Wall clock time and date at job start Tue Mar 31 2020 06:26:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42898 * 113.99919 * 2 1 4 4 C 1.53001 * 109.46910 * 179.97438 * 3 2 1 5 5 N 1.46503 * 109.47422 * 51.46296 * 4 3 2 6 6 C 1.36873 * 120.00185 * 180.15748 * 5 4 3 7 7 H 1.07997 * 120.00008 * 59.39640 * 6 5 4 8 8 C 1.39006 * 119.99939 * 239.38781 * 6 5 4 9 9 N 1.31394 * 120.00060 * 42.26826 * 8 6 5 10 10 Si 1.86799 * 120.00146 * 222.26610 * 8 6 5 11 11 H 1.48504 * 109.47050 * 65.00266 * 10 8 6 12 12 H 1.48501 * 109.47244 * 185.00141 * 10 8 6 13 13 H 1.48500 * 109.46891 * 305.00175 * 10 8 6 14 14 C 1.34780 * 119.99510 * 0.15945 * 5 4 3 15 15 O 1.21739 * 119.99626 * 218.67589 * 14 5 4 16 16 C 1.46531 * 120.00276 * 38.67481 * 14 5 4 17 17 C 1.38027 * 126.23135 * 206.74588 * 16 14 5 18 18 C 1.39856 * 107.09725 * 179.97438 * 17 16 14 19 19 Cl 1.73592 * 126.06676 * 179.97438 * 18 17 16 20 20 C 1.35562 * 107.86397 * 359.77241 * 18 17 16 21 21 N 1.35682 * 108.85908 * 0.36920 * 20 18 17 22 22 C 1.46501 * 125.67792 * 179.89087 * 21 20 18 23 23 H 1.08997 * 109.47063 * 59.99997 * 1 2 3 24 24 H 1.09002 * 109.47478 * 180.02562 * 1 2 3 25 25 H 1.09007 * 109.47164 * 300.00540 * 1 2 3 26 26 H 1.08997 * 109.47472 * 59.99730 * 3 2 1 27 27 H 1.08998 * 109.46921 * 299.99490 * 3 2 1 28 28 H 1.09001 * 109.47367 * 291.46355 * 4 3 2 29 29 H 1.09005 * 109.46879 * 171.46056 * 4 3 2 30 30 H 0.97005 * 120.00575 * 184.97965 * 9 8 6 31 31 H 1.08001 * 126.45139 * 0.02562 * 17 16 14 32 32 H 1.07999 * 125.56724 * 180.22758 * 20 18 17 33 33 H 1.09000 * 109.47139 * 222.68022 * 22 21 20 34 34 H 1.08996 * 109.47320 * 102.67780 * 22 21 20 35 35 H 1.08996 * 109.47003 * 342.67546 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 3.5354 1.1846 0.0006 5 7 3.9548 0.2880 -1.0794 6 6 5.2838 0.0238 -1.2724 7 1 5.8657 -0.4249 -0.4809 8 6 5.8846 0.3329 -2.4872 9 7 5.6114 1.4708 -3.0846 10 14 7.0806 -0.8695 -3.2705 11 1 6.3600 -2.1142 -3.6404 12 1 7.6704 -0.2583 -4.4886 13 1 8.1619 -1.1917 -2.3050 14 6 3.0318 -0.2767 -1.8830 15 8 3.1698 -1.4282 -2.2532 16 6 1.8622 0.4954 -2.3111 17 6 0.6305 -0.0179 -2.6640 18 6 -0.1852 1.0666 -3.0022 19 17 -1.8395 0.9785 -3.5210 20 6 0.5438 2.1992 -2.8488 21 7 1.7916 1.8647 -2.4339 22 6 2.8806 2.8047 -2.1567 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3634 -1.0277 0.0005 25 1 -0.3634 0.5139 0.8900 26 1 1.6886 1.8464 0.8899 27 1 1.6886 1.8463 -0.8900 28 1 3.8676 0.7812 0.9572 29 1 3.9779 2.1690 -0.1520 30 1 5.9734 1.6555 -3.9654 31 1 0.3493 -1.0606 -2.6758 32 1 0.1900 3.2034 -3.0296 33 1 3.8110 2.4147 -2.5694 34 1 2.9859 2.9312 -1.0793 35 1 2.6550 3.7674 -2.6154 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000457179571.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:26:27 Heat of formation + Delta-G solvation = 51.763008 kcal Electronic energy + Delta-G solvation = -22585.411920 eV Core-core repulsion = 19228.576247 eV Total energy + Delta-G solvation = -3356.835673 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 286.087 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -41.94784 -38.13112 -36.85726 -36.12227 -34.90556 -32.78530 -31.87896 -29.00096 -28.69108 -26.61531 -25.21946 -24.79464 -22.84239 -21.13997 -20.12302 -18.74699 -17.37725 -17.20586 -16.62353 -15.80895 -15.01009 -14.80544 -14.25491 -13.96823 -13.89253 -13.72962 -13.60612 -13.08942 -12.75307 -12.52622 -12.18274 -12.13955 -11.74090 -11.46231 -11.33608 -11.19797 -11.04503 -10.83100 -10.59996 -10.51344 -10.45425 -10.20576 -8.95413 -8.76824 -8.60544 -7.93320 -7.59632 -7.36206 -6.47552 -4.17160 2.13021 2.47244 2.92537 3.22427 3.30444 3.43823 3.45527 4.12458 4.28663 4.32930 4.69376 4.96956 5.22730 5.32511 5.49020 5.55195 5.69141 5.73091 5.77860 5.82627 5.95965 6.03316 6.15031 6.31335 6.38676 6.42212 6.58772 6.67677 6.98533 7.30399 7.47676 7.54559 7.66803 8.21002 8.83036 9.02178 9.23467 9.95165 10.38673 Molecular weight = 286.09amu Principal moments of inertia in cm(-1) A = 0.022413 B = 0.006925 C = 0.006500 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1248.960944 B = 4042.590140 C = 4306.932834 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.366 6.366 3 C -0.027 4.027 4 C 0.107 3.893 5 N -0.477 5.477 6 C -0.336 4.336 7 H 0.074 0.926 8 C 0.079 3.921 9 N -0.833 5.833 10 Si 0.891 3.109 11 H -0.266 1.266 12 H -0.288 1.288 13 H -0.270 1.270 14 C 0.601 3.399 15 O -0.538 6.538 16 C 0.028 3.972 17 C -0.138 4.138 18 C -0.124 4.124 19 Cl -0.068 7.068 20 C -0.011 4.011 21 N -0.405 5.405 22 C 0.017 3.983 23 H 0.063 0.937 24 H 0.078 0.922 25 H 0.026 0.974 26 H 0.037 0.963 27 H 0.107 0.893 28 H 0.055 0.945 29 H 0.070 0.930 30 H 0.271 0.729 31 H 0.146 0.854 32 H 0.167 0.833 33 H 0.155 0.845 34 H 0.087 0.913 35 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.266 6.298 2.162 11.411 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.284 6.284 3 C -0.104 4.104 4 C -0.016 4.016 5 N -0.203 5.203 6 C -0.462 4.462 7 H 0.092 0.908 8 C -0.132 4.132 9 N -0.466 5.466 10 Si 0.716 3.284 11 H -0.191 1.191 12 H -0.214 1.214 13 H -0.194 1.194 14 C 0.390 3.610 15 O -0.416 6.416 16 C -0.085 4.085 17 C -0.163 4.163 18 C -0.158 4.158 19 Cl -0.040 7.040 20 C -0.145 4.145 21 N -0.083 5.083 22 C -0.122 4.122 23 H 0.081 0.919 24 H 0.096 0.904 25 H 0.044 0.956 26 H 0.056 0.944 27 H 0.123 0.877 28 H 0.073 0.927 29 H 0.088 0.912 30 H 0.082 0.918 31 H 0.164 0.836 32 H 0.185 0.815 33 H 0.173 0.827 34 H 0.105 0.895 35 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges -8.791 5.900 1.901 10.757 hybrid contribution 0.005 0.009 -0.367 0.367 sum -8.787 5.909 1.534 10.699 Atomic orbital electron populations 1.23013 0.82041 1.02398 1.00267 1.87999 1.19072 1.27003 1.94357 1.24621 0.95215 0.87116 1.03438 1.21936 0.90355 0.95719 0.93579 1.42595 1.04848 1.43211 1.29647 1.18612 0.83937 1.42092 1.01561 0.90842 1.25421 0.96434 0.93297 0.98026 1.69778 1.43844 1.17899 1.15117 0.86613 0.80253 0.83090 0.78479 1.19068 1.21354 1.19449 1.16704 0.79022 0.84898 0.80360 1.90650 1.75310 1.16113 1.59513 1.21179 0.98037 0.81424 1.07911 1.20901 0.91121 0.98414 1.05896 1.19783 0.86972 0.94600 1.14460 1.98276 1.17139 1.98610 1.89981 1.21497 0.85067 0.98745 1.09158 1.44458 1.10140 1.06720 1.46976 1.23577 0.92670 0.91863 1.04087 0.91920 0.90391 0.95561 0.94443 0.87677 0.92723 0.91199 0.91812 0.83648 0.81549 0.82733 0.89521 0.90994 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.31 9.55 101.05 0.97 1.27 16 2 O -0.37 -7.29 7.48 -35.23 -0.26 -7.55 16 3 C -0.03 -0.49 4.42 37.16 0.16 -0.32 16 4 C 0.11 2.15 5.45 -4.04 -0.02 2.13 16 5 N -0.48 -11.72 2.11 -116.34 -0.25 -11.96 16 6 C -0.34 -8.90 8.68 -15.02 -0.13 -9.03 16 7 H 0.07 1.97 8.06 -52.49 -0.42 1.55 16 8 C 0.08 2.03 5.02 -17.45 -0.09 1.94 16 9 N -0.83 -20.74 11.24 55.50 0.62 -20.12 16 10 Si 0.89 20.84 29.69 -169.99 -5.05 15.79 16 11 H -0.27 -6.67 7.11 56.52 0.40 -6.27 16 12 H -0.29 -6.51 7.11 56.52 0.40 -6.11 16 13 H -0.27 -6.10 7.11 56.52 0.40 -5.69 16 14 C 0.60 15.33 5.00 -12.92 -0.06 15.26 16 15 O -0.54 -15.74 17.35 5.15 0.09 -15.65 16 16 C 0.03 0.61 3.53 -81.99 -0.29 0.32 16 17 C -0.14 -2.67 7.60 -39.05 -0.30 -2.97 16 18 C -0.12 -2.04 5.02 -39.93 -0.20 -2.24 16 19 Cl -0.07 -0.96 29.30 -51.86 -1.52 -2.48 16 20 C -0.01 -0.17 10.92 -16.81 -0.18 -0.35 16 21 N -0.41 -7.29 1.63 -120.17 -0.20 -7.49 16 22 C 0.02 0.29 8.63 59.85 0.52 0.80 16 23 H 0.06 1.01 4.26 -51.93 -0.22 0.79 16 24 H 0.08 1.18 8.14 -51.93 -0.42 0.76 16 25 H 0.03 0.37 8.14 -51.93 -0.42 -0.05 16 26 H 0.04 0.59 8.14 -51.93 -0.42 0.16 16 27 H 0.11 1.85 2.02 -102.72 -0.21 1.64 16 28 H 0.05 1.09 8.14 -51.93 -0.42 0.67 16 29 H 0.07 1.31 6.04 -51.93 -0.31 1.00 16 30 H 0.27 6.48 8.32 -40.82 -0.34 6.14 16 31 H 0.15 2.83 8.06 -52.49 -0.42 2.40 16 32 H 0.17 2.01 8.06 -52.49 -0.42 1.59 16 33 H 0.16 3.22 4.92 -51.93 -0.26 2.96 16 34 H 0.09 1.37 3.89 -51.93 -0.20 1.17 16 35 H 0.07 0.97 8.09 -51.93 -0.42 0.55 16 LS Contribution 288.23 15.07 4.34 4.34 Total: -1.00 -29.52 288.23 -5.56 -35.08 By element: Atomic # 1 Polarization: 6.95 SS G_CDS: -3.71 Total: 3.24 kcal Atomic # 6 Polarization: 6.44 SS G_CDS: 0.37 Total: 6.81 kcal Atomic # 7 Polarization: -39.75 SS G_CDS: 0.18 Total: -39.57 kcal Atomic # 8 Polarization: -23.03 SS G_CDS: -0.17 Total: -23.20 kcal Atomic # 14 Polarization: 20.84 SS G_CDS: -5.05 Total: 15.79 kcal Atomic # 17 Polarization: -0.96 SS G_CDS: -1.52 Total: -2.48 kcal Total LS contribution 4.34 Total: 4.34 kcal Total: -29.52 -5.56 -35.08 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000457179571.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 86.839 kcal (2) G-P(sol) polarization free energy of solvation -29.517 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 57.321 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.558 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.076 kcal (6) G-S(sol) free energy of system = (1) + (5) 51.763 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds