Wall clock time and date at job start Tue Mar 31 2020 06:08:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 N 1.30216 * 126.78895 * 2 1 4 4 O 1.20923 * 111.64257 * 180.28132 * 3 2 1 5 5 C 1.34068 * 111.55182 * 359.70605 * 4 3 2 6 6 Cl 1.73601 * 126.79634 * 180.02562 * 5 4 3 7 7 C 1.35673 * 106.40806 * 359.97438 * 5 4 3 8 8 C 1.50704 * 128.01762 * 180.02562 * 7 5 4 9 9 C 1.52999 * 109.47036 * 90.01895 * 8 7 5 10 10 C 1.50703 * 109.46585 * 180.02562 * 9 8 7 11 11 O 1.21279 * 120.00336 * 0.02562 * 10 9 8 12 12 N 1.34780 * 119.99852 * 180.02562 * 10 9 8 13 13 C 1.46497 * 120.00312 * 180.02562 * 12 10 9 14 14 H 1.09003 * 109.46824 * 324.99495 * 13 12 10 15 15 C 1.52998 * 109.47488 * 84.99823 * 13 12 10 16 16 C 1.50704 * 109.47156 * 205.00023 * 13 12 10 17 17 H 1.07992 * 120.00120 * 356.68518 * 16 13 12 18 18 C 1.37875 * 119.99522 * 176.68397 * 16 13 12 19 19 N 1.31513 * 120.00501 * 352.38401 * 18 16 13 20 20 Si 1.86806 * 119.99715 * 172.66612 * 18 16 13 21 21 H 1.48497 * 109.47165 * 264.79730 * 20 18 16 22 22 H 1.48503 * 109.46939 * 24.79275 * 20 18 16 23 23 H 1.48498 * 109.47436 * 144.79640 * 20 18 16 24 24 H 1.09000 * 109.47749 * 270.20570 * 1 2 3 25 25 H 1.09007 * 109.47037 * 30.20593 * 1 2 3 26 26 H 1.08998 * 109.47557 * 150.19835 * 1 2 3 27 27 H 1.09000 * 109.46522 * 330.02111 * 8 7 5 28 28 H 1.08992 * 109.47373 * 210.02485 * 8 7 5 29 29 H 1.09000 * 109.47289 * 60.00685 * 9 8 7 30 30 H 1.09000 * 109.47408 * 299.99873 * 9 8 7 31 31 H 0.97006 * 119.99961 * 0.02562 * 12 10 9 32 32 H 1.09001 * 109.47019 * 297.81934 * 15 13 12 33 33 H 1.09001 * 109.47267 * 57.81201 * 15 13 12 34 34 H 1.08995 * 109.47232 * 177.81999 * 15 13 12 35 35 H 0.96997 * 120.00137 * 180.27656 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2868 1.0428 0.0000 4 8 3.4541 0.7269 -0.0055 5 6 3.6036 -0.6054 -0.0036 6 17 5.1011 -1.4836 -0.0091 7 6 2.3531 -1.1315 0.0046 8 6 1.9579 -2.5858 0.0104 9 6 1.8317 -3.0742 1.4548 10 6 1.4371 -4.5286 1.4605 11 8 1.2734 -5.1167 0.4125 12 7 1.2661 -5.1759 2.6303 13 6 0.8830 -6.5899 2.6359 14 1 0.2153 -6.7888 1.7976 15 6 2.1361 -7.4583 2.5070 16 6 0.1778 -6.9142 3.9276 17 1 0.0770 -6.1583 4.6923 18 6 -0.3386 -8.1760 4.1331 19 7 -0.3503 -9.0499 3.1504 20 14 -1.0291 -8.6416 5.8052 21 1 0.0191 -9.3320 6.5988 22 1 -1.4637 -7.4149 6.5204 23 1 -2.1916 -9.5481 5.6258 24 1 -0.3634 0.0037 1.0276 25 1 -0.3633 0.8882 -0.5171 26 1 -0.3634 -0.8917 -0.5107 27 1 2.7188 -3.1710 -0.5059 28 1 1.0012 -2.7043 -0.4982 29 1 1.0707 -2.4890 1.9711 30 1 2.7885 -2.9557 1.9634 31 1 1.3966 -4.7055 3.4685 32 1 2.6250 -7.2516 1.5550 33 1 2.8210 -7.2314 3.3239 34 1 1.8549 -8.5105 2.5501 35 1 -0.7173 -9.9362 3.2938 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000194628667.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:08:24 Heat of formation + Delta-G solvation = 2.111974 kcal Electronic energy + Delta-G solvation = -19916.815734 eV Core-core repulsion = 16557.827031 eV Total energy + Delta-G solvation = -3358.988704 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 286.087 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -45.27156 -39.00909 -37.44615 -36.02296 -34.80283 -33.19454 -32.37259 -30.77823 -29.07421 -28.79220 -25.37582 -25.11363 -21.91802 -21.62617 -20.72556 -19.40177 -18.09667 -17.89713 -17.11051 -15.88486 -15.67724 -15.23568 -14.88177 -14.27210 -13.89178 -13.63077 -13.39100 -13.07954 -12.85303 -12.79463 -12.57426 -12.44640 -12.26037 -11.93712 -11.73553 -11.31763 -11.07346 -11.00942 -10.86406 -10.76271 -10.35653 -10.29571 -10.16608 -9.47170 -9.12336 -8.97612 -8.53407 -7.94635 -6.16072 -4.22548 0.85611 0.97728 1.83239 3.22840 3.30197 3.31819 3.37305 3.37571 3.78699 4.08628 4.33738 4.39921 4.59979 4.93155 5.06904 5.17642 5.25929 5.27535 5.33027 5.42545 5.58145 5.77660 5.81518 6.00995 6.14967 6.75801 6.89272 7.08271 7.42151 7.53499 7.66165 7.82608 7.84808 8.06402 8.65035 8.76977 9.10671 9.44184 10.92035 Molecular weight = 286.09amu Principal moments of inertia in cm(-1) A = 0.026405 B = 0.003379 C = 0.003187 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1060.144909 B = 8285.330936 C = 8784.739244 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 C 0.034 3.966 3 N -0.350 5.350 4 O 0.107 5.893 5 C -0.004 4.004 6 Cl 0.050 6.950 7 C -0.159 4.159 8 C -0.030 4.030 9 C -0.137 4.137 10 C 0.502 3.498 11 O -0.556 6.556 12 N -0.709 5.709 13 C 0.262 3.738 14 H 0.053 0.947 15 C -0.142 4.142 16 C -0.536 4.536 17 H 0.061 0.939 18 C 0.068 3.932 19 N -0.882 5.882 20 Si 0.898 3.102 21 H -0.280 1.280 22 H -0.273 1.273 23 H -0.285 1.285 24 H 0.086 0.914 25 H 0.079 0.921 26 H 0.089 0.911 27 H 0.089 0.911 28 H 0.092 0.908 29 H 0.089 0.911 30 H 0.088 0.912 31 H 0.389 0.611 32 H 0.018 0.982 33 H 0.027 0.973 34 H 0.077 0.923 35 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.535 16.674 -4.682 18.511 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.137 4.137 2 C -0.124 4.124 3 N -0.057 5.057 4 O 0.040 5.960 5 C -0.094 4.094 6 Cl 0.078 6.922 7 C -0.163 4.163 8 C -0.068 4.068 9 C -0.178 4.178 10 C 0.286 3.714 11 O -0.435 6.435 12 N -0.357 5.357 13 C 0.160 3.840 14 H 0.071 0.929 15 C -0.201 4.201 16 C -0.574 4.574 17 H 0.079 0.921 18 C -0.136 4.136 19 N -0.519 5.519 20 Si 0.726 3.274 21 H -0.206 1.206 22 H -0.198 1.198 23 H -0.211 1.211 24 H 0.104 0.896 25 H 0.097 0.903 26 H 0.107 0.893 27 H 0.108 0.892 28 H 0.111 0.889 29 H 0.108 0.892 30 H 0.106 0.894 31 H 0.221 0.779 32 H 0.037 0.963 33 H 0.047 0.953 34 H 0.095 0.905 35 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges 6.265 17.256 -5.463 19.154 hybrid contribution -0.016 -0.929 1.403 1.683 sum 6.249 16.327 -4.060 17.948 Atomic orbital electron populations 1.20266 0.85071 1.04310 1.04036 1.23389 0.99242 0.87849 1.01946 1.73938 0.88574 1.23029 1.20128 1.84897 1.22101 1.20813 1.68207 1.24605 0.91152 0.84804 1.08825 1.98466 1.28147 1.68875 1.96713 1.21020 0.89714 0.98657 1.06936 1.19727 1.04124 0.85956 0.96952 1.21643 1.03497 0.95024 0.97589 1.20333 0.78109 0.88150 0.84787 1.90662 1.52263 1.68970 1.31630 1.46526 1.67922 1.14417 1.06795 1.18747 0.92742 0.74087 0.98394 0.92872 1.22011 0.97921 1.03203 0.96977 1.21203 1.37513 0.97456 1.01256 0.92071 1.24889 0.95331 0.96354 0.96998 1.69966 1.44940 1.06193 1.30775 0.86487 0.78579 0.78514 0.83842 1.20562 1.19821 1.21101 0.89556 0.90262 0.89258 0.89204 0.88942 0.89223 0.89384 0.77918 0.96282 0.95350 0.90458 0.92573 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.66 10.39 36.01 0.37 -0.29 16 2 C 0.03 0.38 7.32 -82.12 -0.60 -0.22 16 3 N -0.35 -4.34 12.07 33.44 0.40 -3.94 16 4 O 0.11 1.28 11.20 17.10 0.19 1.47 16 5 C 0.00 -0.05 8.12 29.81 0.24 0.20 16 6 Cl 0.05 0.49 29.23 -51.86 -1.52 -1.03 16 7 C -0.16 -1.80 5.58 -104.38 -0.58 -2.39 16 8 C -0.03 -0.36 4.90 -27.88 -0.14 -0.50 16 9 C -0.14 -1.77 5.68 -27.88 -0.16 -1.93 16 10 C 0.50 9.27 7.79 -10.98 -0.09 9.18 16 11 O -0.56 -12.46 15.64 5.56 0.09 -12.38 16 12 N -0.71 -14.09 5.07 -54.93 -0.28 -14.37 16 13 C 0.26 6.51 2.45 -69.08 -0.17 6.35 16 14 H 0.05 1.54 7.57 -51.93 -0.39 1.15 16 15 C -0.14 -3.44 9.32 37.16 0.35 -3.09 16 16 C -0.54 -13.96 8.69 -34.44 -0.30 -14.26 16 17 H 0.06 1.52 7.73 -52.49 -0.41 1.12 16 18 C 0.07 1.81 5.21 -17.82 -0.09 1.71 16 19 N -0.88 -24.72 11.92 55.43 0.66 -24.06 16 20 Si 0.90 20.35 29.54 -169.99 -5.02 15.33 16 21 H -0.28 -6.28 7.11 56.52 0.40 -5.88 16 22 H -0.27 -6.07 7.11 56.52 0.40 -5.67 16 23 H -0.29 -6.48 7.11 56.52 0.40 -6.08 16 24 H 0.09 0.64 8.14 -51.93 -0.42 0.22 16 25 H 0.08 0.59 8.14 -51.93 -0.42 0.16 16 26 H 0.09 0.68 7.65 -51.93 -0.40 0.29 16 27 H 0.09 1.17 8.10 -51.93 -0.42 0.75 16 28 H 0.09 1.14 7.61 -51.93 -0.39 0.75 16 29 H 0.09 1.00 8.14 -51.93 -0.42 0.58 16 30 H 0.09 1.01 8.14 -51.93 -0.42 0.59 16 31 H 0.39 6.63 8.53 -40.82 -0.35 6.28 16 32 H 0.02 0.43 8.14 -51.93 -0.42 0.01 16 33 H 0.03 0.63 8.14 -51.93 -0.42 0.20 16 34 H 0.08 2.03 6.60 -51.93 -0.34 1.69 16 35 H 0.26 7.02 8.31 -40.82 -0.34 6.69 16 LS Contribution 322.40 15.07 4.86 4.86 Total: -1.00 -30.36 322.40 -6.15 -36.51 By element: Atomic # 1 Polarization: 7.22 SS G_CDS: -4.37 Total: 2.84 kcal Atomic # 6 Polarization: -4.07 SS G_CDS: -1.16 Total: -5.23 kcal Atomic # 7 Polarization: -43.16 SS G_CDS: 0.79 Total: -42.37 kcal Atomic # 8 Polarization: -11.19 SS G_CDS: 0.28 Total: -10.91 kcal Atomic # 14 Polarization: 20.35 SS G_CDS: -5.02 Total: 15.33 kcal Atomic # 17 Polarization: 0.49 SS G_CDS: -1.52 Total: -1.03 kcal Total LS contribution 4.86 Total: 4.86 kcal Total: -30.36 -6.15 -36.51 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000194628667.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.620 kcal (2) G-P(sol) polarization free energy of solvation -30.356 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.264 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.152 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.508 kcal (6) G-S(sol) free energy of system = (1) + (5) 2.112 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds