Wall clock time and date at job start Tue Mar 31 2020 06:03:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17400 * 1 3 3 C 1.47202 * 179.97438 * 2 1 4 4 N 1.46501 * 109.47111 * 356.63207 * 3 2 1 5 5 C 1.36904 * 120.00387 * 115.21835 * 4 3 2 6 6 H 1.07999 * 120.00340 * 103.29798 * 5 4 3 7 7 C 1.39025 * 119.99980 * 283.57001 * 5 4 3 8 8 N 1.31384 * 119.99691 * 24.84486 * 7 5 4 9 9 Si 1.86796 * 120.00232 * 204.84704 * 7 5 4 10 10 H 1.48495 * 109.47241 * 59.99989 * 9 7 5 11 11 H 1.48499 * 109.47222 * 180.02562 * 9 7 5 12 12 H 1.48505 * 109.46954 * 300.00078 * 9 7 5 13 13 C 1.34786 * 119.99348 * 295.20842 * 4 3 2 14 14 O 1.21624 * 119.99434 * 159.82591 * 13 4 3 15 15 C 1.47489 * 120.00147 * 339.83185 * 13 4 3 16 16 C 1.39033 * 119.89276 * 22.37680 * 15 13 4 17 17 C 1.39692 * 119.58207 * 179.97438 * 16 15 13 18 18 N 1.35470 * 133.00758 * 179.97438 * 17 16 15 19 19 N 1.28637 * 110.14134 * 180.02562 * 18 17 16 20 20 N 1.40225 * 109.53184 * 0.02562 * 19 18 17 21 21 H 0.96996 * 126.65346 * 180.02562 * 20 19 18 22 22 C 1.37311 * 106.68913 * 359.97438 * 20 19 18 23 23 C 1.39193 * 133.67602 * 180.02562 * 22 20 19 24 24 C 1.36573 * 120.13922 * 179.76331 * 23 22 20 25 25 F 1.35100 * 119.80661 * 180.24547 * 24 23 22 26 26 H 4.40637 * 5.51268 * 179.97438 * 4 1 2 27 27 H 1.08996 * 109.47045 * 236.62602 * 3 2 1 28 28 H 1.09006 * 109.46727 * 116.62523 * 3 2 1 29 29 H 0.96992 * 120.00195 * 179.97438 * 8 7 5 30 30 H 1.07997 * 120.20669 * 359.95682 * 16 15 13 31 31 H 1.08002 * 119.93091 * 359.96364 * 23 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1350 -1.3780 0.0811 5 6 3.8397 -1.9169 -0.9616 6 1 4.9128 -2.0172 -0.8935 7 6 3.1744 -2.3299 -2.1104 8 7 2.0159 -1.7967 -2.4261 9 14 3.9277 -3.6427 -3.2050 10 1 4.1077 -4.8937 -2.4255 11 1 3.0281 -3.9022 -4.3576 12 1 5.2466 -3.1754 -3.7025 13 6 2.8911 -2.1156 1.1826 14 8 2.9556 -3.3290 1.1283 15 6 2.5461 -1.4515 2.4535 16 6 2.0214 -0.1640 2.4424 17 6 1.6964 0.4586 3.6498 18 7 1.1827 1.6749 3.9534 19 7 1.0581 1.7976 5.2278 20 7 1.5000 0.6249 5.8571 21 1 1.5152 0.4502 6.8111 22 6 1.9060 -0.2283 4.8608 23 6 2.4317 -1.5171 4.8540 24 6 2.7430 -2.1245 3.6710 25 9 3.2483 -3.3774 3.6719 26 1 -1.0497 -0.0003 0.0002 27 1 3.0091 0.5661 0.8582 28 1 3.0091 0.4614 -0.9188 29 1 1.5519 -2.0845 -3.2277 30 1 1.8664 0.3515 1.5061 31 1 2.5907 -2.0392 5.7859 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000799086370.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:03:33 Heat of formation + Delta-G solvation = 144.630385 kcal Electronic energy + Delta-G solvation = -22374.020791 eV Core-core repulsion = 18769.332873 eV Total energy + Delta-G solvation = -3604.687919 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 288.076 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -48.72993 -42.10198 -39.30651 -36.62680 -35.45812 -33.75724 -32.76424 -31.36071 -30.12843 -29.92673 -26.75190 -25.22176 -23.93861 -23.04191 -22.36828 -20.18467 -18.60228 -17.99424 -17.53403 -17.29099 -16.33897 -15.99105 -15.74019 -15.38538 -15.11991 -14.69371 -14.39285 -14.05514 -13.79672 -13.59062 -13.01325 -12.50126 -12.28384 -12.07639 -11.67491 -11.56863 -11.42161 -11.38975 -11.12129 -10.78697 -10.39014 -10.25231 -9.78118 -9.43051 -8.78291 -8.64679 -8.61208 -8.39634 -7.28824 -6.38820 -4.33734 0.36589 0.95784 2.06692 2.23826 3.18790 3.23635 3.30921 3.38430 3.48747 3.55921 3.95218 4.09459 4.18010 4.33759 4.48596 4.65172 4.71352 4.95871 5.04167 5.11720 5.29598 5.44748 5.75749 5.91580 5.97723 6.09210 6.19853 6.47860 6.57203 6.72475 6.78349 7.49640 7.87010 8.34357 8.39978 8.52618 8.99488 9.17568 9.84652 10.64263 Molecular weight = 288.08amu Principal moments of inertia in cm(-1) A = 0.023610 B = 0.005850 C = 0.004926 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1185.649824 B = 4785.113044 C = 5682.777565 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.214 4.214 2 C -0.163 4.163 3 C 0.192 3.808 4 N -0.437 5.437 5 C -0.354 4.354 6 H 0.083 0.917 7 C 0.079 3.921 8 N -0.834 5.834 9 Si 0.903 3.097 10 H -0.268 1.268 11 H -0.286 1.286 12 H -0.272 1.272 13 C 0.535 3.465 14 O -0.534 6.534 15 C -0.166 4.166 16 C -0.020 4.020 17 C -0.037 4.037 18 N -0.195 5.195 19 N -0.012 5.012 20 N -0.501 5.501 21 H 0.446 0.554 22 C 0.127 3.873 23 C -0.191 4.191 24 C 0.210 3.790 25 F -0.106 7.106 26 H 0.207 0.793 27 H 0.076 0.924 28 H 0.107 0.893 29 H 0.270 0.730 30 H 0.208 0.792 31 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.971 5.111 12.373 13.422 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.233 4.233 2 C -0.165 4.165 3 C 0.070 3.930 4 N -0.158 5.158 5 C -0.480 4.480 6 H 0.100 0.900 7 C -0.133 4.133 8 N -0.465 5.465 9 Si 0.728 3.272 10 H -0.193 1.193 11 H -0.212 1.212 12 H -0.197 1.197 13 C 0.323 3.677 14 O -0.412 6.412 15 C -0.174 4.174 16 C -0.041 4.041 17 C -0.161 4.161 18 N -0.076 5.076 19 N 0.006 4.994 20 N -0.224 5.224 21 H 0.293 0.707 22 C 0.003 3.997 23 C -0.215 4.215 24 C 0.186 3.814 25 F -0.084 7.084 26 H 0.224 0.776 27 H 0.093 0.907 28 H 0.124 0.876 29 H 0.080 0.920 30 H 0.223 0.777 31 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges -1.639 5.872 12.299 13.727 hybrid contribution 0.369 -1.946 0.050 1.981 sum -1.271 3.926 12.349 13.021 Atomic orbital electron populations 1.24579 0.95655 1.00267 1.02754 1.23186 0.94882 1.00260 0.98141 1.19397 0.83012 0.88382 1.02203 1.42842 1.49601 1.08912 1.14457 1.18835 0.91138 1.43871 0.94156 0.89977 1.25792 0.95027 0.94786 0.97694 1.69967 1.15717 1.36564 1.24242 0.86437 0.79055 0.82960 0.78704 1.19252 1.21165 1.19726 1.18086 0.79315 0.87090 0.83217 1.90697 1.52189 1.13196 1.85136 1.20519 1.06423 0.95296 0.95114 1.23017 0.89475 0.92476 0.99105 1.19932 1.09581 0.92423 0.94119 1.74834 1.11097 1.15784 1.05862 1.81547 1.14868 1.02725 1.00248 1.47604 1.52945 1.12341 1.09481 0.70713 1.18966 0.98377 0.93008 0.89318 1.19334 1.10105 0.93618 0.98434 1.17025 0.92293 0.79878 0.92199 1.91617 1.83191 1.36406 1.97139 0.77615 0.90668 0.87550 0.91964 0.77667 0.83577 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.21 -4.06 19.24 29.55 0.57 -3.49 16 2 C -0.16 -3.36 9.51 -37.12 -0.35 -3.71 16 3 C 0.19 3.94 5.10 -6.83 -0.03 3.91 16 4 N -0.44 -10.66 2.47 -128.71 -0.32 -10.98 16 5 C -0.35 -9.35 8.31 -15.00 -0.12 -9.47 16 6 H 0.08 2.14 7.95 -52.49 -0.42 1.73 16 7 C 0.08 2.08 5.46 -17.45 -0.10 1.99 16 8 N -0.83 -22.32 12.74 55.50 0.71 -21.62 16 9 Si 0.90 20.73 29.62 -169.99 -5.04 15.69 16 10 H -0.27 -6.43 7.11 56.52 0.40 -6.03 16 11 H -0.29 -6.45 7.11 56.52 0.40 -6.05 16 12 H -0.27 -5.98 7.11 56.52 0.40 -5.57 16 13 C 0.54 13.07 6.94 -12.49 -0.09 12.98 16 14 O -0.53 -14.94 15.69 5.26 0.08 -14.86 16 15 C -0.17 -3.25 5.83 -104.98 -0.61 -3.86 16 16 C -0.02 -0.34 7.28 -38.74 -0.28 -0.62 16 17 C -0.04 -0.60 7.26 -84.75 -0.61 -1.21 16 18 N -0.20 -3.09 12.40 32.15 0.40 -2.69 16 19 N -0.01 -0.17 13.82 60.35 0.83 0.67 16 20 N -0.50 -5.48 7.54 32.39 0.24 -5.24 16 21 H 0.45 2.89 8.96 -182.51 -1.64 1.26 16 22 C 0.13 1.71 7.34 -84.09 -0.62 1.10 16 23 C -0.19 -2.53 9.97 -39.83 -0.40 -2.93 16 24 C 0.21 3.62 7.20 -39.33 -0.28 3.34 16 25 F -0.11 -1.99 15.74 2.25 0.04 -1.95 16 26 H 0.21 3.14 7.80 -54.11 -0.42 2.72 16 27 H 0.08 1.32 5.39 -51.93 -0.28 1.04 16 28 H 0.11 2.22 7.90 -51.93 -0.41 1.81 16 29 H 0.27 6.93 8.31 -40.82 -0.34 6.59 16 30 H 0.21 3.69 1.79 -88.58 -0.16 3.53 16 31 H 0.15 1.40 8.06 -52.49 -0.42 0.98 16 LS Contribution 286.92 15.07 4.32 4.32 Total: -1.00 -32.11 286.92 -4.54 -36.65 By element: Atomic # 1 Polarization: 4.87 SS G_CDS: -2.88 Total: 1.99 kcal Atomic # 6 Polarization: 0.95 SS G_CDS: -2.93 Total: -1.98 kcal Atomic # 7 Polarization: -41.73 SS G_CDS: 1.87 Total: -39.86 kcal Atomic # 8 Polarization: -14.94 SS G_CDS: 0.08 Total: -14.86 kcal Atomic # 9 Polarization: -1.99 SS G_CDS: 0.04 Total: -1.95 kcal Atomic # 14 Polarization: 20.73 SS G_CDS: -5.04 Total: 15.69 kcal Total LS contribution 4.32 Total: 4.32 kcal Total: -32.11 -4.54 -36.65 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000799086370.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 181.280 kcal (2) G-P(sol) polarization free energy of solvation -32.109 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 149.171 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.541 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.650 kcal (6) G-S(sol) free energy of system = (1) + (5) 144.630 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds