Wall clock time and date at job start Tue Mar 31 2020 05:32:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.36610 * 127.11738 * 2 1 4 4 C 1.50696 * 126.36079 * 359.97438 * 3 2 1 5 5 Cl 1.80298 * 109.47078 * 270.30675 * 4 3 2 6 6 N 1.30329 * 107.27745 * 180.26545 * 3 2 1 7 7 N 1.28536 * 109.99680 * 359.73850 * 6 3 2 8 8 C 1.31042 * 109.85704 * 0.02562 * 7 6 3 9 9 O 1.35530 * 126.44529 * 180.02562 * 8 7 6 10 10 C 1.42905 * 117.00180 * 0.02562 * 9 8 7 11 11 C 1.53935 * 113.73498 * 248.76775 * 10 9 8 12 12 N 1.48186 * 86.10168 * 221.95978 * 11 10 9 13 13 C 1.46895 * 111.07427 * 137.52231 * 12 11 10 14 14 C 1.50708 * 109.46908 * 70.56351 * 13 12 11 15 15 H 1.07996 * 119.99785 * 0.02562 * 14 13 12 16 16 C 1.37883 * 119.99722 * 180.02562 * 14 13 12 17 17 N 1.31513 * 119.99789 * 180.02562 * 16 14 13 18 18 Si 1.86801 * 120.00031 * 0.02562 * 16 14 13 19 19 H 1.48492 * 109.47081 * 89.99879 * 18 16 14 20 20 H 1.48497 * 109.47003 * 210.00173 * 18 16 14 21 21 H 1.48502 * 109.47077 * 329.99929 * 18 16 14 22 22 C 1.47960 * 90.79916 * 24.59913 * 12 11 10 23 23 H 1.08996 * 109.46764 * 270.17358 * 1 2 3 24 24 H 1.09004 * 109.47386 * 30.16890 * 1 2 3 25 25 H 1.08997 * 109.46988 * 150.17139 * 1 2 3 26 26 H 1.08999 * 109.47274 * 30.30897 * 4 3 2 27 27 H 1.09002 * 109.47312 * 150.31137 * 4 3 2 28 28 H 1.08998 * 112.93595 * 20.33802 * 10 9 8 29 29 H 1.09000 * 113.76137 * 336.24113 * 11 10 9 30 30 H 1.08998 * 113.75757 * 107.60309 * 11 10 9 31 31 H 1.08999 * 109.47345 * 190.56501 * 13 12 11 32 32 H 1.08996 * 109.46906 * 310.56784 * 13 12 11 33 33 H 0.96993 * 119.99940 * 180.02562 * 17 16 14 34 34 H 1.09001 * 113.75866 * 221.08211 * 22 12 11 35 35 H 1.09001 * 113.75942 * 89.72328 * 22 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2894 1.0893 0.0000 4 6 1.8608 2.5341 -0.0005 5 17 1.6818 3.1072 -1.7006 6 7 3.5153 0.6470 -0.0058 7 7 3.5189 -0.6383 -0.0039 8 6 2.2876 -1.0868 0.0027 9 8 1.9042 -2.3868 0.0070 10 6 2.9420 -3.3693 0.0046 11 6 3.0356 -4.1685 -1.3077 12 7 3.2402 -5.3592 -0.4497 13 6 2.4698 -6.5070 -0.9465 14 6 3.0808 -7.0037 -2.2316 15 1 3.9543 -6.5157 -2.6381 16 6 2.5246 -8.0811 -2.8881 17 7 3.0580 -8.5148 -4.0092 18 14 1.0134 -8.9246 -2.1852 19 1 -0.2100 -8.2799 -2.7263 20 1 1.0260 -10.3600 -2.5652 21 1 1.0229 -8.8043 -0.7051 22 6 2.5401 -4.6965 0.6727 23 1 -0.3633 0.0031 1.0276 24 1 -0.3634 0.8885 -0.5165 25 1 -0.3633 -0.8915 -0.5112 26 1 0.9068 2.6303 0.5177 27 1 2.6132 3.1365 0.5086 28 1 3.8990 -2.9771 0.3487 29 1 2.1054 -4.1910 -1.8755 30 1 3.9014 -3.9113 -1.9177 31 1 2.4867 -7.3048 -0.2040 32 1 1.4395 -6.2017 -1.1284 33 1 2.6666 -9.2724 -4.4713 34 1 3.0108 -4.8605 1.6421 35 1 1.4646 -4.8738 0.6855 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001230668272.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:32:44 Heat of formation + Delta-G solvation = 86.646578 kcal Electronic energy + Delta-G solvation = -20034.036841 eV Core-core repulsion = 16711.006584 eV Total energy + Delta-G solvation = -3323.030257 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 286.094 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -43.23860 -39.91220 -37.41725 -36.57034 -35.31127 -32.85181 -31.84561 -29.85322 -28.00377 -27.37720 -25.95151 -25.51625 -22.77333 -21.61463 -20.91634 -19.47049 -18.52310 -17.22955 -16.89708 -16.84018 -15.75528 -15.17146 -14.92541 -14.85589 -14.43185 -14.27193 -14.07281 -13.62332 -13.26001 -12.95704 -12.75702 -12.36437 -12.21274 -12.11053 -11.86866 -11.16978 -11.10114 -10.98770 -10.81606 -10.57579 -10.45948 -10.34801 -10.01021 -9.86436 -9.36829 -8.79262 -8.68047 -8.17287 -6.12438 -4.11691 1.06499 1.52409 2.04186 2.75295 3.16096 3.21745 3.30255 3.31133 3.66137 4.09325 4.32957 4.34534 4.41659 4.63582 4.64775 4.69426 4.77932 5.00972 5.17569 5.21044 5.25657 5.49294 5.69423 5.77551 5.88361 6.05301 6.19390 6.28692 6.38632 6.66032 7.14735 7.16907 7.60936 7.66747 8.45068 8.50597 8.95466 9.47559 11.00619 Molecular weight = 286.09amu Principal moments of inertia in cm(-1) A = 0.029485 B = 0.003187 C = 0.003140 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 949.421814 B = 8784.307428 C = 8914.960108 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.074 3.926 2 N -0.471 5.471 3 C 0.138 3.862 4 C 0.060 3.940 5 Cl -0.156 7.156 6 N -0.241 5.241 7 N -0.327 5.327 8 C 0.391 3.609 9 O -0.284 6.284 10 C 0.062 3.938 11 C 0.013 3.987 12 N -0.458 5.458 13 C 0.133 3.867 14 C -0.516 4.516 15 H 0.081 0.919 16 C 0.070 3.930 17 N -0.896 5.896 18 Si 0.876 3.124 19 H -0.277 1.277 20 H -0.284 1.284 21 H -0.266 1.266 22 C 0.002 3.998 23 H 0.083 0.917 24 H 0.093 0.907 25 H 0.097 0.903 26 H 0.113 0.887 27 H 0.132 0.868 28 H 0.123 0.877 29 H 0.078 0.922 30 H 0.095 0.905 31 H 0.035 0.965 32 H -0.006 1.006 33 H 0.265 0.735 34 H 0.095 0.905 35 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.672 22.234 11.031 26.292 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 N -0.174 5.174 3 C -0.128 4.128 4 C -0.005 4.005 5 Cl -0.130 7.130 6 N -0.084 5.084 7 N -0.183 5.183 8 C 0.087 3.913 9 O -0.185 6.185 10 C 0.006 3.994 11 C -0.116 4.116 12 N -0.183 5.183 13 C 0.006 3.994 14 C -0.554 4.554 15 H 0.099 0.901 16 C -0.132 4.132 17 N -0.535 5.535 18 Si 0.703 3.297 19 H -0.203 1.203 20 H -0.210 1.210 21 H -0.191 1.191 22 C -0.127 4.127 23 H 0.102 0.898 24 H 0.111 0.889 25 H 0.116 0.884 26 H 0.131 0.869 27 H 0.150 0.850 28 H 0.140 0.860 29 H 0.097 0.903 30 H 0.113 0.887 31 H 0.053 0.947 32 H 0.011 0.989 33 H 0.075 0.925 34 H 0.114 0.886 35 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -6.855 21.589 10.838 25.111 hybrid contribution -3.126 -0.547 -0.055 3.174 sum -9.980 21.042 10.783 25.664 Atomic orbital electron populations 1.22156 0.74652 1.05763 1.04270 1.45621 1.08868 1.04655 1.58218 1.24021 0.87356 0.90403 1.11001 1.22306 1.05476 0.87037 0.85658 1.98773 1.98395 1.89690 1.26105 1.74001 1.16724 1.02749 1.14878 1.74728 1.14361 1.03132 1.26099 1.22313 0.86152 0.84224 0.98567 1.86074 1.36862 1.07642 1.87962 1.25232 0.90458 0.83822 0.99881 1.24314 1.02776 0.89684 0.94784 1.68607 1.43666 1.02806 1.03211 1.20697 0.91524 0.89888 0.97330 1.20944 1.14741 1.15014 1.04716 0.90118 1.24912 0.97027 0.96578 0.94684 1.69889 1.40776 1.26223 1.16585 0.86847 0.83596 0.79253 0.79991 1.20295 1.20961 1.19117 1.24358 0.99461 0.90181 0.98673 0.89807 0.88885 0.88386 0.86901 0.85001 0.85960 0.90344 0.88707 0.94655 0.98876 0.92514 0.88639 0.90814 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.47 10.94 59.85 0.65 1.13 16 2 N -0.47 -5.17 3.20 -122.49 -0.39 -5.57 16 3 C 0.14 1.50 7.44 -154.11 -1.15 0.35 16 4 C 0.06 0.38 6.86 36.00 0.25 0.63 16 5 Cl -0.16 -1.32 29.13 -51.86 -1.51 -2.83 16 6 N -0.24 -3.55 12.18 32.97 0.40 -3.15 16 7 N -0.33 -5.33 11.13 29.65 0.33 -5.00 16 8 C 0.39 5.68 8.63 -88.76 -0.77 4.92 16 9 O -0.28 -4.26 10.20 -18.28 -0.19 -4.45 16 10 C 0.06 1.00 4.43 -25.80 -0.11 0.88 16 11 C 0.01 0.25 7.32 -2.63 -0.02 0.23 16 12 N -0.46 -9.51 6.25 -239.76 -1.50 -11.01 16 13 C 0.13 3.17 3.65 -4.97 -0.02 3.15 16 14 C -0.52 -14.65 9.40 -34.43 -0.32 -14.97 16 15 H 0.08 2.51 8.04 -52.49 -0.42 2.09 16 16 C 0.07 2.02 5.47 -17.82 -0.10 1.93 16 17 N -0.90 -27.38 13.96 55.43 0.77 -26.61 16 18 Si 0.88 21.16 27.47 -169.99 -4.67 16.49 16 19 H -0.28 -6.55 7.11 56.52 0.40 -6.15 16 20 H -0.28 -6.81 7.11 56.52 0.40 -6.40 16 21 H -0.27 -6.16 6.54 56.52 0.37 -5.79 16 22 C 0.00 0.04 7.81 -2.76 -0.02 0.02 16 23 H 0.08 0.37 8.14 -51.93 -0.42 -0.05 16 24 H 0.09 0.39 7.90 -51.93 -0.41 -0.02 16 25 H 0.10 0.67 8.14 -51.93 -0.42 0.25 16 26 H 0.11 0.34 7.94 -51.93 -0.41 -0.07 16 27 H 0.13 0.62 8.14 -51.93 -0.42 0.20 16 28 H 0.12 1.95 7.28 -51.93 -0.38 1.57 16 29 H 0.08 1.54 7.79 -51.93 -0.40 1.14 16 30 H 0.09 1.83 8.14 -51.93 -0.42 1.41 16 31 H 0.04 0.85 7.20 -51.93 -0.37 0.48 16 32 H -0.01 -0.15 7.12 -51.93 -0.37 -0.52 16 33 H 0.26 7.55 8.31 -40.82 -0.34 7.21 16 34 H 0.10 1.36 8.14 -51.93 -0.42 0.94 16 35 H 0.07 1.16 7.79 -51.93 -0.40 0.75 16 LS Contribution 316.31 15.07 4.77 4.77 Total: -1.00 -34.02 316.31 -8.05 -42.07 By element: Atomic # 1 Polarization: 1.47 SS G_CDS: -4.46 Total: -2.98 kcal Atomic # 6 Polarization: -0.13 SS G_CDS: -1.61 Total: -1.74 kcal Atomic # 7 Polarization: -50.95 SS G_CDS: -0.39 Total: -51.33 kcal Atomic # 8 Polarization: -4.26 SS G_CDS: -0.19 Total: -4.45 kcal Atomic # 14 Polarization: 21.16 SS G_CDS: -4.67 Total: 16.49 kcal Atomic # 17 Polarization: -1.32 SS G_CDS: -1.51 Total: -2.83 kcal Total LS contribution 4.77 Total: 4.77 kcal Total: -34.02 -8.05 -42.07 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001230668272.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 128.714 kcal (2) G-P(sol) polarization free energy of solvation -34.020 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 94.694 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.047 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.068 kcal (6) G-S(sol) free energy of system = (1) + (5) 86.647 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds