Wall clock time and date at job start Tue Mar 31 2020 05:48:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 N 1.28432 * 125.19271 * 2 1 4 4 C 1.30850 * 111.00041 * 179.72912 * 3 2 1 5 5 C 1.39783 * 107.89418 * 0.45336 * 4 3 2 6 6 Cl 1.73599 * 127.34405 * 179.83126 * 5 4 3 7 7 C 1.36796 * 125.19348 * 180.02562 * 2 1 3 8 8 C 1.46870 * 126.91432 * 0.02642 * 7 2 1 9 9 O 1.21564 * 120.00287 * 179.97438 * 8 7 2 10 10 O 1.34839 * 119.99958 * 359.97227 * 8 7 2 11 11 C 1.45196 * 117.00260 * 180.02562 * 10 8 7 12 12 C 1.52998 * 109.47439 * 180.02562 * 11 10 8 13 13 O 1.42899 * 109.46702 * 64.99905 * 12 11 10 14 14 C 1.42908 * 113.99621 * 180.02562 * 13 12 11 15 15 C 1.50704 * 109.47009 * 180.02562 * 14 13 12 16 16 H 1.07997 * 119.99748 * 0.02562 * 15 14 13 17 17 C 1.37879 * 120.00153 * 180.02562 * 15 14 13 18 18 N 1.31520 * 119.99496 * 359.97438 * 17 15 14 19 19 Si 1.86793 * 120.00131 * 179.97438 * 17 15 14 20 20 H 1.48508 * 109.46923 * 60.00210 * 19 17 15 21 21 H 1.48505 * 109.47104 * 179.97438 * 19 17 15 22 22 H 1.48498 * 109.47353 * 299.99889 * 19 17 15 23 23 H 1.08996 * 109.47373 * 269.98629 * 1 2 3 24 24 H 1.08998 * 109.46735 * 29.98126 * 1 2 3 25 25 H 1.08998 * 109.47032 * 149.98151 * 1 2 3 26 26 H 1.07994 * 126.05614 * 180.30480 * 4 3 2 27 27 H 1.09007 * 109.47163 * 300.00137 * 11 10 8 28 28 H 1.09003 * 109.47003 * 59.99576 * 11 10 8 29 29 H 1.09000 * 109.47539 * 184.99974 * 12 11 10 30 30 H 1.09004 * 109.47021 * 305.00278 * 12 11 10 31 31 H 1.08996 * 109.47162 * 299.99700 * 14 13 12 32 32 H 1.08995 * 109.47153 * 60.00260 * 14 13 12 33 33 H 0.97001 * 119.99436 * 179.97438 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.2052 1.0496 0.0000 4 6 3.4737 0.7288 0.0058 5 6 3.5640 -0.6661 -0.0006 6 17 5.0093 -1.6278 -0.0010 7 6 2.2534 -1.1179 -0.0005 8 6 1.8022 -2.5156 -0.0017 9 8 2.6173 -3.4175 -0.0025 10 8 0.4838 -2.7984 -0.0018 11 6 0.1106 -4.2016 -0.0024 12 6 -1.4145 -4.3237 -0.0031 13 8 -1.9342 -3.7938 -1.2242 14 6 -3.3580 -3.8594 -1.3269 15 6 -3.7938 -3.2772 -2.6469 16 1 -3.0571 -2.8957 -3.3383 17 6 -5.1330 -3.2316 -2.9718 18 7 -6.0300 -3.6967 -2.1299 19 14 -5.6732 -2.5094 -4.6075 20 1 -5.0611 -3.2839 -5.7169 21 1 -7.1529 -2.5777 -4.7143 22 1 -5.2352 -1.0930 -4.6921 23 1 -0.3634 -0.0002 1.0276 24 1 -0.3633 0.8902 -0.5135 25 1 -0.3633 -0.8898 -0.5141 26 1 4.3040 1.4193 0.0117 27 1 0.5138 -4.6844 -0.8926 28 1 0.5138 -4.6852 0.8874 29 1 -1.6951 -5.3732 0.0860 30 1 -1.8241 -3.7654 0.8387 31 1 -3.6792 -4.8991 -1.2651 32 1 -3.8076 -3.2912 -0.5127 33 1 -6.9722 -3.6643 -2.3583 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000850318569.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:48:33 Heat of formation + Delta-G solvation = -57.296328 kcal Electronic energy + Delta-G solvation = -20226.540623 eV Core-core repulsion = 16701.831209 eV Total energy + Delta-G solvation = -3524.709414 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 288.071 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -42.88503 -40.19604 -37.23301 -36.76961 -36.15695 -33.57507 -32.85412 -31.40570 -30.06422 -27.34232 -27.04319 -24.48757 -22.51097 -22.04331 -21.96268 -20.62553 -18.44014 -17.13497 -16.99736 -16.51822 -16.21723 -15.97842 -15.32880 -14.86659 -14.69930 -14.47537 -14.27522 -13.65635 -13.34049 -13.04925 -12.91862 -12.54247 -12.12794 -12.02936 -11.88728 -11.53010 -11.07029 -10.94076 -10.85823 -10.76166 -10.62237 -10.53974 -10.14023 -9.62500 -9.23780 -9.04047 -8.98038 -8.31617 -6.19963 -4.22418 0.68901 1.62500 2.13795 2.32270 2.54924 2.68030 3.26375 3.29900 3.33188 4.22934 4.24655 4.31918 4.60153 4.70026 5.03101 5.08379 5.09847 5.16826 5.19531 5.33267 5.57636 5.73217 5.81891 5.83593 5.91535 6.25239 6.32414 6.94597 7.29216 7.47164 7.66298 7.69053 8.02923 8.40822 8.89490 9.42933 10.91366 Molecular weight = 288.07amu Principal moments of inertia in cm(-1) A = 0.022626 B = 0.003576 C = 0.003295 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1237.212102 B = 7827.143027 C = 8495.236432 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.077 3.923 2 N -0.248 5.248 3 N -0.253 5.253 4 C 0.011 3.989 5 C -0.084 4.084 6 Cl -0.005 7.005 7 C -0.010 4.010 8 C 0.536 3.464 9 O -0.480 6.480 10 O -0.341 6.341 11 C 0.076 3.924 12 C 0.061 3.939 13 O -0.392 6.392 14 C 0.195 3.805 15 C -0.518 4.518 16 H 0.066 0.934 17 C 0.058 3.942 18 N -0.898 5.898 19 Si 0.908 3.092 20 H -0.274 1.274 21 H -0.285 1.285 22 H -0.274 1.274 23 H 0.093 0.907 24 H 0.104 0.896 25 H 0.123 0.877 26 H 0.199 0.801 27 H 0.081 0.919 28 H 0.082 0.918 29 H 0.066 0.934 30 H 0.051 0.949 31 H 0.007 0.993 32 H 0.008 0.992 33 H 0.266 0.734 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 16.449 5.958 7.380 18.988 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 N -0.038 5.038 3 N -0.088 5.088 4 C -0.165 4.165 5 C -0.123 4.123 6 Cl 0.023 6.977 7 C -0.138 4.138 8 C 0.377 3.623 9 O -0.366 6.366 10 O -0.258 6.258 11 C 0.003 3.997 12 C -0.017 4.017 13 O -0.312 6.312 14 C 0.121 3.879 15 C -0.556 4.556 16 H 0.084 0.916 17 C -0.143 4.143 18 N -0.537 5.537 19 Si 0.735 3.265 20 H -0.200 1.200 21 H -0.211 1.211 22 H -0.200 1.200 23 H 0.111 0.889 24 H 0.122 0.878 25 H 0.141 0.859 26 H 0.215 0.785 27 H 0.100 0.900 28 H 0.100 0.900 29 H 0.084 0.916 30 H 0.069 0.931 31 H 0.024 0.976 32 H 0.025 0.975 33 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges 15.790 6.482 7.249 18.544 hybrid contribution 0.039 -0.671 -0.562 0.876 sum 15.829 5.811 6.687 18.140 Atomic orbital electron populations 1.22668 0.70412 1.07505 1.05591 1.45835 1.08570 1.01465 1.47947 1.73304 1.03305 1.13703 1.18467 1.23557 0.94077 0.92401 1.06440 1.21310 0.87464 0.92635 1.10849 1.98371 1.32174 1.70304 1.96822 1.20299 0.90452 0.87060 1.15952 1.19431 0.81846 0.86889 0.74097 1.90927 1.54686 1.46028 1.44910 1.86635 1.23903 1.31695 1.83527 1.23336 0.95855 0.77453 1.03099 1.22344 0.90158 0.98680 0.90499 1.87914 1.25820 1.82623 1.34854 1.20241 0.74081 0.96040 0.97529 1.20991 0.92111 1.40509 1.02029 0.91575 1.24939 0.96122 0.95463 0.97818 1.69947 1.01610 1.46094 1.36021 0.86394 0.77309 0.79689 0.83090 1.19973 1.21097 1.19964 0.88883 0.87765 0.85918 0.78455 0.90019 0.89952 0.91602 0.93100 0.97566 0.97461 0.92491 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 0.83 10.81 59.85 0.65 1.48 16 2 N -0.25 -3.15 3.75 -63.87 -0.24 -3.39 16 3 N -0.25 -3.12 11.89 30.61 0.36 -2.76 16 4 C 0.01 0.11 12.03 -17.39 -0.21 -0.09 16 5 C -0.08 -1.06 6.88 -38.86 -0.27 -1.33 16 6 Cl -0.01 -0.06 28.13 -51.86 -1.46 -1.52 16 7 C -0.01 -0.15 6.96 -82.02 -0.57 -0.72 16 8 C 0.54 8.03 7.93 34.22 0.27 8.30 16 9 O -0.48 -7.85 15.63 -19.31 -0.30 -8.15 16 10 O -0.34 -5.11 7.66 -43.66 -0.33 -5.44 16 11 C 0.08 1.08 5.86 37.16 0.22 1.30 16 12 C 0.06 1.00 6.33 37.16 0.24 1.23 16 13 O -0.39 -8.73 10.30 -38.81 -0.40 -9.13 16 14 C 0.20 5.03 5.69 36.01 0.20 5.23 16 15 C -0.52 -14.60 9.43 -34.44 -0.32 -14.92 16 16 H 0.07 1.85 7.81 -52.49 -0.41 1.44 16 17 C 0.06 1.62 5.46 -17.82 -0.10 1.52 16 18 N -0.90 -25.92 13.29 55.43 0.74 -25.18 16 19 Si 0.91 21.15 29.54 -169.99 -5.02 16.13 16 20 H -0.27 -6.31 7.11 56.52 0.40 -5.91 16 21 H -0.29 -6.52 7.11 56.52 0.40 -6.12 16 22 H -0.27 -6.25 7.11 56.52 0.40 -5.85 16 23 H 0.09 0.84 8.14 -51.93 -0.42 0.42 16 24 H 0.10 0.96 8.14 -51.93 -0.42 0.54 16 25 H 0.12 1.55 6.15 -51.93 -0.32 1.23 16 26 H 0.20 1.39 8.06 -52.49 -0.42 0.97 16 27 H 0.08 1.20 8.14 -51.92 -0.42 0.78 16 28 H 0.08 0.97 8.14 -51.93 -0.42 0.54 16 29 H 0.07 0.99 8.14 -51.93 -0.42 0.56 16 30 H 0.05 0.79 8.14 -51.93 -0.42 0.36 16 31 H 0.01 0.17 8.14 -51.93 -0.42 -0.25 16 32 H 0.01 0.20 8.14 -51.93 -0.42 -0.22 16 33 H 0.27 7.21 8.31 -40.82 -0.34 6.87 16 LS Contribution 314.34 15.07 4.74 4.74 Total: -1.00 -31.87 314.34 -5.48 -37.35 By element: Atomic # 1 Polarization: -0.96 SS G_CDS: -3.67 Total: -4.63 kcal Atomic # 6 Polarization: 1.89 SS G_CDS: 0.11 Total: 2.00 kcal Atomic # 7 Polarization: -32.20 SS G_CDS: 0.86 Total: -31.33 kcal Atomic # 8 Polarization: -21.69 SS G_CDS: -1.04 Total: -22.72 kcal Atomic # 14 Polarization: 21.15 SS G_CDS: -5.02 Total: 16.13 kcal Atomic # 17 Polarization: -0.06 SS G_CDS: -1.46 Total: -1.52 kcal Total LS contribution 4.74 Total: 4.74 kcal Total: -31.87 -5.48 -37.35 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000850318569.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.947 kcal (2) G-P(sol) polarization free energy of solvation -31.869 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.816 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.480 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.349 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.296 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds