Wall clock time and date at job start Tue Mar 31 2020 06:05:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 H 1.09002 * 109.47178 * 2 1 4 4 C 1.50700 * 109.47055 * 119.99545 * 2 1 3 5 5 O 1.21218 * 120.00072 * 119.99948 * 4 2 1 6 6 O 1.34309 * 120.00154 * 300.00100 * 4 2 1 7 7 C 1.34924 * 117.00044 * 179.97438 * 6 4 2 8 8 H 1.07997 * 120.00257 * 359.97438 * 7 6 4 9 9 C 1.38748 * 119.99822 * 179.72786 * 7 6 4 10 10 N 1.31442 * 120.00231 * 359.97438 * 9 7 6 11 11 Si 1.86800 * 120.00017 * 180.02562 * 9 7 6 12 12 H 1.48500 * 109.47045 * 359.97438 * 11 9 7 13 13 H 1.48495 * 109.47790 * 119.99544 * 11 9 7 14 14 H 1.48504 * 109.47198 * 239.99796 * 11 9 7 15 15 C 1.50693 * 109.47086 * 239.99395 * 2 1 3 16 16 C 1.38251 * 120.00325 * 300.00229 * 15 2 1 17 17 C 1.38219 * 120.00166 * 179.97438 * 16 15 2 18 18 C 1.38258 * 119.99672 * 359.97438 * 17 16 15 19 19 C 1.38210 * 120.00369 * 359.97438 * 18 17 16 20 20 C 1.38216 * 119.99810 * 119.72733 * 15 2 1 21 21 C 1.50705 * 120.00125 * 0.02562 * 20 15 2 22 22 F 1.39895 * 109.47203 * 179.97438 * 21 20 15 23 23 F 1.39904 * 109.46722 * 299.99611 * 21 20 15 24 24 F 1.39900 * 109.47198 * 59.99728 * 21 20 15 25 25 H 1.08999 * 109.47156 * 60.00374 * 1 2 3 26 26 H 1.08997 * 109.47508 * 180.02562 * 1 2 3 27 27 H 1.09008 * 109.47141 * 300.00418 * 1 2 3 28 28 H 0.97009 * 119.99891 * 180.02562 * 10 9 7 29 29 H 1.08003 * 120.00217 * 359.97438 * 16 15 2 30 30 H 1.07993 * 120.00112 * 179.97438 * 17 16 15 31 31 H 1.08002 * 119.99704 * 179.97438 * 18 17 16 32 32 H 1.07998 * 120.00161 * 179.97438 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0323 -0.7103 1.2305 5 8 2.7292 -1.6959 1.1194 6 8 1.7078 -0.2514 2.4504 7 6 2.1898 -0.9339 3.5098 8 1 2.8062 -1.8070 3.3546 9 6 1.8977 -0.5110 4.7986 10 7 1.1520 0.5548 4.9874 11 14 2.5656 -1.4554 6.2653 12 1 3.3713 -2.6075 5.7871 13 1 3.4206 -0.5588 7.0839 14 1 1.4353 -1.9513 7.0911 15 6 2.0323 -0.7105 -1.2303 16 6 1.6983 -2.0341 -1.4491 17 6 2.1586 -2.6856 -2.5778 18 6 2.9526 -2.0134 -3.4884 19 6 3.2856 -0.6899 -3.2703 20 6 2.8222 -0.0372 -2.1430 21 6 3.1817 1.4073 -1.9075 22 9 3.9822 1.8660 -2.9590 23 9 2.0132 2.1738 -1.8416 24 9 3.8837 1.5227 -0.7029 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3634 -1.0276 0.0005 27 1 -0.3634 0.5139 0.8900 28 1 0.9481 0.8506 5.8885 29 1 1.0777 -2.5591 -0.7379 30 1 1.8980 -3.7197 -2.7485 31 1 3.3126 -2.5226 -4.3702 32 1 3.9062 -0.1650 -3.9815 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000745307484.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:05:40 Heat of formation + Delta-G solvation = -207.201820 kcal Electronic energy + Delta-G solvation = -23393.308450 eV Core-core repulsion = 19290.382005 eV Total energy + Delta-G solvation = -4102.926446 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 288.076 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -50.09278 -47.61890 -47.45021 -39.96747 -38.62968 -35.38566 -33.85190 -32.13264 -31.89988 -29.58172 -25.88936 -25.64011 -24.34305 -22.38607 -21.76629 -19.67707 -18.40972 -18.32616 -18.10800 -17.71091 -16.50423 -15.98746 -15.22763 -14.88062 -14.62163 -14.46190 -14.34176 -14.25671 -14.15421 -13.92380 -13.63799 -13.62264 -13.48263 -12.87525 -12.71210 -12.57746 -12.02920 -11.82496 -11.62381 -11.45486 -11.22679 -10.99522 -10.75421 -10.40446 -10.35259 -9.79041 -9.22071 -8.92895 -8.78687 -8.58021 -6.41107 -4.08917 0.98711 1.31569 2.77040 3.09304 3.19104 3.26474 3.49260 3.52503 3.80619 3.96121 4.12586 4.45237 4.56968 4.69153 4.88198 4.96129 5.11277 5.25925 5.39790 5.46206 5.52514 5.69595 5.86358 6.00981 6.11357 6.18346 6.35443 6.44892 6.54655 6.72866 6.87605 7.39779 7.94734 8.68928 9.07659 9.84436 10.76790 Molecular weight = 288.08amu Principal moments of inertia in cm(-1) A = 0.021741 B = 0.005261 C = 0.004796 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1287.567843 B = 5321.331449 C = 5836.837009 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.136 4.136 2 C -0.056 4.056 3 H 0.103 0.897 4 C 0.406 3.594 5 O -0.548 6.548 6 O -0.209 6.209 7 C -0.381 4.381 8 H 0.096 0.904 9 C 0.042 3.958 10 N -0.864 5.864 11 Si 0.942 3.058 12 H -0.266 1.266 13 H -0.276 1.276 14 H -0.276 1.276 15 C -0.004 4.004 16 C -0.083 4.083 17 C -0.090 4.090 18 C -0.127 4.127 19 C -0.079 4.079 20 C -0.180 4.180 21 C 0.506 3.494 22 F -0.181 7.181 23 F -0.175 7.175 24 F -0.169 7.169 25 H 0.063 0.937 26 H 0.061 0.939 27 H 0.081 0.919 28 H 0.269 0.731 29 H 0.134 0.866 30 H 0.130 0.870 31 H 0.131 0.869 32 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.315 -1.200 -15.975 16.023 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.193 4.193 2 C -0.075 4.075 3 H 0.121 0.879 4 C 0.252 3.748 5 O -0.445 6.445 6 O -0.115 6.115 7 C -0.458 4.458 8 H 0.114 0.886 9 C -0.162 4.162 10 N -0.501 5.501 11 Si 0.767 3.233 12 H -0.190 1.190 13 H -0.202 1.202 14 H -0.202 1.202 15 C -0.004 4.004 16 C -0.101 4.101 17 C -0.108 4.108 18 C -0.145 4.145 19 C -0.097 4.097 20 C -0.181 4.181 21 C 0.452 3.548 22 F -0.162 7.162 23 F -0.156 7.156 24 F -0.150 7.150 25 H 0.082 0.918 26 H 0.080 0.920 27 H 0.100 0.900 28 H 0.079 0.921 29 H 0.152 0.848 30 H 0.148 0.852 31 H 0.148 0.852 32 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 0.412 -1.275 -15.788 15.844 hybrid contribution 0.506 -0.103 0.828 0.976 sum 0.918 -1.378 -14.959 15.051 Atomic orbital electron populations 1.21739 0.91172 1.02942 1.03439 1.19978 0.98619 1.00029 0.88881 0.87930 1.22643 0.81757 0.84726 0.85697 1.90572 1.38981 1.27591 1.87350 1.83863 1.63423 1.51715 1.12531 1.21282 1.31838 1.10830 0.81821 0.88625 1.25328 0.96399 0.96513 0.97926 1.70005 1.34921 1.22599 1.22536 0.85628 0.78654 0.79198 0.79864 1.18973 1.20153 1.20160 1.19227 0.93692 0.94463 0.93052 1.21011 0.99360 0.93019 0.96734 1.21344 0.95957 0.99964 0.93530 1.21072 0.99341 0.94025 1.00104 1.20873 0.98154 0.95170 0.95510 1.19808 1.05955 0.92313 1.00071 1.18335 0.74654 0.87683 0.74160 1.93132 1.74624 1.90552 1.57883 1.93206 1.48404 1.78078 1.95937 1.93273 1.79299 1.96662 1.45810 0.91772 0.91998 0.89965 0.92116 0.84818 0.85200 0.85155 0.84699 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.23 8.94 37.16 0.33 -1.90 16 2 C -0.06 -1.08 2.38 -92.93 -0.22 -1.30 16 3 H 0.10 1.98 4.72 -51.93 -0.25 1.74 16 4 C 0.41 10.09 7.07 36.01 0.25 10.35 16 5 O -0.55 -14.56 14.35 -19.06 -0.27 -14.84 16 6 O -0.21 -5.99 9.65 -20.71 -0.20 -6.19 16 7 C -0.38 -11.31 9.64 30.92 0.30 -11.02 16 8 H 0.10 2.86 6.86 -52.49 -0.36 2.50 16 9 C 0.04 1.20 5.49 -17.53 -0.10 1.10 16 10 N -0.86 -25.32 13.67 55.48 0.76 -24.57 16 11 Si 0.94 21.38 29.55 -169.99 -5.02 16.35 16 12 H -0.27 -5.95 7.11 56.52 0.40 -5.55 16 13 H -0.28 -6.08 7.11 56.52 0.40 -5.68 16 14 H -0.28 -6.03 7.11 56.52 0.40 -5.63 16 15 C 0.00 -0.07 4.36 -104.63 -0.46 -0.52 16 16 C -0.08 -1.29 7.93 -39.58 -0.31 -1.60 16 17 C -0.09 -1.10 10.05 -39.58 -0.40 -1.50 16 18 C -0.13 -1.42 10.05 -39.58 -0.40 -1.82 16 19 C -0.08 -0.99 9.43 -39.58 -0.37 -1.36 16 20 C -0.18 -2.77 5.37 -104.62 -0.56 -3.34 16 21 C 0.51 7.86 2.78 36.01 0.10 7.96 16 22 F -0.18 -2.49 15.97 2.25 0.04 -2.46 16 23 F -0.17 -2.67 15.83 2.25 0.04 -2.64 16 24 F -0.17 -3.07 15.82 2.25 0.04 -3.03 16 25 H 0.06 0.87 8.14 -51.93 -0.42 0.45 16 26 H 0.06 0.95 7.39 -51.93 -0.38 0.57 16 27 H 0.08 1.45 8.11 -51.92 -0.42 1.03 16 28 H 0.27 7.21 8.31 -40.82 -0.34 6.87 16 29 H 0.13 2.10 7.52 -52.48 -0.39 1.70 16 30 H 0.13 1.21 8.06 -52.49 -0.42 0.79 16 31 H 0.13 1.02 8.06 -52.49 -0.42 0.60 16 32 H 0.14 1.38 7.16 -52.49 -0.38 1.00 16 LS Contribution 293.98 15.07 4.43 4.43 Total: -1.00 -32.86 293.98 -4.62 -37.47 By element: Atomic # 1 Polarization: 2.98 SS G_CDS: -2.58 Total: 0.40 kcal Atomic # 6 Polarization: -3.11 SS G_CDS: -1.83 Total: -4.94 kcal Atomic # 7 Polarization: -25.32 SS G_CDS: 0.76 Total: -24.57 kcal Atomic # 8 Polarization: -20.55 SS G_CDS: -0.47 Total: -21.02 kcal Atomic # 9 Polarization: -8.23 SS G_CDS: 0.11 Total: -8.13 kcal Atomic # 14 Polarization: 21.38 SS G_CDS: -5.02 Total: 16.35 kcal Total LS contribution 4.43 Total: 4.43 kcal Total: -32.86 -4.62 -37.47 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000745307484.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -169.728 kcal (2) G-P(sol) polarization free energy of solvation -32.856 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -202.585 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.617 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.474 kcal (6) G-S(sol) free energy of system = (1) + (5) -207.202 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds