Wall clock time and date at job start Tue Mar 31 2020 06:17:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17397 * 1 3 3 C 1.47202 * 179.97438 * 2 1 4 4 N 1.46497 * 109.46636 * 146.88602 * 3 2 1 5 5 C 1.36822 * 119.99681 * 263.35951 * 4 3 2 6 6 H 1.07994 * 120.00157 * 33.17906 * 5 4 3 7 7 C 1.39052 * 119.99839 * 213.17165 * 5 4 3 8 8 N 1.31365 * 120.00246 * 22.07690 * 7 5 4 9 9 Si 1.86797 * 119.99859 * 202.08071 * 7 5 4 10 10 H 1.48504 * 109.47282 * 90.00107 * 9 7 5 11 11 H 1.48504 * 109.47145 * 210.00069 * 9 7 5 12 12 H 1.48500 * 109.47212 * 329.99964 * 9 7 5 13 13 C 1.34780 * 120.00280 * 83.36984 * 4 3 2 14 14 O 1.21707 * 120.00070 * 182.42526 * 13 4 3 15 15 C 1.46833 * 119.99607 * 2.41792 * 13 4 3 16 16 C 1.36040 * 125.44780 * 166.62225 * 15 13 4 17 17 C 1.41479 * 107.73231 * 179.97438 * 16 15 13 18 18 C 1.40878 * 107.01553 * 0.02562 * 17 16 15 19 19 C 1.39140 * 119.53977 * 179.97438 * 18 17 16 20 20 C 1.37750 * 120.01097 * 0.02562 * 19 18 17 21 21 C 1.38843 * 120.68623 * 359.95699 * 20 19 18 22 22 C 1.37724 * 120.44151 * 0.29900 * 21 20 19 23 23 F 1.35102 * 120.17433 * 179.69665 * 22 21 20 24 24 N 1.37567 * 107.38649 * 0.02562 * 18 17 16 25 25 H 0.97002 * 125.61406 * 179.97438 * 24 18 17 26 26 H 4.40633 * 5.51576 * 180.02562 * 4 1 2 27 27 H 1.09000 * 109.47184 * 26.88238 * 3 2 1 28 28 H 1.08998 * 109.46854 * 266.88258 * 3 2 1 29 29 H 0.97003 * 120.00571 * 184.98119 * 8 7 5 30 30 H 1.08002 * 126.12932 * 359.97438 * 16 15 13 31 31 H 1.08001 * 119.99566 * 180.02562 * 19 18 17 32 32 H 1.08001 * 119.65330 * 179.97438 * 20 19 18 33 33 H 1.08003 * 119.77707 * 180.02562 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1337 1.1578 -0.7546 5 6 3.4909 1.0169 -2.0678 6 1 2.9696 0.3102 -2.6964 7 6 4.5251 1.7837 -2.5931 8 7 5.4290 2.3032 -1.7939 9 14 4.6289 2.0753 -4.4353 10 1 3.8726 3.3043 -4.7854 11 1 6.0508 2.2395 -4.8311 12 1 4.0461 0.9138 -5.1539 13 6 3.2307 2.3610 -0.1552 14 8 3.5937 3.3315 -0.7937 15 6 2.8981 2.5011 1.2682 16 6 3.1937 3.5779 2.0452 17 6 2.7037 3.3176 3.3467 18 6 2.1051 2.0428 3.3145 19 6 1.5331 1.5241 4.4720 20 6 1.5541 2.2562 5.6386 21 6 2.1430 3.5129 5.6760 22 6 2.7115 4.0511 4.5429 23 9 3.2777 5.2771 4.5838 24 7 2.2356 1.5595 2.0331 25 1 1.9150 0.6999 1.7181 26 1 -1.0502 -0.0001 0.0003 27 1 3.0097 -0.9158 -0.4647 28 1 3.0092 0.0567 1.0261 29 1 6.1082 2.8969 -2.1506 30 1 3.7098 4.4713 1.7258 31 1 1.0725 0.5473 4.4557 32 1 1.1080 1.8482 6.5336 33 1 2.1516 4.0741 6.5988 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000491014708.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:17:34 Heat of formation + Delta-G solvation = 79.300040 kcal Electronic energy + Delta-G solvation = -21876.589812 eV Core-core repulsion = 18399.920779 eV Total energy + Delta-G solvation = -3476.669033 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 286.086 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -48.56758 -41.24764 -38.46595 -36.28499 -35.23503 -32.88334 -31.54289 -31.51237 -29.35689 -28.37529 -26.85575 -25.20239 -22.92952 -22.03962 -20.84939 -19.77857 -18.28218 -17.89921 -17.41756 -16.29857 -15.72643 -15.46423 -15.35037 -15.29795 -14.86031 -14.42752 -14.03751 -13.78311 -13.64948 -13.21845 -12.69746 -12.58064 -12.43145 -12.19151 -11.51976 -11.37175 -11.25182 -11.17604 -11.02218 -10.72415 -10.49348 -10.21043 -10.01778 -9.44369 -9.19184 -8.50647 -8.06057 -7.41369 -7.34810 -6.28960 -4.02666 1.03410 1.66191 2.70227 2.85325 2.91683 3.26189 3.32887 3.35494 3.40896 3.90049 4.15893 4.38346 4.49192 4.63321 4.80223 4.92584 5.07193 5.12755 5.28288 5.45586 5.47171 5.54959 5.80582 5.91764 5.94302 6.10858 6.20406 6.27614 6.44762 6.52347 6.89683 6.97268 7.27253 7.40651 7.68633 7.75122 7.98579 8.71533 8.89403 9.35240 9.97492 10.75658 Molecular weight = 286.09amu Principal moments of inertia in cm(-1) A = 0.022198 B = 0.005397 C = 0.004518 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1261.071455 B = 5187.283434 C = 6196.536408 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.194 4.194 2 C -0.207 4.207 3 C 0.184 3.816 4 N -0.434 5.434 5 C -0.344 4.344 6 H 0.089 0.911 7 C 0.062 3.938 8 N -0.800 5.800 9 Si 0.915 3.085 10 H -0.276 1.276 11 H -0.285 1.285 12 H -0.272 1.272 13 C 0.508 3.492 14 O -0.499 6.499 15 C 0.078 3.922 16 C -0.149 4.149 17 C -0.136 4.136 18 C 0.112 3.888 19 C -0.137 4.137 20 C -0.084 4.084 21 C -0.189 4.189 22 C 0.142 3.858 23 F -0.139 7.139 24 N -0.583 5.583 25 H 0.424 0.576 26 H 0.217 0.783 27 H 0.108 0.892 28 H 0.085 0.915 29 H 0.270 0.730 30 H 0.152 0.848 31 H 0.122 0.878 32 H 0.130 0.870 33 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.398 -4.239 11.465 14.288 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.213 4.213 2 C -0.209 4.209 3 C 0.059 3.941 4 N -0.154 5.154 5 C -0.470 4.470 6 H 0.107 0.893 7 C -0.151 4.151 8 N -0.434 5.434 9 Si 0.742 3.258 10 H -0.202 1.202 11 H -0.211 1.211 12 H -0.197 1.197 13 C 0.296 3.704 14 O -0.374 6.374 15 C -0.033 4.033 16 C -0.174 4.174 17 C -0.142 4.142 18 C 0.001 3.999 19 C -0.158 4.158 20 C -0.104 4.104 21 C -0.209 4.209 22 C 0.122 3.878 23 F -0.117 7.117 24 N -0.197 5.197 25 H 0.273 0.727 26 H 0.233 0.767 27 H 0.126 0.874 28 H 0.103 0.897 29 H 0.081 0.919 30 H 0.169 0.831 31 H 0.140 0.860 32 H 0.148 0.852 33 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -6.956 -3.765 10.966 13.521 hybrid contribution -0.187 -0.030 -0.867 0.887 sum -7.143 -3.795 10.099 12.939 Atomic orbital electron populations 1.24908 0.95822 1.00427 1.00101 1.24133 0.95476 1.00501 1.00761 1.18981 0.82956 0.94325 0.97801 1.43263 1.57258 1.03895 1.10995 1.19204 1.15793 1.28071 0.83920 0.89282 1.25117 0.93147 0.97394 0.99446 1.69939 1.11067 1.25503 1.36878 0.86142 0.77288 0.79029 0.83375 1.20199 1.21079 1.19727 1.16647 0.86125 0.84177 0.83475 1.90701 1.46731 1.37065 1.62941 1.21229 0.98831 0.89828 0.93430 1.20642 1.06459 1.00015 0.90298 1.18148 1.06310 0.95607 0.94121 1.18189 1.01174 0.93896 0.86671 1.20019 1.04231 1.00943 0.90567 1.20481 0.99282 0.93540 0.97059 1.20697 1.04936 0.98041 0.97207 1.17189 0.96964 0.80472 0.93212 1.91461 1.82641 1.40574 1.97071 1.43690 1.49911 1.18788 1.07359 0.72660 0.76653 0.87359 0.89741 0.91932 0.83076 0.85960 0.85164 0.85207 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.19 -2.81 19.25 29.55 0.57 -2.24 16 2 C -0.21 -3.49 11.25 -37.12 -0.42 -3.91 16 3 C 0.18 3.41 5.46 -6.83 -0.04 3.37 16 4 N -0.43 -10.55 2.55 -119.38 -0.30 -10.85 16 5 C -0.34 -9.04 9.34 -15.02 -0.14 -9.18 16 6 H 0.09 2.22 7.92 -52.49 -0.42 1.80 16 7 C 0.06 1.68 4.29 -17.45 -0.07 1.60 16 8 N -0.80 -23.03 11.02 55.50 0.61 -22.42 16 9 Si 0.92 21.12 29.61 -169.99 -5.03 16.09 16 10 H -0.28 -6.59 7.11 56.52 0.40 -6.19 16 11 H -0.28 -6.47 7.11 56.52 0.40 -6.07 16 12 H -0.27 -5.96 7.11 56.52 0.40 -5.56 16 13 C 0.51 13.14 6.85 -12.78 -0.09 13.05 16 14 O -0.50 -14.82 13.81 5.18 0.07 -14.74 16 15 C 0.08 1.70 6.53 -82.30 -0.54 1.16 16 16 C -0.15 -3.15 10.56 -39.14 -0.41 -3.56 16 17 C -0.14 -2.52 6.14 -106.88 -0.66 -3.17 16 18 C 0.11 1.87 7.25 -83.96 -0.61 1.26 16 19 C -0.14 -1.79 10.06 -39.42 -0.40 -2.19 16 20 C -0.08 -0.98 10.01 -39.54 -0.40 -1.37 16 21 C -0.19 -2.47 10.00 -39.55 -0.40 -2.87 16 22 C 0.14 2.33 7.35 -38.99 -0.29 2.04 16 23 F -0.14 -2.35 17.28 2.25 0.04 -2.31 16 24 N -0.58 -10.48 4.85 -7.36 -0.04 -10.52 16 25 H 0.42 6.83 3.55 -40.82 -0.15 6.69 16 26 H 0.22 2.23 7.80 -54.08 -0.42 1.81 16 27 H 0.11 1.84 7.99 -51.93 -0.41 1.42 16 28 H 0.09 1.44 5.16 -51.93 -0.27 1.17 16 29 H 0.27 7.47 8.32 -40.82 -0.34 7.13 16 30 H 0.15 3.25 8.06 -52.49 -0.42 2.83 16 31 H 0.12 1.26 8.06 -52.49 -0.42 0.84 16 32 H 0.13 1.06 8.06 -52.49 -0.42 0.64 16 33 H 0.13 1.37 8.06 -52.48 -0.42 0.94 16 LS Contribution 297.77 15.07 4.49 4.49 Total: -1.00 -32.26 297.77 -6.54 -38.80 By element: Atomic # 1 Polarization: 9.95 SS G_CDS: -2.49 Total: 7.46 kcal Atomic # 6 Polarization: -2.11 SS G_CDS: -3.88 Total: -5.99 kcal Atomic # 7 Polarization: -44.06 SS G_CDS: 0.27 Total: -43.79 kcal Atomic # 8 Polarization: -14.82 SS G_CDS: 0.07 Total: -14.74 kcal Atomic # 9 Polarization: -2.35 SS G_CDS: 0.04 Total: -2.31 kcal Atomic # 14 Polarization: 21.12 SS G_CDS: -5.03 Total: 16.09 kcal Total LS contribution 4.49 Total: 4.49 kcal Total: -32.26 -6.54 -38.80 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000491014708.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 118.097 kcal (2) G-P(sol) polarization free energy of solvation -32.261 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 85.836 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.536 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.797 kcal (6) G-S(sol) free energy of system = (1) + (5) 79.300 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds