Wall clock time and date at job start Tue Mar 31 2020 06:12:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.50698 * 109.46969 * 2 1 4 4 N 1.30398 * 125.98142 * 269.99731 * 3 2 1 5 5 N 1.39915 * 108.98710 * 179.97438 * 4 3 2 6 6 C 1.46490 * 125.74310 * 180.02562 * 5 4 3 7 7 C 1.34317 * 108.52065 * 0.02562 * 5 4 3 8 8 Cl 1.73603 * 126.32644 * 179.97438 * 7 5 4 9 9 C 1.38365 * 107.35374 * 359.97438 * 7 5 4 10 10 C 1.47148 * 126.44856 * 179.73992 * 9 7 5 11 11 O 1.21539 * 120.00096 * 90.02422 * 10 9 7 12 12 O 1.34771 * 119.99691 * 270.01875 * 10 9 7 13 13 C 1.45203 * 116.99837 * 179.97438 * 12 10 9 14 14 C 1.53001 * 109.47143 * 180.02562 * 13 12 10 15 15 C 1.50694 * 109.47398 * 180.02562 * 14 13 12 16 16 H 1.08004 * 119.99983 * 359.97438 * 15 14 13 17 17 C 1.37881 * 120.00586 * 180.02562 * 15 14 13 18 18 N 1.31506 * 120.00112 * 179.97438 * 17 15 14 19 19 Si 1.86798 * 119.99511 * 0.02562 * 17 15 14 20 20 H 1.48499 * 109.47362 * 89.99824 * 19 17 15 21 21 H 1.48505 * 109.46917 * 210.00030 * 19 17 15 22 22 H 1.48502 * 109.47213 * 329.99619 * 19 17 15 23 23 H 1.09003 * 109.47415 * 180.02562 * 1 2 3 24 24 H 1.09003 * 109.47292 * 299.99797 * 1 2 3 25 25 H 1.08996 * 109.47510 * 60.00207 * 1 2 3 26 26 H 1.09004 * 109.47106 * 239.99683 * 2 1 3 27 27 H 1.08997 * 109.46790 * 119.99977 * 2 1 3 28 28 H 1.09001 * 109.47316 * 269.96432 * 6 5 4 29 29 H 1.09000 * 109.47145 * 29.96106 * 6 5 4 30 30 H 1.09001 * 109.47746 * 149.95982 * 6 5 4 31 31 H 1.08995 * 109.47341 * 300.00288 * 13 12 10 32 32 H 1.08999 * 109.47093 * 60.00588 * 13 12 10 33 33 H 1.09000 * 109.47396 * 300.00378 * 14 13 12 34 34 H 1.09004 * 109.47332 * 59.99965 * 14 13 12 35 35 H 0.97001 * 119.99833 * 179.97438 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0323 1.4208 0.0000 4 7 2.2877 2.1431 -1.0552 5 7 2.7331 3.4049 -0.6463 6 6 3.1210 4.5043 -1.5332 7 6 2.7451 3.4385 0.6964 8 17 3.2203 4.7825 1.6872 9 6 2.3089 2.2042 1.1442 10 6 2.1661 1.7835 2.5470 11 8 1.1151 1.9617 3.1309 12 8 3.2007 1.2007 3.1843 13 6 2.9885 0.8121 4.5672 14 6 4.2644 0.1728 5.1188 15 6 4.0441 -0.2311 6.5538 16 1 3.0896 -0.0495 7.0255 17 6 5.0613 -0.8315 7.2651 18 7 4.8691 -1.1834 8.5175 19 14 6.7128 -1.1437 6.4500 20 1 7.5970 0.0313 6.6570 21 1 7.3413 -2.3480 7.0501 22 1 6.5132 -1.3627 4.9949 23 1 -0.3634 -1.0277 0.0005 24 1 -0.3634 0.5138 0.8900 25 1 -0.3634 0.5138 -0.8899 26 1 1.8933 -0.5139 -0.8900 27 1 1.8933 -0.5138 0.8900 28 1 4.1865 4.4353 -1.7528 29 1 2.5538 4.4395 -2.4617 30 1 2.9115 5.4562 -1.0452 31 1 2.7395 1.6935 5.1582 32 1 2.1696 0.0949 4.6216 33 1 4.5140 -0.7085 4.5279 34 1 5.0832 0.8903 5.0645 35 1 5.5847 -1.6062 9.0178 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000179707257.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:12:05 Heat of formation + Delta-G solvation = -26.812350 kcal Electronic energy + Delta-G solvation = -20092.725340 eV Core-core repulsion = 16732.482383 eV Total energy + Delta-G solvation = -3360.242956 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 286.087 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -41.76033 -39.61357 -37.31497 -36.09883 -35.05219 -33.28563 -32.17238 -30.97276 -30.31900 -27.44989 -25.38329 -24.05768 -22.81202 -20.93740 -20.59913 -19.92233 -18.01776 -17.13650 -16.48786 -16.17721 -16.02079 -15.80113 -15.05159 -14.49798 -14.20195 -13.84130 -13.47159 -13.40142 -13.16716 -12.97379 -12.80670 -12.45606 -12.04189 -11.98550 -11.72596 -11.48962 -11.39088 -11.27677 -10.89406 -10.67351 -10.64663 -10.00235 -9.91693 -9.67631 -9.58447 -9.32998 -8.93788 -8.60720 -6.11406 -4.12348 0.98072 1.12210 2.01896 2.15199 2.33809 3.22513 3.29343 3.36723 3.41622 4.02013 4.40256 4.41104 4.69790 4.75298 4.96639 4.99245 5.15680 5.16541 5.22388 5.23378 5.42077 5.77838 5.86202 5.95996 5.99626 6.00724 6.13070 6.22713 6.47326 6.75725 7.13486 7.19745 7.24219 7.64081 8.11999 8.41427 8.90575 9.48399 11.01163 Molecular weight = 286.09amu Principal moments of inertia in cm(-1) A = 0.018943 B = 0.004253 C = 0.003915 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1477.798309 B = 6582.158185 C = 7149.873424 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C -0.051 4.051 3 C 0.133 3.867 4 N -0.271 5.271 5 N -0.353 5.353 6 C 0.093 3.907 7 C 0.164 3.836 8 Cl 0.018 6.982 9 C -0.232 4.232 10 C 0.541 3.459 11 O -0.496 6.496 12 O -0.350 6.350 13 C 0.081 3.919 14 C -0.009 4.009 15 C -0.527 4.527 16 H 0.076 0.924 17 C 0.073 3.927 18 N -0.897 5.897 19 Si 0.880 3.120 20 H -0.275 1.275 21 H -0.286 1.286 22 H -0.263 1.263 23 H 0.068 0.932 24 H 0.063 0.937 25 H 0.057 0.943 26 H 0.089 0.911 27 H 0.091 0.909 28 H 0.086 0.914 29 H 0.100 0.900 30 H 0.092 0.908 31 H 0.066 0.934 32 H 0.067 0.933 33 H 0.029 0.971 34 H 0.024 0.976 35 H 0.266 0.734 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.114 10.128 -22.188 24.734 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.090 4.090 3 C -0.034 4.034 4 N -0.093 5.093 5 N -0.134 5.134 6 C -0.048 4.048 7 C 0.007 3.993 8 Cl 0.046 6.954 9 C -0.246 4.246 10 C 0.382 3.618 11 O -0.383 6.383 12 O -0.266 6.266 13 C 0.008 3.992 14 C -0.047 4.047 15 C -0.564 4.564 16 H 0.094 0.906 17 C -0.129 4.129 18 N -0.535 5.535 19 Si 0.706 3.294 20 H -0.201 1.201 21 H -0.212 1.212 22 H -0.187 1.187 23 H 0.087 0.913 24 H 0.082 0.918 25 H 0.076 0.924 26 H 0.108 0.892 27 H 0.110 0.890 28 H 0.104 0.896 29 H 0.118 0.882 30 H 0.111 0.889 31 H 0.084 0.916 32 H 0.086 0.914 33 H 0.047 0.953 34 H 0.042 0.958 35 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges -4.214 10.374 -23.087 25.659 hybrid contribution 0.984 0.205 0.789 1.278 sum -3.231 10.579 -22.298 24.891 Atomic orbital electron populations 1.21737 0.93380 1.02646 1.02777 1.20159 0.96891 0.87363 1.04606 1.22313 0.96195 0.97024 0.87845 1.77262 1.21437 0.89289 1.21295 1.48316 1.50376 1.12265 1.02488 1.22092 1.02362 0.85843 0.94457 1.21851 1.01507 0.91632 0.84313 1.98454 1.89738 1.41792 1.65372 1.18973 1.18781 0.93927 0.92897 1.19791 0.82098 0.74726 0.85173 1.90842 1.28724 1.51567 1.67209 1.86653 1.40148 1.69679 1.30143 1.23451 1.01588 0.99462 0.74697 1.19627 0.92090 0.96172 0.96772 1.20844 1.01366 1.40350 0.93889 0.90581 1.24921 0.98716 0.94671 0.94621 1.69892 1.33516 1.41247 1.08870 0.86775 0.84045 0.78091 0.80462 1.20079 1.21170 1.18707 0.91310 0.91759 0.92358 0.89220 0.89038 0.89575 0.88153 0.88932 0.91565 0.91436 0.95313 0.95809 0.92451 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.52 9.89 37.16 0.37 -1.15 16 2 C -0.05 -0.58 6.33 -27.88 -0.18 -0.76 16 3 C 0.13 1.83 6.52 -82.00 -0.53 1.29 16 4 N -0.27 -3.51 12.49 33.91 0.42 -3.09 16 5 N -0.35 -4.05 3.98 -64.31 -0.26 -4.30 16 6 C 0.09 0.58 11.28 59.84 0.67 1.26 16 7 C 0.16 2.21 7.54 -16.42 -0.12 2.09 16 8 Cl 0.02 0.22 28.56 -51.86 -1.48 -1.26 16 9 C -0.23 -3.63 6.01 -105.03 -0.63 -4.26 16 10 C 0.54 9.98 7.34 34.35 0.25 10.23 16 11 O -0.50 -10.09 16.90 -19.30 -0.33 -10.42 16 12 O -0.35 -6.98 10.23 -40.68 -0.42 -7.40 16 13 C 0.08 1.74 5.42 37.16 0.20 1.94 16 14 C -0.01 -0.22 4.42 -27.89 -0.12 -0.35 16 15 C -0.53 -14.96 9.66 -34.44 -0.33 -15.29 16 16 H 0.08 2.31 7.99 -52.48 -0.42 1.89 16 17 C 0.07 2.11 5.47 -17.82 -0.10 2.01 16 18 N -0.90 -27.34 13.96 55.43 0.77 -26.57 16 19 Si 0.88 21.46 27.47 -169.99 -4.67 16.79 16 20 H -0.28 -6.59 7.11 56.52 0.40 -6.18 16 21 H -0.29 -6.87 7.11 56.52 0.40 -6.47 16 22 H -0.26 -6.18 6.54 56.52 0.37 -5.81 16 23 H 0.07 0.58 8.14 -51.93 -0.42 0.16 16 24 H 0.06 0.78 8.14 -51.93 -0.42 0.36 16 25 H 0.06 0.56 8.14 -51.93 -0.42 0.14 16 26 H 0.09 0.84 8.14 -51.93 -0.42 0.42 16 27 H 0.09 1.09 8.00 -51.93 -0.42 0.68 16 28 H 0.09 0.42 8.14 -51.93 -0.42 0.00 16 29 H 0.10 0.47 8.14 -51.93 -0.42 0.05 16 30 H 0.09 0.43 7.77 -51.93 -0.40 0.03 16 31 H 0.07 1.43 8.14 -51.93 -0.42 1.01 16 32 H 0.07 1.44 8.14 -51.93 -0.42 1.02 16 33 H 0.03 0.69 7.20 -51.93 -0.37 0.32 16 34 H 0.02 0.57 7.57 -51.93 -0.39 0.17 16 35 H 0.27 7.54 8.31 -40.82 -0.34 7.20 16 LS Contribution 326.19 15.07 4.92 4.92 Total: -1.00 -33.23 326.19 -6.11 -39.35 By element: Atomic # 1 Polarization: -0.47 SS G_CDS: -4.55 Total: -5.02 kcal Atomic # 6 Polarization: -2.47 SS G_CDS: -0.52 Total: -2.99 kcal Atomic # 7 Polarization: -34.90 SS G_CDS: 0.94 Total: -33.96 kcal Atomic # 8 Polarization: -17.07 SS G_CDS: -0.74 Total: -17.81 kcal Atomic # 14 Polarization: 21.46 SS G_CDS: -4.67 Total: 16.79 kcal Atomic # 17 Polarization: 0.22 SS G_CDS: -1.48 Total: -1.26 kcal Total LS contribution 4.92 Total: 4.92 kcal Total: -33.23 -6.11 -39.35 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000179707257.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 12.534 kcal (2) G-P(sol) polarization free energy of solvation -33.233 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.699 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.113 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.346 kcal (6) G-S(sol) free energy of system = (1) + (5) -26.812 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds