Wall clock time and date at job start Tue Mar 31 2020 06:09:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50707 * 1 3 3 N 1.30209 * 126.79269 * 2 1 4 4 O 1.20915 * 111.64885 * 180.28904 * 3 2 1 5 5 C 1.34069 * 111.55038 * 359.70593 * 4 3 2 6 6 Cl 1.73604 * 126.79768 * 180.02562 * 5 4 3 7 7 C 1.35674 * 106.40802 * 359.97438 * 5 4 3 8 8 C 1.50695 * 128.01698 * 180.02562 * 7 5 4 9 9 C 1.50702 * 109.47377 * 90.02270 * 8 7 5 10 10 O 1.21282 * 119.99614 * 0.02562 * 9 8 7 11 11 N 1.34773 * 120.00126 * 179.97438 * 9 8 7 12 12 C 1.46505 * 119.99838 * 0.02562 * 11 9 8 13 13 C 1.46500 * 120.00007 * 180.02562 * 11 9 8 14 14 H 1.09001 * 109.47297 * 0.02562 * 13 11 9 15 15 C 1.53006 * 109.46998 * 240.00425 * 13 11 9 16 16 C 1.50698 * 109.46840 * 120.00599 * 13 11 9 17 17 H 1.07993 * 120.00472 * 0.02562 * 16 13 11 18 18 C 1.37882 * 119.99554 * 180.02562 * 16 13 11 19 19 N 1.31515 * 120.00420 * 359.97438 * 18 16 13 20 20 Si 1.86798 * 119.99716 * 179.97438 * 18 16 13 21 21 H 1.48500 * 109.47049 * 89.99950 * 20 18 16 22 22 H 1.48499 * 109.47170 * 209.99777 * 20 18 16 23 23 H 1.48502 * 109.47245 * 329.99617 * 20 18 16 24 24 H 1.08997 * 109.46758 * 270.19977 * 1 2 3 25 25 H 1.08997 * 109.46953 * 30.19632 * 1 2 3 26 26 H 1.08995 * 109.46748 * 150.19709 * 1 2 3 27 27 H 1.09002 * 109.47241 * 330.02611 * 8 7 5 28 28 H 1.08996 * 109.47235 * 210.03054 * 8 7 5 29 29 H 1.08999 * 109.46748 * 269.99069 * 12 11 9 30 30 H 1.08997 * 109.47257 * 29.99586 * 12 11 9 31 31 H 1.09002 * 109.46769 * 149.99443 * 12 11 9 32 32 H 1.09001 * 109.47002 * 179.97438 * 15 13 11 33 33 H 1.08993 * 109.46955 * 300.00226 * 15 13 11 34 34 H 1.09000 * 109.47050 * 60.00054 * 15 13 11 35 35 H 0.97001 * 120.00306 * 180.02562 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 7 2.2869 1.0427 0.0000 4 8 3.4541 0.7269 -0.0057 5 6 3.6037 -0.6055 -0.0039 6 17 5.1012 -1.4837 -0.0096 7 6 2.3531 -1.1315 0.0044 8 6 1.9580 -2.5858 0.0101 9 6 1.8337 -3.0670 1.4328 10 8 2.0448 -2.3040 2.3517 11 7 1.4871 -4.3449 1.6841 12 6 1.2316 -5.2664 0.5741 13 6 1.3658 -4.8126 3.0671 14 1 1.5913 -3.9927 3.7491 15 6 2.3494 -5.9602 3.3056 16 6 -0.0401 -5.2969 3.3121 17 1 -0.7700 -5.2605 2.5170 18 6 -0.3944 -5.7866 4.5514 19 7 0.4946 -5.8315 5.5195 20 14 -2.1372 -6.3863 4.8552 21 1 -2.2260 -7.8333 4.5334 22 1 -2.4922 -6.1737 6.2814 23 1 -3.0789 -5.6286 3.9925 24 1 -0.3633 0.0036 1.0276 25 1 -0.3633 0.8882 -0.5169 26 1 -0.3633 -0.8917 -0.5108 27 1 2.7189 -3.1711 -0.5062 28 1 1.0013 -2.7043 -0.4985 29 1 0.1766 -5.2252 0.3033 30 1 1.8387 -4.9785 -0.2841 31 1 1.4895 -6.2811 0.8776 32 1 2.2594 -6.3078 4.3348 33 1 2.1235 -6.7799 2.6237 34 1 3.3662 -5.6098 3.1284 35 1 0.2455 -6.1764 6.3912 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000103441489.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:09:02 Heat of formation + Delta-G solvation = 23.410086 kcal Electronic energy + Delta-G solvation = -20787.132805 eV Core-core repulsion = 17429.067657 eV Total energy + Delta-G solvation = -3358.065148 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 286.087 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -45.00989 -39.18014 -37.22067 -35.69063 -34.99537 -32.98237 -32.26692 -29.92800 -28.82636 -27.99493 -26.14399 -25.22980 -22.62429 -21.47229 -20.79416 -18.46005 -17.81589 -17.60571 -16.62606 -16.23971 -15.50105 -15.31170 -14.76536 -14.26859 -13.61610 -13.37740 -13.10948 -12.93643 -12.74350 -12.63779 -12.59436 -12.39706 -12.01146 -11.81203 -11.56192 -11.49604 -11.10043 -10.89616 -10.81682 -10.72682 -10.28860 -10.19413 -9.96719 -9.36429 -9.17770 -8.88413 -8.45333 -7.63610 -6.09535 -4.17796 1.04325 1.26746 2.09537 3.24163 3.28745 3.32319 3.35153 3.58855 3.93719 4.06824 4.37851 4.56376 4.81520 4.95482 5.17575 5.23179 5.39399 5.49742 5.54260 5.61228 5.70455 5.75109 6.01625 6.08161 6.24753 6.73693 6.79221 7.02685 7.38912 7.48924 7.68735 7.98694 8.08010 8.16617 8.47925 8.80221 8.99967 9.48852 10.95744 Molecular weight = 286.09amu Principal moments of inertia in cm(-1) A = 0.022789 B = 0.004703 C = 0.004279 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1228.357678 B = 5951.868517 C = 6541.923521 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 C 0.045 3.955 3 N -0.352 5.352 4 O 0.106 5.894 5 C 0.008 3.992 6 Cl 0.045 6.955 7 C -0.139 4.139 8 C -0.070 4.070 9 C 0.506 3.494 10 O -0.544 6.544 11 N -0.592 5.592 12 C 0.084 3.916 13 C 0.258 3.742 14 H 0.063 0.937 15 C -0.147 4.147 16 C -0.525 4.525 17 H 0.059 0.941 18 C 0.064 3.936 19 N -0.888 5.888 20 Si 0.898 3.102 21 H -0.280 1.280 22 H -0.285 1.285 23 H -0.275 1.275 24 H 0.088 0.912 25 H 0.078 0.922 26 H 0.083 0.917 27 H 0.104 0.896 28 H 0.107 0.893 29 H 0.050 0.950 30 H 0.052 0.948 31 H 0.074 0.926 32 H 0.093 0.907 33 H 0.030 0.970 34 H 0.011 0.989 35 H 0.263 0.737 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.104 5.154 -14.472 15.901 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 C -0.113 4.113 3 N -0.059 5.059 4 O 0.040 5.960 5 C -0.082 4.082 6 Cl 0.073 6.927 7 C -0.144 4.144 8 C -0.110 4.110 9 C 0.292 3.708 10 O -0.422 6.422 11 N -0.323 5.323 12 C -0.060 4.060 13 C 0.158 3.842 14 H 0.081 0.919 15 C -0.206 4.206 16 C -0.564 4.564 17 H 0.077 0.923 18 C -0.138 4.138 19 N -0.526 5.526 20 Si 0.726 3.274 21 H -0.206 1.206 22 H -0.211 1.211 23 H -0.200 1.200 24 H 0.107 0.893 25 H 0.096 0.904 26 H 0.102 0.898 27 H 0.122 0.878 28 H 0.125 0.875 29 H 0.069 0.931 30 H 0.071 0.929 31 H 0.093 0.907 32 H 0.112 0.888 33 H 0.049 0.951 34 H 0.030 0.970 35 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges 4.153 6.710 -13.760 15.862 hybrid contribution -0.753 -1.392 0.216 1.597 sum 3.400 5.318 -13.544 14.943 Atomic orbital electron populations 1.20230 0.85271 1.03651 1.04304 1.23238 0.99081 0.87759 1.01259 1.73873 0.88507 1.22907 1.20610 1.84865 1.22144 1.20593 1.68388 1.24402 0.90742 0.84849 1.08197 1.98442 1.28375 1.69098 1.96737 1.20214 0.89989 0.97154 1.07065 1.20105 1.04172 0.89039 0.97705 1.20056 0.78295 0.82708 0.89733 1.90681 1.50936 1.54357 1.46197 1.48223 1.65789 1.08848 1.09471 1.21602 1.00163 0.95460 0.88787 1.18951 0.94933 0.94120 0.76171 0.91884 1.22097 0.95508 0.98788 1.04167 1.21303 0.95504 1.42289 0.97306 0.92275 1.24899 0.97512 0.95563 0.95834 1.69877 1.33714 1.45957 1.03022 0.86496 0.84406 0.78940 0.77545 1.20611 1.21119 1.19950 0.89312 0.90355 0.89775 0.87818 0.87465 0.93122 0.92932 0.90696 0.88806 0.95076 0.96968 0.92666 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.91 10.39 36.01 0.37 -0.53 16 2 C 0.05 0.67 7.32 -82.12 -0.60 0.07 16 3 N -0.35 -5.55 12.07 33.44 0.40 -5.15 16 4 O 0.11 1.62 11.20 17.10 0.19 1.81 16 5 C 0.01 0.12 8.12 29.82 0.24 0.36 16 6 Cl 0.05 0.57 29.23 -51.86 -1.52 -0.95 16 7 C -0.14 -2.08 4.82 -104.38 -0.50 -2.59 16 8 C -0.07 -0.97 4.65 -29.04 -0.14 -1.11 16 9 C 0.51 9.92 7.67 -10.99 -0.08 9.83 16 10 O -0.54 -13.10 15.36 5.56 0.09 -13.02 16 11 N -0.59 -11.96 2.75 -175.25 -0.48 -12.44 16 12 C 0.08 1.28 9.48 59.85 0.57 1.85 16 13 C 0.26 6.42 2.64 -69.08 -0.18 6.24 16 14 H 0.06 1.84 6.90 -51.93 -0.36 1.49 16 15 C -0.15 -3.44 8.95 37.16 0.33 -3.10 16 16 C -0.53 -13.84 8.37 -34.44 -0.29 -14.12 16 17 H 0.06 1.52 7.64 -52.49 -0.40 1.12 16 18 C 0.06 1.73 5.30 -17.82 -0.09 1.63 16 19 N -0.89 -24.84 11.32 55.43 0.63 -24.21 16 20 Si 0.90 20.68 29.54 -169.99 -5.02 15.65 16 21 H -0.28 -6.31 7.11 56.52 0.40 -5.91 16 22 H -0.29 -6.61 7.11 56.52 0.40 -6.21 16 23 H -0.27 -6.26 7.11 56.52 0.40 -5.86 16 24 H 0.09 1.13 8.14 -51.93 -0.42 0.71 16 25 H 0.08 0.77 8.14 -51.93 -0.42 0.35 16 26 H 0.08 0.82 7.65 -51.93 -0.40 0.43 16 27 H 0.10 1.20 7.40 -51.93 -0.38 0.81 16 28 H 0.11 1.21 7.61 -51.93 -0.40 0.82 16 29 H 0.05 0.74 8.14 -51.93 -0.42 0.31 16 30 H 0.05 0.60 6.44 -51.93 -0.33 0.26 16 31 H 0.07 1.18 6.43 -51.93 -0.33 0.84 16 32 H 0.09 2.43 6.07 -51.93 -0.32 2.11 16 33 H 0.03 0.66 6.66 -51.93 -0.35 0.31 16 34 H 0.01 0.25 8.14 -51.93 -0.42 -0.17 16 35 H 0.26 7.02 8.31 -40.82 -0.34 6.68 16 LS Contribution 314.19 15.07 4.73 4.73 Total: -1.00 -31.49 314.19 -5.44 -36.93 By element: Atomic # 1 Polarization: 2.19 SS G_CDS: -4.09 Total: -1.90 kcal Atomic # 6 Polarization: -1.09 SS G_CDS: -0.37 Total: -1.47 kcal Atomic # 7 Polarization: -42.35 SS G_CDS: 0.55 Total: -41.80 kcal Atomic # 8 Polarization: -11.48 SS G_CDS: 0.28 Total: -11.20 kcal Atomic # 14 Polarization: 20.68 SS G_CDS: -5.02 Total: 15.65 kcal Atomic # 17 Polarization: 0.57 SS G_CDS: -1.52 Total: -0.95 kcal Total LS contribution 4.73 Total: 4.73 kcal Total: -31.49 -5.44 -36.93 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000103441489.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 60.341 kcal (2) G-P(sol) polarization free energy of solvation -31.491 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 28.850 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.440 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.931 kcal (6) G-S(sol) free energy of system = (1) + (5) 23.410 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds