Wall clock time and date at job start Tue Mar 31 2020 05:48:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34732 * 117.00353 * 2 1 4 4 O 1.21490 * 120.00036 * 0.02562 * 3 2 1 5 5 C 1.47591 * 120.00068 * 179.97438 * 3 2 1 6 6 C 1.41103 * 125.99073 * 180.02562 * 5 3 2 7 7 C 1.35572 * 107.80344 * 179.97438 * 6 5 3 8 8 O 1.35763 * 126.08177 * 179.97438 * 7 6 5 9 9 C 1.42900 * 117.00100 * 359.31475 * 8 7 6 10 10 H 1.09005 * 109.46882 * 23.61141 * 9 8 7 11 11 C 1.50703 * 109.47607 * 143.60788 * 9 8 7 12 12 H 1.07998 * 119.99563 * 1.81300 * 11 9 8 13 13 C 1.37867 * 120.00053 * 181.81102 * 11 9 8 14 14 N 1.31520 * 119.99894 * 196.03483 * 13 11 9 15 15 Si 1.86797 * 120.00322 * 16.03780 * 13 11 9 16 16 H 1.48505 * 109.47307 * 87.32572 * 15 13 11 17 17 H 1.48494 * 109.47312 * 207.32723 * 15 13 11 18 18 H 1.48500 * 109.46849 * 327.32995 * 15 13 11 19 19 C 1.52999 * 109.47108 * 263.61353 * 9 8 7 20 20 Cl 1.80295 * 109.47173 * 64.57088 * 19 9 8 21 21 N 1.35854 * 107.83892 * 0.26313 * 7 6 5 22 22 C 1.46496 * 125.94445 * 179.72248 * 21 7 6 23 23 N 1.31915 * 125.98992 * 359.97438 * 5 3 2 24 24 H 1.09001 * 109.46945 * 59.99995 * 1 2 3 25 25 H 1.08994 * 109.47296 * 179.97438 * 1 2 3 26 26 H 1.08996 * 109.46870 * 299.99969 * 1 2 3 27 27 H 1.08008 * 126.09736 * 0.02562 * 6 5 3 28 28 H 0.97001 * 120.00164 * 180.02562 * 14 13 11 29 29 H 1.09004 * 109.47298 * 184.57119 * 19 9 8 30 30 H 1.09004 * 109.46893 * 304.56992 * 19 9 8 31 31 H 1.09004 * 109.47779 * 94.95539 * 22 21 7 32 32 H 1.09004 * 109.47630 * 214.95781 * 22 21 7 33 33 H 1.09006 * 109.47282 * 334.95772 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0637 1.2004 0.0000 4 8 1.4021 2.2194 0.0005 5 6 3.5376 1.2776 0.0006 6 6 4.3060 2.4611 0.0011 7 6 5.6143 2.1058 0.0021 8 8 6.6735 2.9552 0.0024 9 6 6.3831 4.3543 -0.0136 10 1 5.3839 4.5226 0.3883 11 6 7.3940 5.0870 0.8305 12 1 8.1968 4.5427 1.3055 13 6 7.2939 6.4520 0.9963 14 7 8.3201 7.1359 1.4533 15 14 5.7007 7.3301 0.5720 16 1 4.7973 7.3137 1.7505 17 1 5.9957 8.7356 0.1940 18 1 5.0426 6.6392 -0.5659 19 6 6.4482 4.8722 -1.4518 20 17 5.1497 4.0933 -2.4304 21 7 5.6771 0.7488 -0.0038 22 6 6.9016 -0.0554 -0.0107 23 7 4.3676 0.2522 0.0016 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3633 -1.0276 -0.0005 26 1 -0.3633 0.5138 0.8900 27 1 3.9205 3.4700 0.0016 28 1 8.2496 8.0962 1.5703 29 1 6.3071 5.9531 -1.4555 30 1 7.4208 4.6313 -1.8810 31 1 7.1597 -0.3334 1.0112 32 1 6.7414 -0.9564 -0.6028 33 1 7.7152 0.5252 -0.4456 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001226424174.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:48:37 Heat of formation + Delta-G solvation = -39.186239 kcal Electronic energy + Delta-G solvation = -20927.583593 eV Core-core repulsion = 17403.659491 eV Total energy + Delta-G solvation = -3523.924102 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 288.071 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -41.21426 -39.97607 -37.96855 -36.36891 -35.22660 -33.54261 -33.06429 -30.62263 -29.12066 -28.17164 -26.70927 -25.33282 -23.55407 -22.14373 -20.37433 -19.73464 -18.36726 -17.11233 -16.85674 -16.43367 -16.18803 -15.82463 -15.55412 -14.61412 -14.20523 -14.05745 -13.59077 -13.38394 -13.36466 -13.24149 -12.73837 -12.51510 -12.31554 -12.15603 -11.82249 -11.36527 -11.07973 -10.88466 -10.81194 -10.77495 -10.63419 -10.21906 -10.03163 -9.67315 -9.48872 -8.91516 -8.83848 -7.84567 -6.55095 -4.57268 1.32939 2.13664 2.49393 2.70263 2.93597 3.03581 3.11313 3.19000 3.37821 3.90120 4.02018 4.53224 4.75630 5.03540 5.04239 5.11630 5.32947 5.40968 5.49026 5.58909 5.64913 5.75333 5.77638 5.82294 6.07400 6.29664 6.49874 6.66755 6.77984 7.01599 7.40979 7.76632 7.89968 8.15893 8.57766 9.01318 10.55439 Molecular weight = 288.07amu Principal moments of inertia in cm(-1) A = 0.018034 B = 0.005724 C = 0.005115 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1552.280645 B = 4890.503534 C = 5472.251010 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.036 3.964 2 O -0.346 6.346 3 C 0.555 3.445 4 O -0.491 6.491 5 C 0.061 3.939 6 C -0.284 4.284 7 C 0.311 3.689 8 O -0.289 6.289 9 C 0.204 3.796 10 H 0.048 0.952 11 C -0.539 4.539 12 H 0.093 0.907 13 C 0.090 3.910 14 N -0.864 5.864 15 Si 0.846 3.154 16 H -0.265 1.265 17 H -0.276 1.276 18 H -0.245 1.245 19 C -0.053 4.053 20 Cl -0.220 7.220 21 N -0.359 5.359 22 C 0.104 3.896 23 N -0.241 5.241 24 H 0.063 0.937 25 H 0.102 0.898 26 H 0.064 0.936 27 H 0.161 0.839 28 H 0.275 0.725 29 H 0.104 0.896 30 H 0.097 0.903 31 H 0.076 0.924 32 H 0.088 0.912 33 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.726 -11.160 -3.972 14.143 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.058 4.058 2 O -0.261 6.261 3 C 0.396 3.604 4 O -0.375 6.375 5 C -0.103 4.103 6 C -0.314 4.314 7 C 0.141 3.859 8 O -0.195 6.195 9 C 0.148 3.852 10 H 0.065 0.935 11 C -0.575 4.575 12 H 0.111 0.889 13 C -0.117 4.117 14 N -0.498 5.498 15 Si 0.671 3.329 16 H -0.190 1.190 17 H -0.201 1.201 18 H -0.170 1.170 19 C -0.116 4.116 20 Cl -0.194 7.194 21 N -0.154 5.154 22 C -0.037 4.037 23 N -0.074 5.074 24 H 0.082 0.918 25 H 0.120 0.880 26 H 0.083 0.917 27 H 0.178 0.822 28 H 0.085 0.915 29 H 0.122 0.878 30 H 0.115 0.885 31 H 0.095 0.905 32 H 0.106 0.894 33 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -7.520 -11.960 -3.982 14.678 hybrid contribution -1.008 1.655 -0.225 1.951 sum -8.528 -10.305 -4.207 14.022 Atomic orbital electron populations 1.23299 0.76149 1.03693 1.02680 1.86647 1.23249 1.32143 1.84095 1.19716 0.86466 0.81546 0.72649 1.90866 1.65468 1.36048 1.45157 1.20389 0.90351 0.92800 1.06716 1.20833 0.89873 0.99345 1.21320 1.18979 0.88345 0.83159 0.95462 1.85918 1.27602 1.18847 1.87167 1.20806 0.99747 0.73200 0.91448 0.93469 1.20631 1.13287 0.92355 1.31277 0.88876 1.24743 0.96226 0.96452 0.94270 1.69895 1.28696 1.08289 1.42890 0.87482 0.84596 0.80107 0.80739 1.18998 1.20098 1.16970 1.26298 0.91349 1.00393 0.93574 1.98683 1.59209 1.84865 1.76627 1.48469 1.05899 1.02082 1.58959 1.21921 0.82156 0.95965 1.03674 1.77794 0.85505 1.19488 1.24562 0.91787 0.87996 0.91736 0.82160 0.91503 0.87824 0.88493 0.90509 0.89368 0.88625 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.36 10.57 101.05 1.07 1.42 16 2 O -0.35 -5.04 10.57 -40.58 -0.43 -5.47 16 3 C 0.55 9.59 7.97 34.55 0.28 9.87 16 4 O -0.49 -9.25 16.69 -19.26 -0.32 -9.57 16 5 C 0.06 1.12 7.12 -82.93 -0.59 0.53 16 6 C -0.28 -5.59 7.84 -39.45 -0.31 -5.90 16 7 C 0.31 6.03 7.03 -16.72 -0.12 5.91 16 8 O -0.29 -6.04 9.62 -19.00 -0.18 -6.22 16 9 C 0.20 4.50 1.79 -27.88 -0.05 4.45 16 10 H 0.05 1.06 4.89 -51.93 -0.25 0.81 16 11 C -0.54 -13.70 9.35 -34.44 -0.32 -14.03 16 12 H 0.09 2.60 8.06 -52.49 -0.42 2.18 16 13 C 0.09 2.31 5.32 -17.82 -0.09 2.21 16 14 N -0.86 -23.57 13.96 55.43 0.77 -22.80 16 15 Si 0.85 18.66 25.82 -169.99 -4.39 14.28 16 16 H -0.26 -5.92 7.11 56.52 0.40 -5.52 16 17 H -0.28 -6.03 7.11 56.52 0.40 -5.62 16 18 H -0.25 -5.08 5.34 56.52 0.30 -4.78 16 19 C -0.05 -1.07 5.61 37.16 0.21 -0.87 16 20 Cl -0.22 -4.20 26.34 -51.86 -1.37 -5.57 16 21 N -0.36 -6.12 4.03 -68.19 -0.28 -6.39 16 22 C 0.10 1.25 11.44 59.84 0.68 1.94 16 23 N -0.24 -4.28 12.61 33.33 0.42 -3.86 16 24 H 0.06 0.62 8.14 -51.93 -0.42 0.19 16 25 H 0.10 0.69 8.14 -51.93 -0.42 0.27 16 26 H 0.06 0.62 8.14 -51.93 -0.42 0.20 16 27 H 0.16 3.27 6.48 -52.48 -0.34 2.93 16 28 H 0.27 6.97 8.31 -40.82 -0.34 6.63 16 29 H 0.10 2.10 4.50 -51.93 -0.23 1.86 16 30 H 0.10 1.86 8.14 -51.93 -0.42 1.44 16 31 H 0.08 0.81 8.14 -51.93 -0.42 0.39 16 32 H 0.09 0.86 8.14 -51.93 -0.42 0.44 16 33 H 0.10 1.10 8.04 -51.93 -0.42 0.69 16 LS Contribution 302.32 15.07 4.56 4.56 Total: -1.00 -29.50 302.32 -3.90 -33.40 By element: Atomic # 1 Polarization: 5.54 SS G_CDS: -3.44 Total: 2.10 kcal Atomic # 6 Polarization: 4.80 SS G_CDS: 0.75 Total: 5.55 kcal Atomic # 7 Polarization: -33.98 SS G_CDS: 0.92 Total: -33.06 kcal Atomic # 8 Polarization: -20.33 SS G_CDS: -0.93 Total: -21.26 kcal Atomic # 14 Polarization: 18.66 SS G_CDS: -4.39 Total: 14.28 kcal Atomic # 17 Polarization: -4.20 SS G_CDS: -1.37 Total: -5.57 kcal Total LS contribution 4.56 Total: 4.56 kcal Total: -29.50 -3.90 -33.40 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001226424174.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -5.790 kcal (2) G-P(sol) polarization free energy of solvation -29.498 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -35.287 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.899 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.396 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.186 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds