Wall clock time and date at job start Tue Mar 31 2020 06:15:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 N 1.28432 * 125.19271 * 2 1 4 4 C 1.30850 * 111.00041 * 179.72912 * 3 2 1 5 5 C 1.39783 * 107.89418 * 0.45336 * 4 3 2 6 6 Cl 1.73599 * 127.34405 * 179.83126 * 5 4 3 7 7 C 1.36796 * 125.19348 * 180.02562 * 2 1 3 8 8 C 1.46870 * 126.91432 * 0.02642 * 7 2 1 9 9 O 1.21564 * 120.00287 * 179.97438 * 8 7 2 10 10 O 1.34839 * 119.99958 * 359.97227 * 8 7 2 11 11 C 1.45196 * 117.00260 * 180.02562 * 10 8 7 12 12 C 1.52998 * 109.47439 * 180.02562 * 11 10 8 13 13 C 1.52999 * 109.46944 * 300.00234 * 12 11 10 14 14 C 1.53004 * 109.46787 * 60.00196 * 12 11 10 15 15 C 1.50695 * 109.47285 * 179.97438 * 12 11 10 16 16 H 1.08005 * 119.99818 * 0.02562 * 15 12 11 17 17 C 1.37880 * 120.00040 * 179.97438 * 15 12 11 18 18 N 1.31512 * 120.00112 * 0.02562 * 17 15 12 19 19 Si 1.86799 * 119.99900 * 180.02562 * 17 15 12 20 20 H 1.48495 * 109.47563 * 89.99921 * 19 17 15 21 21 H 1.48504 * 109.46828 * 210.00155 * 19 17 15 22 22 H 1.48505 * 109.47334 * 329.99975 * 19 17 15 23 23 H 1.08996 * 109.47373 * 269.98629 * 1 2 3 24 24 H 1.08998 * 109.46735 * 29.98126 * 1 2 3 25 25 H 1.08998 * 109.47032 * 149.98151 * 1 2 3 26 26 H 1.07994 * 126.05614 * 180.30480 * 4 3 2 27 27 H 1.09007 * 109.47163 * 300.00137 * 11 10 8 28 28 H 1.09003 * 109.47003 * 59.99576 * 11 10 8 29 29 H 1.09000 * 109.47263 * 59.99842 * 13 12 11 30 30 H 1.09001 * 109.46963 * 179.97438 * 13 12 11 31 31 H 1.08999 * 109.46970 * 299.99285 * 13 12 11 32 32 H 1.08992 * 109.47588 * 59.99832 * 14 12 11 33 33 H 1.09001 * 109.46570 * 180.02562 * 14 12 11 34 34 H 1.09000 * 109.46665 * 299.99697 * 14 12 11 35 35 H 0.96997 * 120.00453 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.2052 1.0496 0.0000 4 6 3.4737 0.7288 0.0058 5 6 3.5640 -0.6661 -0.0006 6 17 5.0093 -1.6278 -0.0010 7 6 2.2534 -1.1179 -0.0005 8 6 1.8022 -2.5156 -0.0017 9 8 2.6173 -3.4175 -0.0025 10 8 0.4838 -2.7984 -0.0018 11 6 0.1106 -4.2016 -0.0024 12 6 -1.4145 -4.3237 -0.0031 13 6 -1.9810 -3.6458 1.2461 14 6 -1.9799 -3.6451 -1.2525 15 6 -1.8019 -5.7800 -0.0044 16 1 -1.0367 -6.5423 -0.0042 17 6 -3.1330 -6.1394 -0.0046 18 7 -4.0647 -5.2112 -0.0043 19 14 -3.6131 -7.9446 -0.0055 20 1 -3.7404 -8.4237 1.3943 21 1 -4.9120 -8.1110 -0.7058 22 1 -2.5685 -8.7344 -0.7058 23 1 -0.3634 -0.0002 1.0276 24 1 -0.3633 0.8902 -0.5135 25 1 -0.3633 -0.8898 -0.5141 26 1 4.3040 1.4193 0.0117 27 1 0.5138 -4.6844 -0.8926 28 1 0.5138 -4.6852 0.8874 29 1 -1.7008 -2.5924 1.2465 30 1 -3.0676 -3.7324 1.2453 31 1 -1.5783 -4.1293 2.1361 32 1 -1.5763 -4.1279 -2.1424 33 1 -3.0664 -3.7317 -1.2527 34 1 -1.6997 -2.5917 -1.2519 35 1 -5.0011 -5.4639 -0.0041 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000850950057.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:15:21 Heat of formation + Delta-G solvation = -16.668513 kcal Electronic energy + Delta-G solvation = -20830.798130 eV Core-core repulsion = 17470.995043 eV Total energy + Delta-G solvation = -3359.803087 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 286.087 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -42.75792 -39.81700 -36.84392 -36.51735 -35.00858 -33.44399 -31.47291 -30.96011 -27.27157 -26.16324 -25.75468 -25.26528 -23.42385 -21.84757 -20.38981 -18.98263 -18.19261 -16.71102 -16.50331 -15.98823 -15.71854 -15.57286 -14.87007 -14.56664 -14.13620 -13.34286 -13.26276 -13.02981 -12.99969 -12.65964 -12.05240 -11.92151 -11.71111 -11.61143 -11.29270 -11.05385 -10.78244 -10.62687 -10.54404 -10.41487 -10.22632 -10.05468 -9.56434 -9.48116 -9.45251 -8.91444 -8.87711 -8.46024 -6.10718 -4.22207 0.88198 1.75331 2.24016 2.55017 2.87632 2.95887 3.23230 3.30566 3.34519 4.31107 4.36950 4.54405 4.88401 5.12574 5.16487 5.22215 5.28820 5.61248 5.90752 5.95018 5.98270 6.31992 6.39050 6.58558 6.82548 6.84699 6.97151 6.99147 7.27099 7.49666 7.61579 7.65767 7.93677 7.95969 8.07255 8.28436 8.77431 9.43980 10.90612 Molecular weight = 286.09amu Principal moments of inertia in cm(-1) A = 0.029581 B = 0.004239 C = 0.003807 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 946.329187 B = 6603.287624 C = 7353.252268 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.079 3.921 2 N -0.251 5.251 3 N -0.259 5.259 4 C 0.010 3.990 5 C -0.089 4.089 6 Cl -0.007 7.007 7 C -0.004 4.004 8 C 0.526 3.474 9 O -0.482 6.482 10 O -0.348 6.348 11 C 0.085 3.915 12 C 0.071 3.929 13 C -0.130 4.130 14 C -0.129 4.129 15 C -0.513 4.513 16 H 0.058 0.942 17 C 0.070 3.930 18 N -0.882 5.882 19 Si 0.896 3.104 20 H -0.280 1.280 21 H -0.286 1.286 22 H -0.274 1.274 23 H 0.093 0.907 24 H 0.100 0.900 25 H 0.119 0.881 26 H 0.197 0.803 27 H 0.061 0.939 28 H 0.061 0.939 29 H 0.014 0.986 30 H 0.085 0.915 31 H 0.024 0.976 32 H 0.024 0.976 33 H 0.086 0.914 34 H 0.013 0.987 35 H 0.261 0.739 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.760 11.423 -0.059 15.025 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 N -0.041 5.041 3 N -0.093 5.093 4 C -0.165 4.165 5 C -0.127 4.127 6 Cl 0.022 6.978 7 C -0.131 4.131 8 C 0.368 3.632 9 O -0.368 6.368 10 O -0.264 6.264 11 C 0.013 3.987 12 C 0.070 3.930 13 C -0.187 4.187 14 C -0.187 4.187 15 C -0.551 4.551 16 H 0.076 0.924 17 C -0.132 4.132 18 N -0.520 5.520 19 Si 0.723 3.277 20 H -0.206 1.206 21 H -0.211 1.211 22 H -0.199 1.199 23 H 0.112 0.888 24 H 0.118 0.882 25 H 0.137 0.863 26 H 0.214 0.786 27 H 0.079 0.921 28 H 0.079 0.921 29 H 0.033 0.967 30 H 0.104 0.896 31 H 0.043 0.957 32 H 0.044 0.956 33 H 0.104 0.896 34 H 0.032 0.968 35 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges 8.978 11.906 -0.068 14.912 hybrid contribution 0.454 -1.856 0.044 1.912 sum 9.432 10.049 -0.025 13.782 Atomic orbital electron populations 1.22624 0.70847 1.06778 1.05747 1.45751 1.08401 1.01572 1.48390 1.73259 1.03294 1.13788 1.19000 1.23519 0.94029 0.92439 1.06548 1.21303 0.87590 0.92560 1.11244 1.98368 1.32190 1.70378 1.96862 1.20507 0.90365 0.87422 1.14790 1.19488 0.82700 0.86498 0.74563 1.90911 1.54984 1.46045 1.44842 1.86571 1.22713 1.34329 1.82822 1.23820 0.99744 0.74049 1.01124 1.18269 0.84866 0.96085 0.93744 1.21786 1.04461 0.95544 0.96935 1.21793 1.04508 0.95415 0.96977 1.20907 0.92151 0.90179 1.51864 0.92410 1.24840 0.96296 0.97561 0.94536 1.69805 1.00284 1.31998 1.49926 0.86530 0.77967 0.84950 0.78203 1.20603 1.21125 1.19856 0.88805 0.88173 0.86264 0.78601 0.92082 0.92073 0.96698 0.89613 0.95689 0.95644 0.89577 0.96810 0.92832 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 0.87 10.81 59.85 0.65 1.52 16 2 N -0.25 -3.40 3.75 -63.87 -0.24 -3.64 16 3 N -0.26 -3.36 11.89 30.61 0.36 -2.99 16 4 C 0.01 0.12 12.03 -17.39 -0.21 -0.09 16 5 C -0.09 -1.24 6.88 -38.86 -0.27 -1.51 16 6 Cl -0.01 -0.09 28.13 -51.86 -1.46 -1.55 16 7 C 0.00 -0.05 6.96 -82.02 -0.57 -0.63 16 8 C 0.53 9.36 7.93 34.22 0.27 9.63 16 9 O -0.48 -9.54 15.63 -19.31 -0.30 -9.84 16 10 O -0.35 -6.34 6.35 -40.87 -0.26 -6.60 16 11 C 0.08 1.75 4.27 37.16 0.16 1.91 16 12 C 0.07 1.61 0.58 -155.66 -0.09 1.52 16 13 C -0.13 -2.87 8.11 37.16 0.30 -2.57 16 14 C -0.13 -2.86 8.11 37.16 0.30 -2.55 16 15 C -0.51 -13.06 8.01 -34.44 -0.28 -13.34 16 16 H 0.06 1.48 7.74 -52.48 -0.41 1.07 16 17 C 0.07 1.78 5.15 -17.82 -0.09 1.69 16 18 N -0.88 -22.86 9.35 55.43 0.52 -22.34 16 19 Si 0.90 20.19 29.54 -169.99 -5.02 15.17 16 20 H -0.28 -6.32 7.11 56.52 0.40 -5.91 16 21 H -0.29 -6.41 7.11 56.52 0.40 -6.01 16 22 H -0.27 -6.17 7.11 56.52 0.40 -5.77 16 23 H 0.09 0.94 8.14 -51.93 -0.42 0.52 16 24 H 0.10 0.86 8.14 -51.93 -0.42 0.44 16 25 H 0.12 1.49 5.72 -51.93 -0.30 1.19 16 26 H 0.20 1.54 8.06 -52.49 -0.42 1.12 16 27 H 0.06 1.28 8.14 -51.92 -0.42 0.86 16 28 H 0.06 1.28 8.14 -51.93 -0.42 0.86 16 29 H 0.01 0.28 7.68 -51.93 -0.40 -0.12 16 30 H 0.09 2.09 6.07 -51.93 -0.32 1.77 16 31 H 0.02 0.54 8.14 -51.93 -0.42 0.12 16 32 H 0.02 0.55 8.14 -51.93 -0.42 0.12 16 33 H 0.09 2.09 6.07 -51.93 -0.32 1.78 16 34 H 0.01 0.26 7.25 -51.93 -0.38 -0.12 16 35 H 0.26 6.54 8.31 -40.82 -0.34 6.20 16 LS Contribution 310.55 15.07 4.68 4.68 Total: -1.00 -27.68 310.55 -5.75 -33.42 By element: Atomic # 1 Polarization: 2.31 SS G_CDS: -4.20 Total: -1.89 kcal Atomic # 6 Polarization: -4.59 SS G_CDS: 0.17 Total: -4.41 kcal Atomic # 7 Polarization: -29.62 SS G_CDS: 0.64 Total: -28.98 kcal Atomic # 8 Polarization: -15.88 SS G_CDS: -0.56 Total: -16.44 kcal Atomic # 14 Polarization: 20.19 SS G_CDS: -5.02 Total: 15.17 kcal Atomic # 17 Polarization: -0.09 SS G_CDS: -1.46 Total: -1.55 kcal Total LS contribution 4.68 Total: 4.68 kcal Total: -27.68 -5.75 -33.42 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000850950057.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.756 kcal (2) G-P(sol) polarization free energy of solvation -27.677 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.921 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.747 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.424 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.669 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds