Wall clock time and date at job start Tue Mar 31 2020 06:08:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 N 1.30206 * 126.79261 * 2 1 4 4 O 1.20920 * 111.64610 * 180.29156 * 3 2 1 5 5 C 1.34057 * 111.55483 * 359.69853 * 4 3 2 6 6 Cl 1.73602 * 126.80264 * 180.02562 * 5 4 3 7 7 C 1.35682 * 106.40626 * 0.02562 * 5 4 3 8 8 C 1.50697 * 128.01459 * 180.02562 * 7 5 4 9 9 C 1.52997 * 109.47466 * 90.02294 * 8 7 5 10 10 C 1.50701 * 109.47212 * 179.97438 * 9 8 7 11 11 O 1.21280 * 119.99781 * 0.02562 * 10 9 8 12 12 N 1.34780 * 119.99795 * 179.97438 * 10 9 8 13 13 C 1.46490 * 120.00111 * 0.02562 * 12 10 9 14 14 C 1.46497 * 119.99566 * 180.02562 * 12 10 9 15 15 C 1.50707 * 109.47162 * 90.00410 * 14 12 10 16 16 H 1.07998 * 119.99576 * 359.97438 * 15 14 12 17 17 C 1.37873 * 120.00057 * 179.97438 * 15 14 12 18 18 N 1.31510 * 120.00061 * 180.02562 * 17 15 14 19 19 Si 1.86803 * 120.00225 * 359.97438 * 17 15 14 20 20 H 1.48503 * 109.46861 * 89.99972 * 19 17 15 21 21 H 1.48498 * 109.47453 * 210.00313 * 19 17 15 22 22 H 1.48505 * 109.46941 * 330.00240 * 19 17 15 23 23 H 1.09007 * 109.46930 * 270.20164 * 1 2 3 24 24 H 1.09001 * 109.46764 * 30.19523 * 1 2 3 25 25 H 1.08995 * 109.47444 * 150.20042 * 1 2 3 26 26 H 1.09002 * 109.47120 * 330.02047 * 8 7 5 27 27 H 1.08998 * 109.46862 * 210.02849 * 8 7 5 28 28 H 1.09002 * 109.47153 * 59.99773 * 9 8 7 29 29 H 1.09001 * 109.46832 * 299.99964 * 9 8 7 30 30 H 1.08995 * 109.47620 * 89.99771 * 13 12 10 31 31 H 1.09006 * 109.47028 * 209.99878 * 13 12 10 32 32 H 1.09002 * 109.47109 * 329.99455 * 13 12 10 33 33 H 1.09000 * 109.47018 * 209.99971 * 14 12 10 34 34 H 1.09000 * 109.47828 * 330.00266 * 14 12 10 35 35 H 0.96997 * 120.00410 * 179.97438 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2869 1.0427 0.0000 4 8 3.4540 0.7268 -0.0057 5 6 3.6037 -0.6054 -0.0038 6 17 5.1011 -1.4838 -0.0096 7 6 2.3530 -1.1315 0.0035 8 6 1.9580 -2.5858 0.0089 9 6 1.8306 -3.0744 1.4531 10 6 1.4349 -4.5285 1.4584 11 8 1.2714 -5.1163 0.4102 12 7 1.2639 -5.1761 2.6281 13 6 1.4620 -4.4662 3.8941 14 6 0.8797 -6.5898 2.6332 15 6 2.1192 -7.4471 2.6293 16 1 3.0953 -6.9851 2.6232 17 6 2.0069 -8.8213 2.6336 18 7 3.0884 -9.5694 2.6308 19 14 0.3185 -9.6205 2.6449 20 1 -0.1365 -9.8359 1.2478 21 1 0.3935 -10.9263 3.3481 22 1 -0.6439 -8.7344 3.3478 23 1 -0.3633 0.0036 1.0277 24 1 -0.3633 0.8883 -0.5169 25 1 -0.3634 -0.8917 -0.5107 26 1 2.7193 -3.1710 -0.5069 27 1 1.0016 -2.7043 -0.5005 28 1 1.0694 -2.4892 1.9689 29 1 2.7871 -2.9559 1.9624 30 1 0.5195 -4.0207 4.2122 31 1 1.8070 -5.1677 4.6538 32 1 2.2070 -3.6822 3.7583 33 1 0.2929 -6.8036 3.5265 34 1 0.2844 -6.8079 1.7465 35 1 3.0095 -10.5362 2.6342 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000126730095.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:08:18 Heat of formation + Delta-G solvation = 18.643579 kcal Electronic energy + Delta-G solvation = -20161.709958 eV Core-core repulsion = 16803.438119 eV Total energy + Delta-G solvation = -3358.271839 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 286.087 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -45.26524 -39.20429 -37.40216 -36.02074 -34.94994 -33.26783 -32.52590 -30.77221 -29.02926 -28.49522 -26.15341 -25.09312 -22.38259 -21.69757 -21.16260 -18.50845 -17.99746 -17.89721 -16.98562 -16.46095 -15.73454 -15.38515 -15.06678 -14.28064 -13.86289 -13.66600 -13.43872 -13.20619 -12.96517 -12.82969 -12.62412 -12.43952 -12.26128 -12.16952 -12.07907 -11.84416 -11.46242 -11.30750 -10.95221 -10.83271 -10.54147 -10.17471 -10.15793 -9.56773 -9.43919 -9.01727 -8.60619 -7.73817 -6.10302 -4.09286 0.89488 0.98842 1.83061 3.27798 3.29677 3.33750 3.35339 3.38596 3.75392 3.87884 4.35456 4.38040 4.60069 4.79600 5.05126 5.17099 5.22326 5.23712 5.26723 5.38593 5.43733 5.53701 5.69617 5.79001 5.81135 6.01509 6.14339 6.15576 6.67105 6.91713 7.29809 7.59080 7.82847 8.20712 8.44983 8.89646 8.95313 9.49873 11.03112 Molecular weight = 286.09amu Principal moments of inertia in cm(-1) A = 0.024875 B = 0.003898 C = 0.003599 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1125.366644 B = 7181.670903 C = 7778.875111 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 C 0.033 3.967 3 N -0.351 5.351 4 O 0.107 5.893 5 C -0.003 4.003 6 Cl 0.053 6.947 7 C -0.160 4.160 8 C -0.031 4.031 9 C -0.133 4.133 10 C 0.507 3.493 11 O -0.541 6.541 12 N -0.598 5.598 13 C 0.083 3.917 14 C 0.215 3.785 15 C -0.529 4.529 16 H 0.074 0.926 17 C 0.072 3.928 18 N -0.897 5.897 19 Si 0.876 3.124 20 H -0.273 1.273 21 H -0.285 1.285 22 H -0.266 1.266 23 H 0.085 0.915 24 H 0.078 0.922 25 H 0.088 0.912 26 H 0.091 0.909 27 H 0.091 0.909 28 H 0.088 0.912 29 H 0.090 0.910 30 H 0.045 0.955 31 H 0.076 0.924 32 H 0.060 0.940 33 H 0.029 0.971 34 H 0.037 0.963 35 H 0.265 0.735 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.582 19.701 -2.052 19.975 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.136 4.136 2 C -0.125 4.125 3 N -0.057 5.057 4 O 0.040 5.960 5 C -0.093 4.093 6 Cl 0.082 6.918 7 C -0.164 4.164 8 C -0.069 4.069 9 C -0.173 4.173 10 C 0.294 3.706 11 O -0.419 6.419 12 N -0.330 5.330 13 C -0.061 4.061 14 C 0.094 3.906 15 C -0.568 4.568 16 H 0.092 0.908 17 C -0.130 4.130 18 N -0.536 5.536 19 Si 0.703 3.297 20 H -0.199 1.199 21 H -0.211 1.211 22 H -0.191 1.191 23 H 0.103 0.897 24 H 0.097 0.903 25 H 0.107 0.893 26 H 0.110 0.890 27 H 0.110 0.890 28 H 0.106 0.894 29 H 0.109 0.891 30 H 0.064 0.936 31 H 0.095 0.905 32 H 0.079 0.921 33 H 0.047 0.953 34 H 0.055 0.945 35 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges -2.693 20.410 -2.580 20.748 hybrid contribution -0.395 -1.374 0.191 1.442 sum -3.088 19.036 -2.389 19.432 Atomic orbital electron populations 1.20249 0.85166 1.04261 1.03897 1.23364 0.99179 0.87886 1.02094 1.73928 0.88602 1.23047 1.20139 1.84893 1.22062 1.20857 1.68190 1.24648 0.91352 0.84748 1.08503 1.98481 1.27994 1.68715 1.96656 1.20998 0.89751 0.98571 1.07122 1.19747 1.04174 0.86088 0.96904 1.21637 1.03473 0.94621 0.97607 1.20252 0.78131 0.88156 0.84056 1.90674 1.51319 1.68765 1.31103 1.47839 1.67574 1.12634 1.04922 1.21672 0.99925 0.97266 0.87271 1.19670 0.96854 0.76703 0.97347 1.21328 0.93161 0.90887 1.51408 0.90778 1.24859 0.96630 0.97090 0.94428 1.69892 1.28054 1.05170 1.50477 0.86847 0.84843 0.79096 0.78875 1.19881 1.21068 1.19081 0.89670 0.90271 0.89342 0.89001 0.89025 0.89362 0.89126 0.93634 0.90537 0.92120 0.95261 0.94515 0.92546 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.62 10.39 36.01 0.37 -0.24 16 2 C 0.03 0.37 7.32 -82.12 -0.60 -0.24 16 3 N -0.35 -4.33 12.07 33.43 0.40 -3.92 16 4 O 0.11 1.30 11.20 17.13 0.19 1.49 16 5 C 0.00 -0.03 8.12 29.82 0.24 0.21 16 6 Cl 0.05 0.57 29.23 -51.86 -1.52 -0.94 16 7 C -0.16 -1.85 5.58 -104.38 -0.58 -2.43 16 8 C -0.03 -0.39 4.90 -27.89 -0.14 -0.53 16 9 C -0.13 -1.77 4.23 -27.88 -0.12 -1.89 16 10 C 0.51 9.69 7.67 -10.98 -0.08 9.61 16 11 O -0.54 -12.56 15.56 5.56 0.09 -12.47 16 12 N -0.60 -11.86 2.86 -182.96 -0.52 -12.38 16 13 C 0.08 1.21 10.24 59.84 0.61 1.82 16 14 C 0.21 5.16 4.23 -5.19 -0.02 5.13 16 15 C -0.53 -15.04 9.94 -34.44 -0.34 -15.38 16 16 H 0.07 2.31 8.06 -52.49 -0.42 1.89 16 17 C 0.07 2.09 5.47 -17.82 -0.10 1.99 16 18 N -0.90 -27.49 13.96 55.43 0.77 -26.72 16 19 Si 0.88 21.32 27.47 -169.99 -4.67 16.65 16 20 H -0.27 -6.68 7.11 56.52 0.40 -6.28 16 21 H -0.28 -6.81 7.11 56.52 0.40 -6.41 16 22 H -0.27 -6.07 6.54 56.52 0.37 -5.70 16 23 H 0.08 0.57 8.14 -51.93 -0.42 0.15 16 24 H 0.08 0.55 8.14 -51.93 -0.42 0.13 16 25 H 0.09 0.63 7.65 -51.93 -0.40 0.23 16 26 H 0.09 1.29 8.10 -51.93 -0.42 0.87 16 27 H 0.09 1.13 7.61 -51.93 -0.39 0.73 16 28 H 0.09 0.96 8.11 -51.93 -0.42 0.54 16 29 H 0.09 1.14 7.40 -51.93 -0.38 0.75 16 30 H 0.05 0.55 8.14 -51.93 -0.42 0.13 16 31 H 0.08 1.18 8.07 -51.93 -0.42 0.76 16 32 H 0.06 0.73 6.44 -51.93 -0.33 0.40 16 33 H 0.03 0.67 7.13 -51.93 -0.37 0.30 16 34 H 0.04 0.94 6.85 -51.93 -0.36 0.58 16 35 H 0.26 7.57 8.31 -40.82 -0.34 7.23 16 LS Contribution 319.34 15.07 4.81 4.81 Total: -1.00 -33.59 319.34 -5.55 -39.14 By element: Atomic # 1 Polarization: 0.65 SS G_CDS: -4.36 Total: -3.70 kcal Atomic # 6 Polarization: -1.19 SS G_CDS: -0.76 Total: -1.95 kcal Atomic # 7 Polarization: -43.68 SS G_CDS: 0.65 Total: -43.03 kcal Atomic # 8 Polarization: -11.26 SS G_CDS: 0.28 Total: -10.98 kcal Atomic # 14 Polarization: 21.32 SS G_CDS: -4.67 Total: 16.65 kcal Atomic # 17 Polarization: 0.57 SS G_CDS: -1.52 Total: -0.94 kcal Total LS contribution 4.81 Total: 4.81 kcal Total: -33.59 -5.55 -39.14 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000126730095.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.780 kcal (2) G-P(sol) polarization free energy of solvation -33.585 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.194 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.551 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.136 kcal (6) G-S(sol) free energy of system = (1) + (5) 18.644 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds