Wall clock time and date at job start Tue Mar 31 2020 06:41:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50708 * 1 3 3 N 1.30852 * 125.77844 * 2 1 4 4 N 1.40076 * 108.40984 * 179.81354 * 3 2 1 5 5 C 1.46503 * 126.09432 * 180.25382 * 4 3 2 6 6 C 1.35858 * 107.81727 * 0.36565 * 4 3 2 7 7 N 1.39579 * 126.26545 * 179.90052 * 6 4 3 8 8 C 1.34774 * 120.00218 * 330.74360 * 7 6 4 9 9 O 1.21600 * 119.99966 * 353.75642 * 8 7 6 10 10 N 1.34781 * 120.00295 * 173.75742 * 8 7 6 11 11 C 1.46498 * 119.99723 * 179.97438 * 10 8 7 12 12 H 1.08994 * 109.47680 * 35.00401 * 11 10 8 13 13 C 1.52996 * 109.47576 * 274.99714 * 11 10 8 14 14 C 1.50703 * 109.46771 * 155.00168 * 11 10 8 15 15 H 1.08006 * 120.00226 * 0.02562 * 14 11 10 16 16 C 1.37874 * 120.00194 * 180.02562 * 14 11 10 17 17 N 1.31513 * 120.00001 * 359.97438 * 16 14 11 18 18 Si 1.86805 * 120.00244 * 180.02562 * 16 14 11 19 19 H 1.48498 * 109.47033 * 359.97438 * 18 16 14 20 20 H 1.48504 * 109.47021 * 119.99744 * 18 16 14 21 21 H 1.48497 * 109.47255 * 239.99877 * 18 16 14 22 22 C 1.36149 * 107.47269 * 359.64122 * 6 4 3 23 23 Cl 1.73598 * 126.07398 * 180.24398 * 22 6 4 24 24 H 1.08995 * 109.46844 * 269.95643 * 1 2 3 25 25 H 1.09001 * 109.46847 * 29.95369 * 1 2 3 26 26 H 1.08995 * 109.47207 * 149.95092 * 1 2 3 27 27 H 1.09001 * 109.46770 * 271.92244 * 5 4 3 28 28 H 1.08999 * 109.46869 * 31.92159 * 5 4 3 29 29 H 1.08998 * 109.47453 * 151.92380 * 5 4 3 30 30 H 0.96999 * 120.00205 * 150.73517 * 7 6 4 31 31 H 0.97002 * 119.99824 * 0.02562 * 10 8 7 32 32 H 1.08994 * 109.47177 * 300.00996 * 13 11 10 33 33 H 1.08992 * 109.47357 * 180.02562 * 13 11 10 34 34 H 1.09014 * 109.46543 * 60.00568 * 13 11 10 35 35 H 0.97003 * 120.00171 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 7 2.2721 1.0616 0.0000 4 7 3.6090 0.6434 0.0043 5 6 4.7861 1.5156 0.0110 6 6 3.6197 -0.7151 -0.0013 7 7 4.7515 -1.5319 -0.0015 8 6 5.8955 -1.0982 -0.5669 9 8 5.9119 -0.0456 -1.1756 10 7 7.0213 -1.8311 -0.4578 11 6 8.2646 -1.3598 -1.0729 12 1 8.3112 -0.2726 -1.0112 13 6 8.3022 -1.7894 -2.5408 14 6 9.4422 -1.9551 -0.3450 15 1 9.2807 -2.6185 0.4918 16 6 10.7259 -1.6529 -0.7472 17 7 10.9226 -0.8455 -1.7665 18 14 12.1856 -2.3914 0.1546 19 1 11.6989 -3.2606 1.2559 20 1 12.9958 -3.1987 -0.7926 21 1 13.0225 -1.3016 0.7177 22 6 2.3242 -1.1341 -0.0008 23 17 1.7834 -2.7837 -0.0008 24 1 -0.3633 -0.0008 1.0276 25 1 -0.3633 0.8904 -0.5131 26 1 -0.3633 -0.8895 -0.5146 27 1 5.0615 1.7620 -1.0144 28 1 4.5565 2.4315 0.5556 29 1 5.6159 1.0023 0.4968 30 1 4.7148 -2.4116 0.4053 31 1 7.0081 -2.6709 0.0274 32 1 8.2556 -2.8766 -2.6025 33 1 9.2274 -1.4391 -2.9983 34 1 7.4504 -1.3587 -3.0674 35 1 11.8258 -0.6325 -2.0493 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000888644850.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:41:23 Heat of formation + Delta-G solvation = 49.298145 kcal Electronic energy + Delta-G solvation = -20554.854140 eV Core-core repulsion = 17230.204334 eV Total energy + Delta-G solvation = -3324.649807 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 286.094 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -41.54813 -39.48128 -36.38812 -35.48346 -34.55979 -33.51572 -32.42065 -29.84169 -29.28724 -28.13969 -25.37150 -25.28038 -22.68575 -20.88601 -20.40270 -19.49499 -18.26583 -17.60856 -16.29434 -15.87932 -15.68253 -15.20896 -14.98317 -14.32225 -13.97302 -13.59918 -13.31652 -13.17865 -12.63910 -12.58660 -12.40376 -12.18450 -11.88655 -11.47571 -11.36681 -11.16859 -11.13381 -10.90819 -10.65998 -10.40222 -10.34458 -10.23325 -9.65860 -9.17030 -8.76395 -8.67223 -8.19042 -7.92861 -6.23699 -4.33561 1.75982 1.98796 2.49886 2.59234 3.06243 3.17128 3.25745 3.27990 3.55200 4.22572 4.49868 4.73518 4.89541 5.09518 5.29797 5.37061 5.52905 5.63330 5.67998 5.84988 6.03604 6.09903 6.47922 6.60013 6.83924 6.84175 7.01602 7.10773 7.24402 7.47813 7.58930 7.72571 7.83194 8.01878 8.50627 8.65749 8.93860 9.34377 10.82255 Molecular weight = 286.09amu Principal moments of inertia in cm(-1) A = 0.031067 B = 0.003884 C = 0.003655 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 901.073053 B = 7208.144565 C = 7659.456934 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.072 4.072 2 C 0.102 3.898 3 N -0.286 5.286 4 N -0.354 5.354 5 C 0.126 3.874 6 C 0.372 3.628 7 N -0.668 5.668 8 C 0.687 3.313 9 O -0.578 6.578 10 N -0.709 5.709 11 C 0.280 3.720 12 H 0.051 0.949 13 C -0.149 4.149 14 C -0.536 4.536 15 H 0.063 0.937 16 C 0.068 3.932 17 N -0.882 5.882 18 Si 0.903 3.097 19 H -0.273 1.273 20 H -0.282 1.282 21 H -0.282 1.282 22 C -0.229 4.229 23 Cl -0.047 7.047 24 H 0.079 0.921 25 H 0.076 0.924 26 H 0.079 0.921 27 H 0.096 0.904 28 H 0.069 0.931 29 H 0.088 0.912 30 H 0.418 0.582 31 H 0.389 0.611 32 H 0.027 0.973 33 H 0.092 0.908 34 H 0.016 0.984 35 H 0.265 0.735 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -15.705 -1.731 4.792 16.511 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.130 4.130 2 C -0.065 4.065 3 N -0.110 5.110 4 N -0.139 5.139 5 C -0.014 4.014 6 C 0.145 3.855 7 N -0.322 5.322 8 C 0.387 3.613 9 O -0.456 6.456 10 N -0.360 5.360 11 C 0.179 3.821 12 H 0.069 0.931 13 C -0.208 4.208 14 C -0.575 4.575 15 H 0.081 0.919 16 C -0.136 4.136 17 N -0.519 5.519 18 Si 0.731 3.269 19 H -0.197 1.197 20 H -0.208 1.208 21 H -0.208 1.208 22 C -0.271 4.271 23 Cl -0.019 7.019 24 H 0.097 0.903 25 H 0.095 0.905 26 H 0.098 0.902 27 H 0.114 0.886 28 H 0.088 0.912 29 H 0.107 0.893 30 H 0.256 0.744 31 H 0.222 0.778 32 H 0.046 0.954 33 H 0.111 0.889 34 H 0.035 0.965 35 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges -15.213 0.542 4.105 15.767 hybrid contribution 0.998 -2.333 0.802 2.661 sum -14.215 -1.790 4.907 15.144 Atomic orbital electron populations 1.20197 0.86076 1.03580 1.03187 1.21896 0.97074 0.88485 0.99029 1.77478 0.85297 1.20990 1.27216 1.48500 1.06210 1.02454 1.56700 1.22184 0.82127 0.92187 1.04899 1.17152 0.86584 0.83173 0.98547 1.42324 1.08522 1.19479 1.61875 1.16234 0.80006 0.84529 0.80506 1.90974 1.84482 1.23204 1.46926 1.45941 1.08916 1.24248 1.56899 1.18771 0.77231 0.96396 0.89705 0.93107 1.22113 1.01528 0.98604 0.98537 1.21213 0.90237 1.30148 1.15899 0.91914 1.24873 0.98918 0.94823 0.94976 1.69903 1.21901 1.34527 1.25546 0.86364 0.82054 0.78962 0.79549 1.19712 1.20792 1.20814 1.19687 0.90420 0.87118 1.29896 1.98285 1.89626 1.15872 1.98135 0.90254 0.90540 0.90194 0.88568 0.91222 0.89308 0.74359 0.77795 0.95357 0.88949 0.96535 0.92478 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -0.69 10.30 36.01 0.37 -0.32 16 2 C 0.10 1.42 7.20 -82.43 -0.59 0.83 16 3 N -0.29 -4.57 12.56 33.66 0.42 -4.15 16 4 N -0.35 -5.91 3.99 -66.98 -0.27 -6.17 16 5 C 0.13 2.01 9.24 59.85 0.55 2.56 16 6 C 0.37 5.95 7.33 -152.50 -1.12 4.83 16 7 N -0.67 -10.12 5.42 -15.67 -0.08 -10.20 16 8 C 0.69 12.75 7.52 -86.92 -0.65 12.10 16 9 O -0.58 -12.35 11.03 5.28 0.06 -12.29 16 10 N -0.71 -13.54 5.07 -59.81 -0.30 -13.84 16 11 C 0.28 6.65 2.56 -69.08 -0.18 6.47 16 12 H 0.05 1.38 7.58 -51.93 -0.39 0.98 16 13 C -0.15 -3.54 9.26 37.16 0.34 -3.19 16 14 C -0.54 -13.42 8.73 -34.44 -0.30 -13.72 16 15 H 0.06 1.50 7.74 -52.48 -0.41 1.10 16 16 C 0.07 1.74 5.30 -17.82 -0.09 1.65 16 17 N -0.88 -23.78 11.32 55.43 0.63 -23.15 16 18 Si 0.90 19.84 29.54 -169.99 -5.02 14.82 16 19 H -0.27 -5.86 7.11 56.52 0.40 -5.46 16 20 H -0.28 -6.19 7.11 56.52 0.40 -5.79 16 21 H -0.28 -6.23 7.11 56.52 0.40 -5.83 16 22 C -0.23 -3.30 6.66 -39.76 -0.26 -3.57 16 23 Cl -0.05 -0.57 28.99 -51.86 -1.50 -2.07 16 24 H 0.08 0.64 8.14 -51.93 -0.42 0.22 16 25 H 0.08 0.67 8.14 -51.93 -0.42 0.24 16 26 H 0.08 0.68 7.99 -51.93 -0.42 0.26 16 27 H 0.10 1.68 6.87 -51.93 -0.36 1.33 16 28 H 0.07 0.94 8.14 -51.93 -0.42 0.51 16 29 H 0.09 1.50 6.19 -51.93 -0.32 1.18 16 30 H 0.42 5.08 8.84 -40.82 -0.36 4.72 16 31 H 0.39 6.34 8.56 -40.82 -0.35 5.99 16 32 H 0.03 0.63 8.14 -51.93 -0.42 0.20 16 33 H 0.09 2.40 6.07 -51.93 -0.32 2.08 16 34 H 0.02 0.37 8.14 -51.92 -0.42 -0.05 16 35 H 0.27 6.79 8.31 -40.82 -0.34 6.45 16 LS Contribution 312.22 15.07 4.71 4.71 Total: -1.00 -29.10 312.22 -7.47 -36.57 By element: Atomic # 1 Polarization: 12.31 SS G_CDS: -4.17 Total: 8.15 kcal Atomic # 6 Polarization: 9.57 SS G_CDS: -1.93 Total: 7.64 kcal Atomic # 7 Polarization: -57.91 SS G_CDS: 0.39 Total: -57.52 kcal Atomic # 8 Polarization: -12.35 SS G_CDS: 0.06 Total: -12.29 kcal Atomic # 14 Polarization: 19.84 SS G_CDS: -5.02 Total: 14.82 kcal Atomic # 17 Polarization: -0.57 SS G_CDS: -1.50 Total: -2.07 kcal Total LS contribution 4.71 Total: 4.71 kcal Total: -29.10 -7.47 -36.57 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000888644850.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 85.865 kcal (2) G-P(sol) polarization free energy of solvation -29.099 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 56.766 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.467 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.567 kcal (6) G-S(sol) free energy of system = (1) + (5) 49.298 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds