Wall clock time and date at job start Tue Mar 31 2020 06:08:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50693 * 1 3 3 N 1.30213 * 126.79305 * 2 1 4 4 O 1.20923 * 111.64864 * 179.97438 * 3 2 1 5 5 C 1.34061 * 111.55027 * 0.02562 * 4 3 2 6 6 Cl 1.73600 * 126.79752 * 179.97438 * 5 4 3 7 7 C 1.35676 * 106.40782 * 359.97438 * 5 4 3 8 8 C 1.50703 * 128.01454 * 179.97438 * 7 5 4 9 9 C 1.50696 * 109.47425 * 90.01905 * 8 7 5 10 10 O 1.21289 * 119.99917 * 0.02562 * 9 8 7 11 11 N 1.34777 * 119.99940 * 180.02562 * 9 8 7 12 12 C 1.46506 * 119.99535 * 180.02562 * 11 9 8 13 13 C 1.53003 * 109.46599 * 179.97438 * 12 11 9 14 14 C 1.53002 * 109.47075 * 179.97438 * 13 12 11 15 15 C 1.50702 * 109.47113 * 180.02562 * 14 13 12 16 16 H 1.07988 * 120.00015 * 359.97438 * 15 14 13 17 17 C 1.37884 * 119.99600 * 180.02562 * 15 14 13 18 18 N 1.31514 * 119.99876 * 359.97438 * 17 15 14 19 19 Si 1.86798 * 119.99585 * 179.97438 * 17 15 14 20 20 H 1.48503 * 109.47329 * 89.99805 * 19 17 15 21 21 H 1.48505 * 109.46774 * 209.99709 * 19 17 15 22 22 H 1.48502 * 109.47226 * 329.99510 * 19 17 15 23 23 H 1.08997 * 109.47781 * 90.01477 * 1 2 3 24 24 H 1.09000 * 109.47426 * 210.02529 * 1 2 3 25 25 H 1.09005 * 109.46928 * 330.01776 * 1 2 3 26 26 H 1.09002 * 109.47001 * 210.02490 * 8 7 5 27 27 H 1.09007 * 109.46954 * 330.02154 * 8 7 5 28 28 H 0.96998 * 120.00432 * 0.02562 * 11 9 8 29 29 H 1.08997 * 109.46852 * 299.99594 * 12 11 9 30 30 H 1.08990 * 109.47424 * 60.00236 * 12 11 9 31 31 H 1.08997 * 109.47190 * 299.99390 * 13 12 11 32 32 H 1.09007 * 109.47279 * 59.99794 * 13 12 11 33 33 H 1.09002 * 109.47255 * 300.00022 * 14 13 12 34 34 H 1.08999 * 109.47179 * 59.99606 * 14 13 12 35 35 H 0.96998 * 119.99197 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 7 2.2868 1.0428 0.0000 4 8 3.4540 0.7268 0.0005 5 6 3.6036 -0.6054 0.0004 6 17 5.1011 -1.4837 0.0003 7 6 2.3530 -1.1315 0.0003 8 6 1.9578 -2.5858 -0.0005 9 6 1.8259 -3.0712 1.4201 10 8 2.0319 -2.3109 2.3424 11 7 1.4789 -4.3502 1.6656 12 6 1.3500 -4.8219 3.0467 13 6 0.9490 -6.2984 3.0458 14 6 0.8150 -6.7913 4.4881 15 6 0.4206 -8.2458 4.4873 16 1 0.2792 -8.7664 3.5518 17 6 0.2393 -8.9115 5.6811 18 7 0.4110 -8.2773 6.8203 19 14 -0.2503 -10.7142 5.6801 20 1 0.9711 -11.5589 5.6803 21 1 -1.0562 -11.0089 6.8921 22 1 -1.0550 -11.0079 4.4670 23 1 -0.3634 -0.0003 -1.0276 24 1 -0.3634 -0.8897 0.5142 25 1 -0.3633 0.8902 0.5136 26 1 1.0039 -2.7028 -0.5146 27 1 2.7216 -3.1695 -0.5144 28 1 1.3145 -4.9583 0.9281 29 1 2.3037 -4.7043 3.5612 30 1 0.5858 -4.2385 3.5601 31 1 -0.0048 -6.4155 2.5315 32 1 1.7129 -6.8822 2.5322 33 1 1.7690 -6.6742 5.0022 34 1 0.0514 -6.2076 5.0021 35 1 0.2838 -8.7458 7.6601 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000171592775.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:08:56 Heat of formation + Delta-G solvation = 0.481729 kcal Electronic energy + Delta-G solvation = -19484.530181 eV Core-core repulsion = 16125.470785 eV Total energy + Delta-G solvation = -3359.059396 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 286.087 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -45.30046 -39.62483 -37.49306 -35.85785 -35.24414 -33.37657 -32.70008 -31.31305 -29.38864 -28.82623 -26.54641 -23.43996 -22.22475 -21.73806 -20.79619 -19.98100 -18.14484 -17.99649 -16.85574 -16.49381 -16.01088 -15.61273 -15.14731 -14.50516 -14.34040 -13.75502 -13.72961 -13.53727 -13.35774 -12.96477 -12.68843 -12.52142 -12.31813 -12.16966 -11.86439 -11.68459 -11.17380 -10.93145 -10.78080 -10.62762 -10.32037 -9.97886 -9.91150 -9.56956 -9.34222 -9.14213 -8.86208 -8.40221 -6.04768 -4.08106 0.77588 0.96974 1.77582 2.65481 3.22651 3.28593 3.35151 3.37410 3.43215 3.74998 4.22566 4.41633 4.52178 4.55578 4.88084 5.06019 5.18157 5.24255 5.31104 5.33807 5.38740 5.66795 5.72547 5.77740 6.10967 6.40481 6.54702 6.77024 6.95526 7.59906 7.60649 7.72135 7.80244 7.93728 8.28158 8.35090 8.98648 9.56306 11.06508 Molecular weight = 286.09amu Principal moments of inertia in cm(-1) A = 0.031192 B = 0.002739 C = 0.002630 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 897.447583 B =10220.137080 C =10645.327426 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 C 0.045 3.955 3 N -0.348 5.348 4 O 0.109 5.891 5 C 0.013 3.987 6 Cl 0.049 6.951 7 C -0.148 4.148 8 C -0.069 4.069 9 C 0.508 3.492 10 O -0.534 6.534 11 N -0.724 5.724 12 C 0.117 3.883 13 C -0.121 4.121 14 C 0.024 3.976 15 C -0.523 4.523 16 H 0.055 0.945 17 C 0.057 3.943 18 N -0.893 5.893 19 Si 0.893 3.107 20 H -0.280 1.280 21 H -0.286 1.286 22 H -0.274 1.274 23 H 0.084 0.916 24 H 0.085 0.915 25 H 0.081 0.919 26 H 0.114 0.886 27 H 0.110 0.890 28 H 0.399 0.601 29 H 0.064 0.936 30 H 0.064 0.936 31 H 0.054 0.946 32 H 0.054 0.946 33 H 0.019 0.981 34 H 0.019 0.981 35 H 0.261 0.739 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.044 14.047 -18.694 23.731 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.135 4.135 2 C -0.114 4.114 3 N -0.055 5.055 4 O 0.043 5.957 5 C -0.077 4.077 6 Cl 0.078 6.922 7 C -0.154 4.154 8 C -0.110 4.110 9 C 0.293 3.707 10 O -0.410 6.410 11 N -0.375 5.375 12 C -0.006 4.006 13 C -0.159 4.159 14 C -0.014 4.014 15 C -0.562 4.562 16 H 0.074 0.926 17 C -0.145 4.145 18 N -0.532 5.532 19 Si 0.721 3.279 20 H -0.206 1.206 21 H -0.212 1.212 22 H -0.199 1.199 23 H 0.103 0.897 24 H 0.104 0.896 25 H 0.100 0.900 26 H 0.132 0.868 27 H 0.128 0.872 28 H 0.233 0.767 29 H 0.083 0.917 30 H 0.083 0.917 31 H 0.073 0.927 32 H 0.073 0.927 33 H 0.037 0.963 34 H 0.037 0.963 35 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges 4.104 15.807 -17.804 24.160 hybrid contribution -0.088 -2.215 -0.164 2.223 sum 4.016 13.592 -17.968 22.885 Atomic orbital electron populations 1.20235 0.85181 1.04601 1.03518 1.23249 0.99107 0.87692 1.01348 1.73917 0.88478 1.22876 1.20240 1.84901 1.22151 1.20530 1.68114 1.24483 0.90898 0.84987 1.07341 1.98460 1.28208 1.68919 1.96648 1.20101 0.90089 0.96844 1.08330 1.20015 1.04995 0.89641 0.96340 1.20301 0.77428 0.82440 0.90541 1.90743 1.49388 1.54909 1.46005 1.46177 1.70053 1.10997 1.10312 1.21664 1.01659 0.96628 0.80639 1.21891 1.00194 0.91380 1.02392 1.19030 0.97535 0.95913 0.88931 1.21196 1.46978 0.95669 0.92318 0.92632 1.25035 0.95475 0.98291 0.95665 1.69965 1.49480 1.36481 0.97308 0.86581 0.78554 0.85242 0.77534 1.20648 1.21195 1.19875 0.89708 0.89616 0.89985 0.86827 0.87173 0.76688 0.91725 0.91732 0.92679 0.92685 0.96293 0.96286 0.92895 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.64 10.39 36.00 0.37 -0.26 16 2 C 0.04 0.51 7.32 -82.13 -0.60 -0.09 16 3 N -0.35 -4.49 12.07 33.44 0.40 -4.09 16 4 O 0.11 1.37 11.20 17.12 0.19 1.56 16 5 C 0.01 0.15 8.12 29.82 0.24 0.39 16 6 Cl 0.05 0.48 29.23 -51.86 -1.52 -1.04 16 7 C -0.15 -1.65 4.82 -104.38 -0.50 -2.15 16 8 C -0.07 -0.62 6.10 -29.04 -0.18 -0.79 16 9 C 0.51 6.69 7.82 -10.99 -0.09 6.60 16 10 O -0.53 -9.51 16.03 5.55 0.09 -9.42 16 11 N -0.72 -9.19 5.56 -60.29 -0.33 -9.52 16 12 C 0.12 1.94 5.67 -4.04 -0.02 1.92 16 13 C -0.12 -2.24 5.27 -26.73 -0.14 -2.38 16 14 C 0.02 0.58 4.97 -27.88 -0.14 0.45 16 15 C -0.52 -14.35 9.11 -34.44 -0.31 -14.66 16 16 H 0.06 1.46 7.74 -52.49 -0.41 1.05 16 17 C 0.06 1.60 5.46 -17.82 -0.10 1.50 16 18 N -0.89 -26.55 13.29 55.43 0.74 -25.81 16 19 Si 0.89 21.18 29.54 -169.99 -5.02 16.16 16 20 H -0.28 -6.56 7.11 56.52 0.40 -6.16 16 21 H -0.29 -6.75 7.11 56.52 0.40 -6.35 16 22 H -0.27 -6.32 7.11 56.52 0.40 -5.92 16 23 H 0.08 0.49 8.14 -51.93 -0.42 0.07 16 24 H 0.09 0.67 8.14 -51.93 -0.42 0.25 16 25 H 0.08 0.66 8.14 -51.93 -0.42 0.23 16 26 H 0.11 0.67 8.14 -51.93 -0.42 0.25 16 27 H 0.11 0.74 8.14 -51.93 -0.42 0.32 16 28 H 0.40 3.77 8.47 -40.82 -0.35 3.43 16 29 H 0.06 1.16 8.14 -51.93 -0.42 0.74 16 30 H 0.06 1.15 8.14 -51.93 -0.42 0.73 16 31 H 0.05 0.98 8.14 -51.93 -0.42 0.55 16 32 H 0.05 0.98 8.14 -51.93 -0.42 0.56 16 33 H 0.02 0.50 8.14 -51.93 -0.42 0.08 16 34 H 0.02 0.50 8.14 -51.93 -0.42 0.08 16 35 H 0.26 7.33 8.31 -40.82 -0.34 6.99 16 LS Contribution 327.38 15.07 4.93 4.93 Total: -1.00 -33.30 327.38 -6.52 -39.82 By element: Atomic # 1 Polarization: 1.43 SS G_CDS: -4.54 Total: -3.11 kcal Atomic # 6 Polarization: -8.02 SS G_CDS: -1.46 Total: -9.48 kcal Atomic # 7 Polarization: -40.23 SS G_CDS: 0.80 Total: -39.42 kcal Atomic # 8 Polarization: -8.15 SS G_CDS: 0.28 Total: -7.87 kcal Atomic # 14 Polarization: 21.18 SS G_CDS: -5.02 Total: 16.16 kcal Atomic # 17 Polarization: 0.48 SS G_CDS: -1.52 Total: -1.04 kcal Total LS contribution 4.93 Total: 4.93 kcal Total: -33.30 -6.52 -39.82 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000171592775.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 40.301 kcal (2) G-P(sol) polarization free energy of solvation -33.300 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.002 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.520 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.820 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.482 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds