Wall clock time and date at job start Tue Mar 31 2020 05:36:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13593 * 1 3 3 C 1.43203 * 179.97438 * 2 1 4 4 N 1.32932 * 119.63354 * 40.57650 * 3 2 1 5 5 C 1.31326 * 121.77446 * 180.02562 * 4 3 2 6 6 C 1.39727 * 120.80555 * 359.97438 * 5 4 3 7 7 C 1.48265 * 120.40889 * 179.97438 * 6 5 4 8 8 C 1.39655 * 120.02295 * 130.04481 * 7 6 5 9 9 C 1.38434 * 120.41495 * 180.02562 * 8 7 6 10 10 C 1.37689 * 120.46184 * 359.95444 * 9 8 7 11 11 C 1.40733 * 120.03595 * 0.04739 * 10 9 8 12 12 C 1.41320 * 120.20520 * 179.97438 * 11 10 9 13 13 H 1.08002 * 120.00040 * 204.64065 * 12 11 10 14 14 C 1.39928 * 120.00148 * 24.65034 * 12 11 10 15 15 N 1.30850 * 120.00129 * 17.80368 * 14 12 11 16 16 Si 1.86801 * 120.00272 * 197.80914 * 14 12 11 17 17 H 1.48502 * 109.46825 * 94.68374 * 16 14 12 18 18 H 1.48497 * 109.47241 * 214.68268 * 16 14 12 19 19 H 1.48495 * 109.46936 * 334.68656 * 16 14 12 20 20 C 1.39149 * 120.02247 * 309.77406 * 7 6 5 21 21 F 1.35102 * 120.22806 * 0.02562 * 20 7 6 22 22 C 1.39702 * 119.18371 * 0.02830 * 6 5 4 23 23 C 1.38531 * 118.38158 * 359.97438 * 22 6 5 24 24 F 1.35094 * 120.43848 * 180.02562 * 23 22 6 25 25 H 1.07992 * 119.59713 * 179.97438 * 5 4 3 26 26 H 1.07997 * 119.79884 * 359.97438 * 8 7 6 27 27 H 1.08003 * 119.77203 * 179.97438 * 9 8 7 28 28 H 1.08007 * 119.97941 * 180.02562 * 10 9 8 29 29 H 0.96996 * 120.00535 * 180.02562 * 15 14 12 30 30 H 1.08000 * 120.80901 * 179.97438 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 7 3.2256 -0.8767 -0.7516 5 6 4.5380 -0.9137 -0.7831 6 6 5.2975 -0.0227 -0.0204 7 6 6.7787 -0.0727 -0.0622 8 6 7.5114 1.0961 -0.2800 9 6 8.8947 1.0587 -0.3212 10 6 9.5663 -0.1305 -0.1470 11 6 8.8471 -1.3199 0.0736 12 6 9.5328 -2.5427 0.2523 13 1 9.0390 -3.4765 0.0277 14 6 10.8515 -2.5434 0.7203 15 7 11.3349 -1.4835 1.3161 16 14 11.9219 -4.0576 0.4943 17 1 12.7291 -3.9128 -0.7437 18 1 12.8281 -4.2019 1.6619 19 1 11.0596 -5.2615 0.3851 20 6 7.4400 -1.2832 0.1211 21 9 6.7369 -2.4164 0.3371 22 6 4.6440 0.9149 0.7830 23 6 3.2588 0.9240 0.7907 24 9 2.5844 1.8133 1.5519 25 1 5.0362 -1.6416 -1.4061 26 1 6.9958 2.0349 -0.4181 27 1 9.4509 1.9689 -0.4907 28 1 10.6457 -0.1507 -0.1802 29 1 12.2491 -1.4839 1.6402 30 1 5.2051 1.6157 1.3834 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001238993307.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:36:38 Heat of formation + Delta-G solvation = -10.306139 kcal Electronic energy + Delta-G solvation = -20597.097318 eV Core-core repulsion = 16993.082364 eV Total energy + Delta-G solvation = -3604.014954 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 286.061 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -49.21779 -47.56895 -40.24766 -37.62498 -36.58720 -34.36541 -32.85426 -31.56499 -29.95408 -28.86923 -25.64583 -24.85564 -23.66722 -21.22302 -20.87747 -19.66111 -18.03645 -17.46794 -16.84184 -16.28257 -16.13874 -15.48065 -15.32676 -14.79937 -14.40829 -14.25455 -14.16890 -13.68888 -13.44946 -13.23338 -13.05461 -12.85922 -12.80511 -12.48066 -12.14237 -11.84798 -11.50543 -11.29469 -11.09767 -10.68332 -10.29431 -10.03030 -9.82491 -9.76761 -9.46471 -9.07088 -7.79399 -7.58575 -7.06209 -4.67160 0.28185 0.93981 2.24424 2.39691 2.42022 2.80723 2.94282 2.98850 2.99139 3.28775 3.69415 3.73830 3.87157 4.27388 4.45468 4.57195 4.81154 5.09780 5.20252 5.39466 5.52631 5.66553 5.95222 6.03016 6.25599 6.35966 6.59303 6.76018 6.90212 7.12634 7.21587 7.24454 7.54290 7.60110 7.67894 7.78363 8.24615 8.47078 8.52734 9.87238 Molecular weight = 286.06amu Principal moments of inertia in cm(-1) A = 0.031141 B = 0.003988 C = 0.003699 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 898.918014 B = 7019.520818 C = 7567.360014 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.393 5.393 2 C 0.274 3.726 3 C 0.134 3.866 4 N -0.421 5.421 5 C 0.113 3.887 6 C 0.003 3.997 7 C -0.082 4.082 8 C -0.194 4.194 9 C -0.110 4.110 10 C -0.132 4.132 11 C 0.084 3.916 12 C -0.449 4.449 13 H 0.087 0.913 14 C 0.076 3.924 15 N -0.784 5.784 16 Si 0.914 3.086 17 H -0.265 1.265 18 H -0.275 1.275 19 H -0.259 1.259 20 C -0.002 4.002 21 F -0.154 7.154 22 C -0.107 4.107 23 C 0.104 3.896 24 F -0.122 7.122 25 H 0.178 0.822 26 H 0.102 0.898 27 H 0.101 0.899 28 H 0.129 0.871 29 H 0.286 0.714 30 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.349 3.760 -1.482 5.249 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.070 5.070 2 C -0.043 4.043 3 C -0.004 4.004 4 N -0.130 5.130 5 C -0.049 4.049 6 C 0.000 4.000 7 C -0.083 4.083 8 C -0.213 4.213 9 C -0.129 4.129 10 C -0.151 4.151 11 C 0.081 3.919 12 C -0.478 4.478 13 H 0.105 0.895 14 C -0.143 4.143 15 N -0.409 5.409 16 Si 0.738 3.262 17 H -0.190 1.190 18 H -0.200 1.200 19 H -0.182 1.182 20 C -0.022 4.022 21 F -0.133 7.133 22 C -0.132 4.132 23 C 0.080 3.920 24 F -0.100 7.100 25 H 0.195 0.805 26 H 0.121 0.879 27 H 0.119 0.881 28 H 0.146 0.854 29 H 0.097 0.903 30 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -5.450 3.241 -1.807 6.593 hybrid contribution 1.313 -0.039 0.732 1.504 sum -4.137 3.202 -1.075 5.341 Atomic orbital electron populations 1.81193 1.11342 1.07136 1.07339 1.24758 0.91463 0.94006 0.94036 1.16322 0.86594 0.97195 1.00246 1.67564 1.10764 1.18295 1.16333 1.23124 0.87112 0.97521 0.97127 1.20134 0.95312 0.92328 0.92188 1.18031 0.88093 0.93946 1.08261 1.20232 0.93718 0.94877 1.12498 1.20677 0.93480 0.97485 1.01235 1.21352 1.00351 0.91174 1.02257 1.17548 0.88523 0.94788 0.91039 1.19584 0.96815 0.93917 1.37441 0.89523 1.25942 0.98269 0.98067 0.92054 1.69783 1.16630 1.29677 1.24764 0.86171 0.79581 0.81473 0.78953 1.19020 1.20023 1.18238 1.17761 0.89904 0.80345 1.14239 1.91309 1.78702 1.50011 1.93292 1.21759 0.91000 1.00539 0.99943 1.18400 0.90563 0.89945 0.93119 1.91553 1.80001 1.65467 1.72981 0.80463 0.87944 0.88090 0.85351 0.90288 0.82106 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.39 -6.22 18.54 41.83 0.78 -5.44 16 2 C 0.27 4.06 15.17 -22.47 -0.34 3.72 16 3 C 0.13 1.93 6.60 -84.87 -0.56 1.37 16 4 N -0.42 -6.34 10.26 -10.78 -0.11 -6.45 16 5 C 0.11 1.69 10.04 -17.21 -0.17 1.52 16 6 C 0.00 0.05 5.32 -104.67 -0.56 -0.50 16 7 C -0.08 -1.51 5.49 -104.91 -0.58 -2.09 16 8 C -0.19 -3.44 9.53 -38.98 -0.37 -3.81 16 9 C -0.11 -2.10 10.01 -39.71 -0.40 -2.50 16 10 C -0.13 -2.90 8.69 -38.84 -0.34 -3.24 16 11 C 0.08 1.97 5.57 -106.80 -0.60 1.38 16 12 C -0.45 -10.75 8.78 -37.78 -0.33 -11.09 16 13 H 0.09 2.06 7.74 -52.49 -0.41 1.65 16 14 C 0.08 1.71 5.14 -17.34 -0.09 1.63 16 15 N -0.78 -17.97 10.96 55.55 0.61 -17.36 16 16 Si 0.91 16.93 29.60 -169.99 -5.03 11.90 16 17 H -0.27 -4.83 7.11 56.52 0.40 -4.43 16 18 H -0.28 -5.01 7.11 56.52 0.40 -4.61 16 19 H -0.26 -4.82 7.11 56.52 0.40 -4.42 16 20 C 0.00 -0.05 7.17 -38.26 -0.27 -0.32 16 21 F -0.15 -3.32 15.37 2.25 0.03 -3.29 16 22 C -0.11 -1.45 9.63 -38.93 -0.38 -1.82 16 23 C 0.10 1.40 7.30 -38.88 -0.28 1.11 16 24 F -0.12 -1.59 16.81 2.25 0.04 -1.55 16 25 H 0.18 2.53 7.80 -52.49 -0.41 2.12 16 26 H 0.10 1.54 8.04 -52.49 -0.42 1.12 16 27 H 0.10 1.67 8.06 -52.48 -0.42 1.24 16 28 H 0.13 2.92 6.16 -52.48 -0.32 2.59 16 29 H 0.29 5.92 8.30 -40.82 -0.34 5.59 16 30 H 0.16 1.91 8.06 -52.49 -0.42 1.49 16 LS Contribution 291.42 15.07 4.39 4.39 Total: -1.00 -24.01 291.42 -6.09 -30.10 By element: Atomic # 1 Polarization: 3.88 SS G_CDS: -1.54 Total: 2.34 kcal Atomic # 6 Polarization: -9.37 SS G_CDS: -5.26 Total: -14.64 kcal Atomic # 7 Polarization: -30.53 SS G_CDS: 1.27 Total: -29.26 kcal Atomic # 9 Polarization: -4.91 SS G_CDS: 0.07 Total: -4.83 kcal Atomic # 14 Polarization: 16.93 SS G_CDS: -5.03 Total: 11.90 kcal Total LS contribution 4.39 Total: 4.39 kcal Total: -24.01 -6.09 -30.10 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001238993307.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.795 kcal (2) G-P(sol) polarization free energy of solvation -24.006 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.211 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.095 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.101 kcal (6) G-S(sol) free energy of system = (1) + (5) -10.306 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds