02562 * 20 19 17 22 22 F 1.35099 * 120.52608 * 179.97438 * 21 20 19 23 23 H 1.09002 * 109.47337 * 180.02562 * 1 2 3 24 24 H 1.09003 * 109.47364 * 300.00502 * 1 2 3 25 25 H 1.09001 * 109.47246 * 60.00536 * 1 2 3 26 26 H 1.09003 * 109.47364 * 239.99498 * 2 1 3 27 27 H 1.09006 * 109.46827 * 119.99633 * 2 1 3 28 28 H 1.09003 * 109.47262 * 210.00059 * 4 3 2 29 29 H 1.08999 * 109.47203 * 330.00284 * 4 3 2 30 30 H 0.96998 * 120.00618 * 180.02562 * 8 7 5 31 31 H 1.07996 * 120.49352 * 359.97438 * 16 15 13 32 32 H 1.08001 * 119.56139 * 179.97438 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 6 2.0463 2.1482 1.2477 5 6 3.3735 1.9454 1.9323 6 1 4.1214 1.3092 1.4828 7 6 3.6329 2.5723 3.1328 8 7 2.7224 3.3475 3.6800 9 14 5.2782 2.3215 3.9810 10 1 6.2369 3.3565 3.5175 11 1 5.0997 2.4347 5.4508 12 1 5.8060 0.9737 3.6488 13 6 2.4418 1.9462 -1.1481 14 8 2.8473 3.0918 -1.1480 15 6 2.4129 1.1714 -2.4088 16 6 1.5357 0.0942 -2.5706 17 6 1.5387 -0.5990 -3.7664 18 17 0.4507 -1.9342 -3.9839 19 7 2.3600 -0.2637 -4.7430 20 6 3.2060 0.7403 -4.6320 21 6 3.2676 1.4925 -3.4710 22 9 4.1381 2.5202 -3.3645 23 1 -0.3634 -1.0277 0.0005 24 1 -0.3634 0.5139 0.8899 25 1 -0.3634 0.5137 -0.8900 26 1 1.8933 -0.5139 -0.8899 27 1 1.8932 -0.5138 0.8901 28 1 1.9096 3.2068 1.0267 29 1 1.2441 1.8071 1.9021 30 1 2.9049 3.7887 4.5243 31 1 0.8637 -0.1897 -1.7742 32 1 3.8605 0.9792 -5.4572 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000930466528.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:12:55 Heat of formation + Delta-G solvation = -16.763211 kcal Electronic energy + Delta-G solvation = -20462.421234 eV Core-core repulsion = 16979.153736 eV Total energy + Delta-G solvation = -3483.267498 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 286.063 amu Computer time = 0.38 seconds Orbital eigenvalues (eV) -48.98755 -40.81637 -38.88939 -36.88129 -35.88685 -33.50055 -32.36049 -31.07003 -30.26625 -27.56506 -25.03873 -24.01415 -23.14509 -22.50657 -19.61370 -17.94944 -17.72456 -17.28239 -16.54082 -16.14628 -15.86952 -15.38060 -15.03330 -14.44313 -14.26913 -14.19465 -14.11971 -13.26729 -12.97197 -12.53267 -12.25858 -12.18176 -11.84916 -11.80514 -11.55645 -11.31889 -11.08948 -10.96389 -10.67976 -10.24089 -10.20477 -9.98309 -9.73284 -9.22413 -9.01646 -8.51092 -7.90741 -6.12732 -4.18018 0.38616 0.47884 1.48237 2.89330 3.27301 3.31371 3.33792 3.40318 3.61593 3.77540 4.06851 4.35981 4.40729 4.46490 4.80318 5.00956 5.08984 5.21863 5.29033 5.34694 5.44272 5.57078 5.80195 6.06780 6.10486 6.33292 6.86094 7.21826 7.25926 7.33794 7.82228 8.09536 8.12040 8.64927 8.87158 9.47334 10.95495 Molecular weight = 286.06amu Principal moments of inertia in cm(-1) A = 0.021115 B = 0.005120 C = 0.004490 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1325.721906 B = 5467.915107 C = 6234.402233 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.183 4.183 2 C 0.072 3.928 3 N -0.578 5.578 4 C 0.246 3.754 5 C -0.531 4.531 6 H 0.058 0.942 7 C 0.064 3.936 8 N -0.893 5.893 9 Si 0.899 3.101 10 H -0.279 1.279 11 H -0.285 1.285 12 H -0.274 1.274 13 C 0.544 3.456 14 O -0.512 6.512 15 C -0.100 4.100 16 C -0.131 4.131 17 C 0.150 3.850 18 Cl -0.021 7.021 19 N -0.442 5.442 20 C 0.086 3.914 21 C 0.106 3.894 22 F -0.100 7.100 23 H 0.070 0.930 24 H 0.075 0.925 25 H 0.058 0.942 26 H 0.086 0.914 27 H 0.088 0.912 28 H 0.047 0.953 29 H 0.039 0.961 30 H 0.265 0.735 31 H 0.193 0.807 32 H 0.183 0.817 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.658 -10.158 -13.558 17.570 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.240 4.240 2 C -0.051 4.051 3 N -0.309 5.309 4 C 0.127 3.873 5 C -0.570 4.570 6 H 0.076 0.924 7 C -0.139 4.139 8 N -0.531 5.531 9 Si 0.727 3.273 10 H -0.204 1.204 11 H -0.211 1.211 12 H -0.199 1.199 13 C 0.328 3.672 14 O -0.388 6.388 15 C -0.113 4.113 16 C -0.151 4.151 17 C -0.014 4.014 18 Cl 0.008 6.992 19 N -0.153 5.153 20 C -0.073 4.073 21 C 0.083 3.917 22 F -0.078 7.078 23 H 0.089 0.911 24 H 0.094 0.906 25 H 0.077 0.923 26 H 0.104 0.896 27 H 0.107 0.893 28 H 0.065 0.935 29 H 0.057 0.943 30 H 0.074 0.926 31 H 0.210 0.790 32 H 0.200 0.800 Dipole moment (debyes) X Y Z Total from point charges -4.580 -9.973 -14.105 17.872 hybrid contribution 1.003 0.342 1.258 1.645 sum -3.577 -9.631 -12.847 16.450 Atomic orbital electron populations 1.22336 0.96033 1.02461 1.03208 1.22283 0.94148 0.84598 1.04086 1.48194 1.60220 1.13245 1.09268 1.19408 0.97584 0.92299 0.77961 1.21385 1.00465 1.29605 1.05525 0.92370 1.24917 0.97200 0.94758 0.97018 1.69918 1.33959 1.30370 1.18895 0.86479 0.83758 0.78660 0.78435 1.20448 1.21056 1.19892 1.17709 0.80315 0.86599 0.82553 1.90836 1.45677 1.17012 1.85298 1.20984 0.96749 0.96979 0.96544 1.23369 1.00219 0.93441 0.98094 1.21561 0.95195 0.93642 0.90972 1.98412 1.59929 1.43457 1.97443 1.66872 1.03612 1.14404 1.30428 1.22770 0.97421 0.90844 0.96305 1.18891 0.90229 0.87745 0.94848 1.91642 1.65388 1.54726 1.96077 0.91137 0.90611 0.92287 0.89595 0.89342 0.93464 0.94292 0.92575 0.79020 0.80042 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -2.20 9.05 37.15 0.34 -1.86 16 2 C 0.07 1.08 5.57 -4.05 -0.02 1.06 16 3 N -0.58 -11.75 2.47 -176.12 -0.44 -12.18 16 4 C 0.25 6.15 5.15 -5.19 -0.03 6.13 16 5 C -0.53 -14.65 9.39 -34.44 -0.32 -14.97 16 6 H 0.06 1.61 7.81 -52.49 -0.41 1.20 16 7 C 0.06 1.78 5.46 -17.82 -0.10 1.68 16 8 N -0.89 -25.85 13.29 55.43 0.74 -25.12 16 9 Si 0.90 21.49 29.54 -169.99 -5.02 16.47 16 10 H -0.28 -6.72 7.11 56.52 0.40 -6.32 16 11 H -0.28 -6.66 7.11 56.52 0.40 -6.25 16 12 H -0.27 -6.40 7.11 56.52 0.40 -6.00 16 13 C 0.54 11.32 7.51 -12.26 -0.09 11.23 16 14 O -0.51 -12.86 15.42 5.34 0.08 -12.78 16 15 C -0.10 -1.63 5.64 -104.60 -0.59 -2.22 16 16 C -0.13 -1.71 7.31 -38.98 -0.28 -1.99 16 17 C 0.15 1.84 7.27 -17.51 -0.13 1.71 16 18 Cl -0.02 -0.22 29.10 -51.86 -1.51 -1.72 16 19 N -0.44 -5.56 10.31 -10.35 -0.11 -5.67 16 20 C 0.09 1.02 11.17 -17.50 -0.20 0.82 16 21 C 0.11 1.59 7.30 -38.81 -0.28 1.30 16 22 F -0.10 -1.71 16.00 2.25 0.04 -1.67 16 23 H 0.07 0.64 8.14 -51.93 -0.42 0.21 16 24 H 0.07 1.02 7.76 -51.93 -0.40 0.62 16 25 H 0.06 0.68 6.96 -51.93 -0.36 0.32 16 26 H 0.09 1.12 4.14 -51.93 -0.21 0.91 16 27 H 0.09 1.36 8.14 -51.93 -0.42 0.94 16 28 H 0.05 1.34 7.42 -51.93 -0.39 0.95 16 29 H 0.04 0.97 7.69 -51.93 -0.40 0.57 16 30 H 0.26 7.24 8.31 -40.82 -0.34 6.90 16 31 H 0.19 2.25 2.36 -52.49 -0.12 2.12 16 32 H 0.18 1.50 8.06 -52.49 -0.42 1.07 16 LS Contribution 295.04 15.07 4.45 4.45 Total: -1.00 -31.93 295.04 -6.18 -38.10 By element: Atomic # 1 Polarization: -0.06 SS G_CDS: -2.70 Total: -2.76 kcal Atomic # 6 Polarization: 4.59 SS G_CDS: -1.71 Total: 2.89 kcal Atomic # 7 Polarization: -43.16 SS G_CDS: 0.19 Total: -42.97 kcal Atomic # 8 Polarization: -12.86 SS G_CDS: 0.08 Total: -12.78 kcal Atomic # 9 Polarization: -1.71 SS G_CDS: 0.04 Total: -1.67 kcal Atomic # 14 Polarization: 21.49 SS G_CDS: -5.02 Total: 16.47 kcal Atomic # 17 Polarization: -0.22 SS G_CDS: -1.51 Total: -1.72 kcal Total LS contribution 4.45 Total: 4.45 kcal Total: -31.93 -6.18 -38.10 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000930466528.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.339 kcal (2) G-P(sol) polarization free energy of solvation -31.925 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.586 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.177 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.102 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.763 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds