Wall clock time and date at job start Tue Mar 31 2020 05:39:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13601 * 1 3 3 C 1.43202 * 179.97438 * 2 1 4 4 N 1.32992 * 119.60297 * 63.16619 * 3 2 1 5 5 C 1.31257 * 121.79537 * 180.02562 * 4 3 2 6 6 C 1.40018 * 120.77614 * 359.97438 * 5 4 3 7 7 C 1.47727 * 120.43867 * 180.02562 * 6 5 4 8 8 C 1.39143 * 120.26980 * 130.00437 * 7 6 5 9 9 C 1.38104 * 120.17526 * 180.02562 * 8 7 6 10 10 C 1.38828 * 120.73083 * 359.97180 * 9 8 7 11 11 C 1.37735 * 120.53564 * 0.02845 * 10 9 8 12 12 F 1.35102 * 120.09637 * 179.97438 * 11 10 9 13 13 C 1.41052 * 119.80105 * 359.69805 * 11 10 9 14 14 C 1.40718 * 120.35595 * 180.28023 * 13 11 10 15 15 H 1.08001 * 120.00559 * 143.47391 * 14 13 11 16 16 C 1.40145 * 119.99599 * 323.47501 * 14 13 11 17 17 N 1.30750 * 120.00071 * 339.92965 * 16 14 13 18 18 Si 1.86803 * 120.00341 * 159.93526 * 16 14 13 19 19 H 1.48497 * 109.47378 * 89.99311 * 18 16 14 20 20 H 1.48495 * 109.47194 * 210.00030 * 18 16 14 21 21 H 1.48504 * 109.46531 * 329.99778 * 18 16 14 22 22 C 1.40018 * 119.12460 * 0.02562 * 6 5 4 23 23 C 1.38415 * 118.35990 * 0.02562 * 22 6 5 24 24 F 1.35105 * 120.42850 * 180.02562 * 23 22 6 25 25 H 1.08002 * 119.61081 * 179.97438 * 5 4 3 26 26 H 1.08005 * 119.91250 * 359.97438 * 8 7 6 27 27 H 1.08005 * 119.63911 * 179.97438 * 9 8 7 28 28 H 1.07996 * 119.73542 * 179.97438 * 10 9 8 29 29 H 0.96997 * 120.00316 * 180.02562 * 17 16 14 30 30 H 1.07996 * 120.82391 * 179.97438 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 7 3.2252 -0.5210 -1.0318 5 6 4.5368 -0.5436 -1.0764 6 6 5.2986 -0.0130 -0.0282 7 6 6.7744 -0.0417 -0.0864 8 6 7.5087 1.1144 0.1592 9 6 8.8883 1.0854 0.1037 10 6 9.5617 -0.0911 -0.1956 11 6 8.8645 -1.2528 -0.4437 12 9 9.5288 -2.3926 -0.7347 13 6 7.4551 -1.2501 -0.3874 14 6 6.7313 -2.4316 -0.6331 15 1 5.8311 -2.6396 -0.0739 16 6 7.1788 -3.3384 -1.6034 17 7 8.0050 -2.9428 -2.5364 18 14 6.5947 -5.1123 -1.5641 19 1 5.3548 -5.2433 -2.3708 20 1 7.6483 -5.9930 -2.1292 21 1 6.3165 -5.5108 -0.1609 22 6 4.6430 0.5453 1.0760 23 6 3.2589 0.5491 1.0860 24 9 2.5836 1.0775 2.1301 25 1 5.0344 -0.9765 -1.9317 26 1 6.9983 2.0371 0.3929 27 1 9.4496 1.9880 0.2954 28 1 10.6409 -0.0955 -0.2351 29 1 8.3144 -3.5703 -3.2082 30 1 5.2034 0.9618 1.8998 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001238996617.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:39:24 Heat of formation + Delta-G solvation = -5.512267 kcal Electronic energy + Delta-G solvation = -21104.571239 eV Core-core repulsion = 17500.764163 eV Total energy + Delta-G solvation = -3603.807076 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 286.061 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -48.96723 -47.25546 -39.94562 -37.60292 -36.30445 -34.02908 -32.88249 -31.34671 -29.94189 -28.83310 -25.79880 -24.52447 -23.28015 -21.23780 -20.77437 -19.32781 -17.79551 -17.31629 -17.03368 -15.89496 -15.75199 -15.54949 -14.83264 -14.71866 -14.51109 -13.99367 -13.91017 -13.58939 -13.28294 -13.10081 -12.94575 -12.64171 -12.58186 -12.13029 -12.01649 -11.70827 -11.54332 -11.43967 -10.94248 -10.85914 -10.50470 -9.97386 -9.63549 -9.48108 -9.31749 -8.74391 -7.75586 -7.47958 -7.15013 -4.77183 0.60369 1.29047 2.26276 2.48675 2.64331 2.96256 2.96914 3.02239 3.06030 3.60853 3.74088 4.01490 4.15095 4.29594 4.80571 4.93808 5.02067 5.19634 5.53317 5.66479 5.76327 5.80292 5.98593 6.17235 6.27086 6.43257 6.66144 6.81166 6.82165 7.12182 7.24340 7.42719 7.46664 7.48332 7.75409 7.96839 8.04475 8.37061 8.46344 9.81634 Molecular weight = 286.06amu Principal moments of inertia in cm(-1) A = 0.015781 B = 0.006405 C = 0.004846 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1773.815317 B = 4370.629758 C = 5776.412764 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.408 5.408 2 C 0.280 3.720 3 C 0.112 3.888 4 N -0.426 5.426 5 C 0.121 3.879 6 C 0.040 3.960 7 C -0.180 4.180 8 C -0.069 4.069 9 C -0.213 4.213 10 C -0.125 4.125 11 C 0.047 3.953 12 F -0.140 7.140 13 C 0.112 3.888 14 C -0.454 4.454 15 H 0.090 0.910 16 C 0.081 3.919 17 N -0.758 5.758 18 Si 0.906 3.094 19 H -0.264 1.264 20 H -0.273 1.273 21 H -0.258 1.258 22 C -0.134 4.134 23 C 0.104 3.896 24 F -0.128 7.128 25 H 0.184 0.816 26 H 0.101 0.899 27 H 0.103 0.897 28 H 0.105 0.895 29 H 0.291 0.709 30 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.131 3.616 3.145 4.795 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.085 5.085 2 C -0.037 4.037 3 C -0.024 4.024 4 N -0.135 5.135 5 C -0.042 4.042 6 C 0.037 3.963 7 C -0.183 4.183 8 C -0.087 4.087 9 C -0.233 4.233 10 C -0.144 4.144 11 C 0.027 3.973 12 F -0.119 7.119 13 C 0.109 3.891 14 C -0.481 4.481 15 H 0.108 0.892 16 C -0.143 4.143 17 N -0.379 5.379 18 Si 0.729 3.271 19 H -0.189 1.189 20 H -0.197 1.197 21 H -0.181 1.181 22 C -0.159 4.159 23 C 0.079 3.921 24 F -0.107 7.107 25 H 0.201 0.799 26 H 0.119 0.881 27 H 0.121 0.879 28 H 0.123 0.877 29 H 0.102 0.898 30 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges -2.016 3.167 2.260 4.382 hybrid contribution 0.907 -0.585 0.699 1.286 sum -1.109 2.581 2.959 4.080 Atomic orbital electron populations 1.81163 1.11515 1.08439 1.07397 1.24879 0.91609 0.93618 0.93553 1.16293 0.86366 1.06176 0.93604 1.67582 1.11192 1.12529 1.22224 1.23354 0.86505 0.95337 0.98974 1.19886 0.94973 0.90352 0.91132 1.18081 0.88444 0.93617 1.18110 1.20633 0.93703 0.95972 0.98413 1.20099 0.93631 0.96777 1.12747 1.20738 0.98685 0.92551 1.02448 1.17761 0.90115 0.82162 1.07272 1.91357 1.80270 1.49148 1.91126 1.17393 0.89880 0.92125 0.89749 1.19438 1.09691 1.01836 1.17109 0.89189 1.25876 0.93496 1.01017 0.93908 1.69682 1.22166 1.37626 1.08426 0.86298 0.79423 0.81076 0.80297 1.18926 1.19740 1.18137 1.21746 0.90891 1.02970 1.00318 1.18394 0.90603 0.98010 0.85073 1.91522 1.80152 1.83731 1.55282 0.79867 0.88076 0.87861 0.87735 0.89819 0.82935 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -7.15 18.54 41.84 0.78 -6.37 16 2 C 0.28 4.67 15.16 -22.47 -0.34 4.33 16 3 C 0.11 1.82 6.60 -84.81 -0.56 1.26 16 4 N -0.43 -7.39 10.26 -10.68 -0.11 -7.50 16 5 C 0.12 2.11 9.41 -17.13 -0.16 1.95 16 6 C 0.04 0.68 4.97 -104.69 -0.52 0.16 16 7 C -0.18 -3.45 5.54 -104.28 -0.58 -4.02 16 8 C -0.07 -1.20 9.51 -39.29 -0.37 -1.58 16 9 C -0.21 -3.80 10.02 -39.41 -0.40 -4.19 16 10 C -0.12 -2.46 9.99 -39.55 -0.40 -2.85 16 11 C 0.05 1.06 6.68 -38.70 -0.26 0.80 16 12 F -0.14 -3.34 14.26 2.25 0.03 -3.31 16 13 C 0.11 2.47 5.40 -106.49 -0.58 1.89 16 14 C -0.45 -10.06 6.68 -37.93 -0.25 -10.31 16 15 H 0.09 1.95 7.26 -52.49 -0.38 1.57 16 16 C 0.08 1.78 4.50 -17.30 -0.08 1.70 16 17 N -0.76 -17.41 11.12 55.56 0.62 -16.79 16 18 Si 0.91 17.17 29.61 -169.99 -5.03 12.14 16 19 H -0.26 -4.96 7.11 56.52 0.40 -4.56 16 20 H -0.27 -5.14 7.11 56.52 0.40 -4.74 16 21 H -0.26 -4.93 7.11 56.52 0.40 -4.53 16 22 C -0.13 -1.99 9.65 -38.85 -0.37 -2.36 16 23 C 0.10 1.56 7.29 -38.89 -0.28 1.28 16 24 F -0.13 -1.87 16.81 2.25 0.04 -1.83 16 25 H 0.18 3.33 7.33 -52.49 -0.38 2.95 16 26 H 0.10 1.49 8.04 -52.48 -0.42 1.07 16 27 H 0.10 1.56 8.06 -52.48 -0.42 1.14 16 28 H 0.10 1.85 8.06 -52.49 -0.42 1.43 16 29 H 0.29 6.17 8.29 -40.82 -0.34 5.83 16 30 H 0.15 1.95 8.06 -52.49 -0.42 1.53 16 LS Contribution 288.43 15.07 4.35 4.35 Total: -1.00 -23.51 288.43 -6.07 -29.58 By element: Atomic # 1 Polarization: 3.28 SS G_CDS: -1.59 Total: 1.69 kcal Atomic # 6 Polarization: -6.80 SS G_CDS: -5.15 Total: -11.95 kcal Atomic # 7 Polarization: -31.95 SS G_CDS: 1.28 Total: -30.66 kcal Atomic # 9 Polarization: -5.21 SS G_CDS: 0.07 Total: -5.14 kcal Atomic # 14 Polarization: 17.17 SS G_CDS: -5.03 Total: 12.14 kcal Total LS contribution 4.35 Total: 4.35 kcal Total: -23.51 -6.07 -29.58 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001238996617.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 24.063 kcal (2) G-P(sol) polarization free energy of solvation -23.506 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 0.557 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.069 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.575 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.512 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds