Wall clock time and date at job start Tue Mar 31 2020 06:07:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 N 1.30398 * 125.98126 * 2 1 4 4 N 1.39915 * 108.98710 * 180.02562 * 3 2 1 5 5 C 1.46490 * 125.74302 * 180.02562 * 4 3 2 6 6 C 1.34317 * 108.52065 * 0.02562 * 4 3 2 7 7 Cl 1.73603 * 126.32631 * 179.97438 * 6 4 3 8 8 C 1.38365 * 107.35374 * 359.97438 * 6 4 3 9 9 C 1.47148 * 126.44856 * 179.73992 * 8 6 4 10 10 O 1.21539 * 120.00096 * 90.02422 * 9 8 6 11 11 O 1.34775 * 119.99989 * 270.02162 * 9 8 6 12 12 C 1.45196 * 116.99723 * 180.02562 * 11 9 8 13 13 C 1.53004 * 109.47011 * 180.02562 * 12 11 9 14 14 C 1.52999 * 109.47567 * 179.97438 * 13 12 11 15 15 C 1.50699 * 109.47235 * 179.97438 * 14 13 12 16 16 H 1.08002 * 120.00000 * 0.02562 * 15 14 13 17 17 C 1.37878 * 119.99814 * 179.97438 * 15 14 13 18 18 N 1.31513 * 120.00046 * 0.02562 * 17 15 14 19 19 Si 1.86801 * 119.99902 * 180.02562 * 17 15 14 20 20 H 1.48497 * 109.46891 * 0.02562 * 19 17 15 21 21 H 1.48496 * 109.46938 * 120.00473 * 19 17 15 22 22 H 1.48500 * 109.47156 * 240.00161 * 19 17 15 23 23 H 1.09003 * 109.47238 * 269.97558 * 1 2 3 24 24 H 1.08997 * 109.47294 * 29.97603 * 1 2 3 25 25 H 1.09004 * 109.46897 * 149.97347 * 1 2 3 26 26 H 1.09005 * 109.47544 * 269.98170 * 5 4 3 27 27 H 1.09006 * 109.46993 * 29.97890 * 5 4 3 28 28 H 1.09004 * 109.47450 * 149.97787 * 5 4 3 29 29 H 1.08995 * 109.47348 * 299.99725 * 12 11 9 30 30 H 1.08999 * 109.47499 * 60.00278 * 12 11 9 31 31 H 1.09007 * 109.46756 * 300.00302 * 13 12 11 32 32 H 1.08999 * 109.46959 * 59.99707 * 13 12 11 33 33 H 1.09000 * 109.47094 * 300.00187 * 14 13 12 34 34 H 1.09007 * 109.46586 * 59.99575 * 14 13 12 35 35 H 0.96995 * 120.00376 * 179.97438 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2731 1.0552 0.0000 4 7 3.6112 0.6463 -0.0006 5 6 4.7770 1.5332 -0.0002 6 6 3.6469 -0.6964 -0.0015 7 17 5.0725 -1.6872 -0.0032 8 6 2.3377 -1.1442 -0.0009 9 6 1.8936 -2.5470 -0.0070 10 8 1.7120 -3.1315 1.0431 11 8 1.6881 -3.1838 -1.1769 12 6 1.2500 -4.5663 -1.1068 13 6 1.0716 -5.1172 -2.5230 14 6 0.6106 -6.5742 -2.4493 15 6 0.4344 -7.1166 -3.8442 16 1 0.6318 -6.4853 -4.6980 17 6 0.0220 -8.4190 -4.0304 18 7 -0.2180 -9.1878 -2.9908 19 14 -0.1958 -9.0915 -5.7595 20 1 0.1363 -8.0338 -6.7475 21 1 0.7078 -10.2533 -5.9562 22 1 -1.6042 -9.5222 -5.9494 23 1 -0.3634 -0.0004 1.0277 24 1 -0.3634 0.8902 -0.5134 25 1 -0.3633 -0.8898 -0.5143 26 1 5.0662 1.7537 -1.0278 27 1 4.5273 2.4613 0.5140 28 1 5.6051 1.0447 0.5134 29 1 1.9976 -5.1580 -0.5787 30 1 0.3009 -4.6201 -0.5734 31 1 0.3241 -4.5254 -3.0515 32 1 2.0209 -5.0634 -3.0560 33 1 1.3584 -7.1656 -1.9209 34 1 -0.3386 -6.6283 -1.9160 35 1 -0.5084 -10.1039 -3.1217 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000914625420.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:07:40 Heat of formation + Delta-G solvation = -30.432636 kcal Electronic energy + Delta-G solvation = -19617.742248 eV Core-core repulsion = 16257.342304 eV Total energy + Delta-G solvation = -3360.399944 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 286.087 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -41.81743 -39.80365 -37.38586 -36.32966 -34.51314 -33.94240 -31.73399 -30.88249 -29.86668 -27.27678 -26.29147 -23.80238 -22.57151 -21.01952 -20.39088 -20.09335 -18.02261 -17.12974 -16.40742 -16.23078 -16.20629 -15.83700 -15.04257 -14.45611 -13.99288 -13.90280 -13.64241 -13.29993 -13.08305 -12.95950 -12.63385 -12.22345 -12.10976 -12.07975 -12.03632 -11.86291 -11.14146 -10.96980 -10.67187 -10.61834 -10.40882 -10.35486 -9.69279 -9.64028 -9.50285 -9.14199 -9.01905 -8.37460 -6.02075 -4.04827 0.89926 1.03702 1.93027 2.07338 2.18294 3.04264 3.31182 3.38666 3.43151 3.95603 4.38722 4.45158 4.64684 4.72836 4.89616 4.92891 5.06572 5.34037 5.37045 5.46262 5.56142 5.61201 5.65431 5.96110 6.05107 6.14454 6.48965 6.57168 6.84477 7.00848 7.05268 7.62748 7.73728 7.92507 7.96809 8.37987 9.01754 9.59433 11.09422 Molecular weight = 286.09amu Principal moments of inertia in cm(-1) A = 0.026120 B = 0.003119 C = 0.003006 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1071.721539 B = 8974.095694 C = 9312.898147 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 C 0.130 3.870 3 N -0.272 5.272 4 N -0.352 5.352 5 C 0.092 3.908 6 C 0.166 3.834 7 Cl 0.019 6.981 8 C -0.236 4.236 9 C 0.543 3.457 10 O -0.494 6.494 11 O -0.347 6.347 12 C 0.066 3.934 13 C -0.109 4.109 14 C 0.024 3.976 15 C -0.520 4.520 16 H 0.058 0.942 17 C 0.056 3.944 18 N -0.894 5.894 19 Si 0.894 3.106 20 H -0.272 1.272 21 H -0.284 1.284 22 H -0.284 1.284 23 H 0.088 0.912 24 H 0.085 0.915 25 H 0.086 0.914 26 H 0.087 0.913 27 H 0.101 0.899 28 H 0.093 0.907 29 H 0.068 0.932 30 H 0.069 0.931 31 H 0.061 0.939 32 H 0.060 0.940 33 H 0.020 0.980 34 H 0.020 0.980 35 H 0.261 0.739 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.128 22.454 7.267 25.305 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C -0.036 4.036 3 N -0.095 5.095 4 N -0.133 5.133 5 C -0.048 4.048 6 C 0.009 3.991 7 Cl 0.047 6.953 8 C -0.251 4.251 9 C 0.384 3.616 10 O -0.381 6.381 11 O -0.263 6.263 12 C -0.007 4.007 13 C -0.146 4.146 14 C -0.013 4.013 15 C -0.558 4.558 16 H 0.076 0.924 17 C -0.145 4.145 18 N -0.534 5.534 19 Si 0.722 3.278 20 H -0.197 1.197 21 H -0.210 1.210 22 H -0.210 1.210 23 H 0.107 0.893 24 H 0.104 0.896 25 H 0.105 0.895 26 H 0.105 0.895 27 H 0.119 0.881 28 H 0.111 0.889 29 H 0.086 0.914 30 H 0.087 0.913 31 H 0.079 0.921 32 H 0.079 0.921 33 H 0.038 0.962 34 H 0.038 0.962 35 H 0.070 0.930 Dipole moment (debyes) X Y Z Total from point charges 9.312 23.340 7.607 26.256 hybrid contribution 0.234 -1.524 -0.789 1.732 sum 9.546 21.816 6.818 24.770 Atomic orbital electron populations 1.20381 0.84911 1.04586 1.04113 1.22325 0.97352 0.87796 0.96159 1.77287 0.84644 1.21277 1.26291 1.48324 1.06816 1.02500 1.55678 1.22114 0.83647 0.94475 1.04583 1.21863 0.89826 0.84352 1.03068 1.98458 1.34923 1.65328 1.96554 1.18932 0.90665 0.92714 1.22749 1.19815 0.74083 0.85235 0.82486 1.90859 1.46904 1.67150 1.33223 1.86666 1.77409 1.29461 1.32740 1.23574 0.99679 0.75964 1.01466 1.21769 1.01767 0.99470 0.91621 1.19060 0.96728 0.87823 0.97730 1.21216 1.45383 0.96936 0.92302 0.92374 1.25028 0.95433 0.97054 0.96971 1.69972 1.46403 1.07633 1.29355 0.86501 0.77730 0.78949 0.84632 1.19664 1.21008 1.20977 0.89339 0.89591 0.89534 0.89490 0.88085 0.88883 0.91371 0.91266 0.92071 0.92140 0.96207 0.96169 0.92962 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.78 10.28 36.00 0.37 -0.41 16 2 C 0.13 1.64 7.27 -82.00 -0.60 1.05 16 3 N -0.27 -3.29 12.49 33.91 0.42 -2.87 16 4 N -0.35 -3.74 3.98 -64.30 -0.26 -3.99 16 5 C 0.09 0.51 11.28 59.84 0.67 1.19 16 6 C 0.17 2.07 7.54 -16.42 -0.12 1.94 16 7 Cl 0.02 0.21 28.56 -51.86 -1.48 -1.27 16 8 C -0.24 -3.42 6.01 -105.03 -0.63 -4.05 16 9 C 0.54 9.15 7.34 34.35 0.25 9.41 16 10 O -0.49 -9.40 16.90 -19.30 -0.33 -9.72 16 11 O -0.35 -6.14 10.23 -40.70 -0.42 -6.56 16 12 C 0.07 1.24 5.48 37.16 0.20 1.44 16 13 C -0.11 -2.27 5.53 -26.73 -0.15 -2.42 16 14 C 0.02 0.61 4.97 -27.88 -0.14 0.47 16 15 C -0.52 -14.67 9.11 -34.44 -0.31 -14.98 16 16 H 0.06 1.59 7.74 -52.49 -0.41 1.18 16 17 C 0.06 1.61 5.46 -17.82 -0.10 1.52 16 18 N -0.89 -26.83 13.29 55.43 0.74 -26.09 16 19 Si 0.89 21.58 29.54 -169.99 -5.02 16.56 16 20 H -0.27 -6.41 7.11 56.52 0.40 -6.01 16 21 H -0.28 -6.78 7.11 56.52 0.40 -6.38 16 22 H -0.28 -6.77 7.11 56.52 0.40 -6.37 16 23 H 0.09 0.75 8.14 -51.93 -0.42 0.32 16 24 H 0.09 0.67 8.14 -51.93 -0.42 0.25 16 25 H 0.09 0.86 8.00 -51.93 -0.42 0.45 16 26 H 0.09 0.36 8.14 -51.93 -0.42 -0.06 16 27 H 0.10 0.41 8.14 -51.93 -0.42 -0.01 16 28 H 0.09 0.37 7.77 -51.93 -0.40 -0.03 16 29 H 0.07 1.28 8.14 -51.93 -0.42 0.86 16 30 H 0.07 1.27 8.14 -51.93 -0.42 0.85 16 31 H 0.06 1.25 8.14 -51.93 -0.42 0.82 16 32 H 0.06 1.24 8.14 -51.93 -0.42 0.82 16 33 H 0.02 0.53 8.14 -51.93 -0.42 0.11 16 34 H 0.02 0.54 8.14 -51.93 -0.42 0.12 16 35 H 0.26 7.35 8.31 -40.82 -0.34 7.01 16 LS Contribution 329.80 15.07 4.97 4.97 Total: -1.00 -33.40 329.80 -6.51 -39.90 By element: Atomic # 1 Polarization: -1.49 SS G_CDS: -4.59 Total: -6.08 kcal Atomic # 6 Polarization: -4.30 SS G_CDS: -0.55 Total: -4.85 kcal Atomic # 7 Polarization: -33.86 SS G_CDS: 0.90 Total: -32.95 kcal Atomic # 8 Polarization: -15.54 SS G_CDS: -0.74 Total: -16.28 kcal Atomic # 14 Polarization: 21.58 SS G_CDS: -5.02 Total: 16.56 kcal Atomic # 17 Polarization: 0.21 SS G_CDS: -1.48 Total: -1.27 kcal Total LS contribution 4.97 Total: 4.97 kcal Total: -33.40 -6.51 -39.90 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000914625420.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 9.471 kcal (2) G-P(sol) polarization free energy of solvation -33.398 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.927 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.506 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.904 kcal (6) G-S(sol) free energy of system = (1) + (5) -30.433 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds