Wall clock time and date at job start Tue Mar 31 2020 06:08:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 N 1.30206 * 126.79261 * 2 1 4 4 O 1.20920 * 111.64610 * 180.29156 * 3 2 1 5 5 C 1.34057 * 111.55483 * 359.69853 * 4 3 2 6 6 Cl 1.73602 * 126.80264 * 180.02562 * 5 4 3 7 7 C 1.35682 * 106.40626 * 0.02562 * 5 4 3 8 8 C 1.50697 * 128.01459 * 180.02562 * 7 5 4 9 9 C 1.52997 * 109.47466 * 90.02294 * 8 7 5 10 10 C 1.50701 * 109.47212 * 179.97438 * 9 8 7 11 11 O 1.21280 * 119.99781 * 0.02562 * 10 9 8 12 12 N 1.34780 * 119.99795 * 179.97438 * 10 9 8 13 13 C 1.46497 * 119.99566 * 180.02562 * 12 10 9 14 14 C 1.52997 * 109.46983 * 180.02562 * 13 12 10 15 15 C 1.50697 * 109.47466 * 180.02562 * 14 13 12 16 16 H 1.08006 * 119.99920 * 359.97438 * 15 14 13 17 17 C 1.37876 * 120.00428 * 180.02562 * 15 14 13 18 18 N 1.31520 * 119.99996 * 359.97438 * 17 15 14 19 19 Si 1.86805 * 120.00227 * 179.97438 * 17 15 14 20 20 H 1.48496 * 109.46873 * 60.00019 * 19 17 15 21 21 H 1.48503 * 109.47134 * 179.97438 * 19 17 15 22 22 H 1.48494 * 109.46938 * 300.00027 * 19 17 15 23 23 H 1.09007 * 109.46930 * 270.20164 * 1 2 3 24 24 H 1.09001 * 109.46764 * 30.19523 * 1 2 3 25 25 H 1.08995 * 109.47444 * 150.20042 * 1 2 3 26 26 H 1.09002 * 109.47120 * 330.02047 * 8 7 5 27 27 H 1.08998 * 109.46862 * 210.02849 * 8 7 5 28 28 H 1.09002 * 109.47153 * 59.99773 * 9 8 7 29 29 H 1.09001 * 109.46832 * 299.99964 * 9 8 7 30 30 H 0.96995 * 120.00011 * 0.02562 * 12 10 9 31 31 H 1.09001 * 109.47487 * 300.00114 * 13 12 10 32 32 H 1.09002 * 109.47182 * 60.00342 * 13 12 10 33 33 H 1.09001 * 109.47289 * 299.99909 * 14 13 12 34 34 H 1.09002 * 109.47153 * 59.99993 * 14 13 12 35 35 H 0.96993 * 120.00405 * 179.97438 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2869 1.0427 0.0000 4 8 3.4540 0.7268 -0.0057 5 6 3.6037 -0.6054 -0.0038 6 17 5.1011 -1.4838 -0.0096 7 6 2.3530 -1.1315 0.0035 8 6 1.9580 -2.5858 0.0089 9 6 1.8306 -3.0744 1.4531 10 6 1.4349 -4.5285 1.4584 11 8 1.2714 -5.1163 0.4102 12 7 1.2639 -5.1761 2.6281 13 6 0.8797 -6.5898 2.6332 14 6 0.7523 -7.0784 4.0774 15 6 0.3578 -8.5328 4.0828 16 1 0.2121 -9.0562 3.1494 17 6 0.1818 -9.1950 5.2793 18 7 0.3588 -8.5575 6.4159 19 14 -0.3079 -10.9977 5.2859 20 1 0.7296 -11.7950 4.5837 21 1 -0.4315 -11.4719 6.6877 22 1 -1.6105 -11.1592 4.5915 23 1 -0.3633 0.0036 1.0277 24 1 -0.3633 0.8883 -0.5169 25 1 -0.3634 -0.8917 -0.5107 26 1 2.7193 -3.1710 -0.5069 27 1 1.0016 -2.7043 -0.5005 28 1 1.0694 -2.4892 1.9689 29 1 2.7871 -2.9559 1.9624 30 1 1.3950 -4.7061 3.4663 31 1 -0.0768 -6.7083 2.1242 32 1 1.6409 -7.1750 2.1171 33 1 1.7086 -6.9599 4.5868 34 1 -0.0090 -6.4931 4.5931 35 1 0.2346 -9.0232 7.2576 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000273135542.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:08:21 Heat of formation + Delta-G solvation = -3.506972 kcal Electronic energy + Delta-G solvation = -19364.725376 eV Core-core repulsion = 16005.493017 eV Total energy + Delta-G solvation = -3359.232359 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 286.087 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -45.38155 -39.38084 -37.55434 -36.15232 -34.90279 -33.37536 -32.86327 -31.00541 -29.56138 -29.05818 -25.93486 -24.24312 -21.91586 -21.64528 -20.94075 -19.99215 -18.19023 -18.01585 -16.88464 -16.32441 -15.95902 -15.28807 -15.13577 -14.52405 -14.27115 -13.76122 -13.69741 -13.49945 -13.12671 -12.95379 -12.79252 -12.63667 -12.46886 -12.27029 -12.06274 -11.45245 -11.24298 -11.06015 -11.02056 -10.68348 -10.35346 -10.28660 -9.86603 -9.61175 -9.44516 -9.19813 -8.57676 -8.38563 -6.11780 -4.14920 0.75234 0.86866 1.71670 2.94667 3.24976 3.29360 3.33398 3.36179 3.60608 3.75464 4.23119 4.39599 4.47373 4.71204 4.85051 5.06234 5.11288 5.17912 5.25203 5.29945 5.37384 5.48289 5.68058 5.80536 5.95905 6.30572 6.31352 6.70346 6.87546 7.48243 7.58381 7.72500 7.85974 7.96611 8.24703 8.59724 8.90916 9.50093 10.99756 Molecular weight = 286.09amu Principal moments of inertia in cm(-1) A = 0.029716 B = 0.002710 C = 0.002615 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 942.032404 B =10328.860891 C =10705.812211 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 C 0.034 3.966 3 N -0.349 5.349 4 O 0.109 5.891 5 C -0.002 4.002 6 Cl 0.051 6.949 7 C -0.162 4.162 8 C -0.029 4.029 9 C -0.137 4.137 10 C 0.506 3.494 11 O -0.551 6.551 12 N -0.722 5.722 13 C 0.121 3.879 14 C 0.013 3.987 15 C -0.523 4.523 16 H 0.059 0.941 17 C 0.059 3.941 18 N -0.894 5.894 19 Si 0.897 3.103 20 H -0.275 1.275 21 H -0.287 1.287 22 H -0.275 1.275 23 H 0.086 0.914 24 H 0.079 0.921 25 H 0.088 0.912 26 H 0.090 0.910 27 H 0.092 0.908 28 H 0.094 0.906 29 H 0.093 0.907 30 H 0.398 0.602 31 H 0.056 0.944 32 H 0.056 0.944 33 H 0.022 0.978 34 H 0.022 0.978 35 H 0.263 0.737 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.188 18.454 -11.298 22.251 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.137 4.137 2 C -0.124 4.124 3 N -0.055 5.055 4 O 0.041 5.959 5 C -0.092 4.092 6 Cl 0.079 6.921 7 C -0.167 4.167 8 C -0.067 4.067 9 C -0.178 4.178 10 C 0.291 3.709 11 O -0.430 6.430 12 N -0.372 5.372 13 C -0.001 4.001 14 C -0.025 4.025 15 C -0.562 4.562 16 H 0.077 0.923 17 C -0.142 4.142 18 N -0.533 5.533 19 Si 0.725 3.275 20 H -0.201 1.201 21 H -0.212 1.212 22 H -0.201 1.201 23 H 0.105 0.895 24 H 0.098 0.902 25 H 0.107 0.893 26 H 0.109 0.891 27 H 0.111 0.889 28 H 0.112 0.888 29 H 0.111 0.889 30 H 0.232 0.768 31 H 0.074 0.926 32 H 0.074 0.926 33 H 0.040 0.960 34 H 0.040 0.960 35 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges 4.977 19.214 -11.840 23.112 hybrid contribution 0.075 -1.559 0.642 1.688 sum 5.053 17.656 -11.197 21.509 Atomic orbital electron populations 1.20267 0.85058 1.04327 1.04045 1.23384 0.99244 0.87823 1.01966 1.73948 0.88558 1.23004 1.19989 1.84908 1.22104 1.20774 1.68079 1.24630 0.91177 0.84872 1.08478 1.98471 1.28105 1.68820 1.96680 1.20953 0.89761 0.98501 1.07474 1.19713 1.04179 0.86251 0.96601 1.21636 1.03951 0.94104 0.98071 1.20450 0.77572 0.88584 0.84262 1.90681 1.51810 1.68979 1.31559 1.46351 1.69197 1.13742 1.07883 1.21726 0.99090 0.77863 1.01449 1.19317 0.97750 0.96607 0.88805 1.21017 1.47385 0.95126 0.92663 0.92302 1.24996 0.95209 0.98533 0.95510 1.69941 1.49250 1.36767 0.97356 0.86571 0.79236 0.84739 0.76992 1.20098 1.21227 1.20090 0.89533 0.90181 0.89333 0.89137 0.88911 0.88802 0.88887 0.76842 0.92552 0.92555 0.95959 0.95957 0.92760 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.56 10.39 36.01 0.37 -0.18 16 2 C 0.03 0.34 7.32 -82.12 -0.60 -0.26 16 3 N -0.35 -3.96 12.07 33.43 0.40 -3.56 16 4 O 0.11 1.19 11.20 17.13 0.19 1.38 16 5 C 0.00 -0.02 8.12 29.82 0.24 0.23 16 6 Cl 0.05 0.45 29.23 -51.86 -1.52 -1.07 16 7 C -0.16 -1.60 5.58 -104.38 -0.58 -2.18 16 8 C -0.03 -0.30 4.90 -27.89 -0.14 -0.44 16 9 C -0.14 -1.44 5.68 -27.88 -0.16 -1.60 16 10 C 0.51 7.72 7.83 -10.98 -0.09 7.63 16 11 O -0.55 -10.42 15.98 5.56 0.09 -10.33 16 12 N -0.72 -11.78 5.56 -60.30 -0.33 -12.12 16 13 C 0.12 2.49 5.61 -4.04 -0.02 2.46 16 14 C 0.01 0.31 5.09 -27.89 -0.14 0.16 16 15 C -0.52 -14.32 9.11 -34.44 -0.31 -14.63 16 16 H 0.06 1.58 7.74 -52.48 -0.41 1.17 16 17 C 0.06 1.65 5.46 -17.82 -0.10 1.55 16 18 N -0.89 -25.85 13.29 55.43 0.74 -25.12 16 19 Si 0.90 21.14 29.54 -169.99 -5.02 16.12 16 20 H -0.28 -6.40 7.11 56.52 0.40 -6.00 16 21 H -0.29 -6.68 7.11 56.52 0.40 -6.27 16 22 H -0.28 -6.39 7.11 56.52 0.40 -5.99 16 23 H 0.09 0.53 8.14 -51.93 -0.42 0.10 16 24 H 0.08 0.50 8.14 -51.93 -0.42 0.08 16 25 H 0.09 0.54 7.65 -51.93 -0.40 0.14 16 26 H 0.09 0.99 8.10 -51.93 -0.42 0.57 16 27 H 0.09 0.94 7.61 -51.93 -0.39 0.54 16 28 H 0.09 0.82 8.14 -51.93 -0.42 0.40 16 29 H 0.09 0.87 8.14 -51.93 -0.42 0.45 16 30 H 0.40 5.57 8.47 -40.82 -0.35 5.22 16 31 H 0.06 1.20 8.14 -51.93 -0.42 0.78 16 32 H 0.06 1.21 8.14 -51.93 -0.42 0.79 16 33 H 0.02 0.56 8.14 -51.93 -0.42 0.14 16 34 H 0.02 0.56 8.14 -51.93 -0.42 0.14 16 35 H 0.26 7.20 8.31 -40.82 -0.34 6.86 16 LS Contribution 326.29 15.07 4.92 4.92 Total: -1.00 -31.39 326.29 -6.54 -37.93 By element: Atomic # 1 Polarization: 3.60 SS G_CDS: -4.48 Total: -0.88 kcal Atomic # 6 Polarization: -5.74 SS G_CDS: -1.52 Total: -7.27 kcal Atomic # 7 Polarization: -41.60 SS G_CDS: 0.80 Total: -40.79 kcal Atomic # 8 Polarization: -9.23 SS G_CDS: 0.28 Total: -8.95 kcal Atomic # 14 Polarization: 21.14 SS G_CDS: -5.02 Total: 16.12 kcal Atomic # 17 Polarization: 0.45 SS G_CDS: -1.52 Total: -1.07 kcal Total LS contribution 4.92 Total: 4.92 kcal Total: -31.39 -6.54 -37.93 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000273135542.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 34.420 kcal (2) G-P(sol) polarization free energy of solvation -31.386 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.033 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.540 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.927 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.507 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds