Wall clock time and date at job start Tue Mar 31 2020 05:48:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45191 * 1 3 3 C 1.34826 * 117.00326 * 2 1 4 4 O 1.21543 * 119.99470 * 359.97438 * 3 2 1 5 5 C 1.47012 * 120.00066 * 180.02562 * 3 2 1 6 6 C 1.38067 * 126.44424 * 180.02562 * 5 3 2 7 7 C 1.39651 * 107.63341 * 179.97438 * 6 5 3 8 8 O 1.36007 * 125.66463 * 179.97438 * 7 6 5 9 9 C 1.42894 * 117.00237 * 179.97438 * 8 7 6 10 10 H 1.09000 * 109.47628 * 29.99715 * 9 8 7 11 11 C 1.50702 * 109.47457 * 150.00139 * 9 8 7 12 12 H 1.08002 * 119.99446 * 359.97438 * 11 9 8 13 13 C 1.37871 * 120.00072 * 180.02562 * 11 9 8 14 14 N 1.31516 * 119.99826 * 179.72119 * 13 11 9 15 15 Si 1.86800 * 120.00406 * 359.97438 * 13 11 9 16 16 H 1.48501 * 109.46758 * 269.72576 * 15 13 11 17 17 H 1.48499 * 109.47026 * 29.72423 * 15 13 11 18 18 H 1.48496 * 109.47474 * 149.72459 * 15 13 11 19 19 C 1.53009 * 109.47058 * 270.00055 * 9 8 7 20 20 Cl 1.80292 * 109.46912 * 65.00006 * 19 9 8 21 21 N 1.31239 * 108.67531 * 0.22247 * 7 6 5 22 22 N 1.36722 * 126.44745 * 0.02562 * 5 3 2 23 23 C 1.46495 * 126.10167 * 0.03339 * 22 5 3 24 24 H 1.09007 * 109.47390 * 300.00295 * 1 2 3 25 25 H 1.09001 * 109.47410 * 59.99845 * 1 2 3 26 26 H 1.08998 * 109.47572 * 180.02562 * 1 2 3 27 27 H 1.07993 * 126.18272 * 0.02562 * 6 5 3 28 28 H 0.96999 * 120.00128 * 180.27192 * 14 13 11 29 29 H 1.09000 * 109.46749 * 185.00033 * 19 9 8 30 30 H 1.09000 * 109.46793 * 304.99965 * 19 9 8 31 31 H 1.09009 * 109.46751 * 89.99992 * 23 22 5 32 32 H 1.08991 * 109.47709 * 210.00262 * 23 22 5 33 33 H 1.09004 * 109.47614 * 330.00739 * 23 22 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0641 1.2013 0.0000 4 8 1.4021 2.2206 -0.0005 5 6 3.5322 1.2781 -0.0006 6 6 4.2932 2.4302 -0.0001 7 6 5.6368 2.0496 -0.0004 8 8 6.7009 2.8967 -0.0006 9 6 8.0014 2.3047 -0.0002 10 1 7.9635 1.3439 -0.5136 11 6 8.9686 3.2161 -0.7108 12 1 8.6243 4.1536 -1.1220 13 6 10.2925 2.8528 -0.8369 14 7 11.1354 3.6457 -1.4619 15 14 10.8879 1.2310 -0.1264 16 1 11.3423 1.4403 1.2718 17 1 9.7771 0.2456 -0.1436 18 1 12.0174 0.7179 -0.9424 19 6 8.4655 2.0939 1.4425 20 17 7.3930 0.8897 2.2488 21 7 5.7023 0.7389 -0.0057 22 7 4.4008 0.2223 -0.0016 23 6 4.0352 -1.1963 -0.0031 24 1 -0.3634 0.5139 0.8900 25 1 -0.3634 0.5139 -0.8900 26 1 -0.3634 -1.0276 0.0005 27 1 3.9172 3.4426 0.0011 28 1 12.0660 3.3883 -1.5541 29 1 9.4913 1.7254 1.4440 30 1 8.4186 3.0404 1.9811 31 1 3.9445 -1.5470 -1.0312 32 1 4.8062 -1.7708 0.5102 33 1 3.0826 -1.3266 0.5105 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001231362189.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:48:38 Heat of formation + Delta-G solvation = -36.169909 kcal Electronic energy + Delta-G solvation = -20840.844388 eV Core-core repulsion = 17317.051085 eV Total energy + Delta-G solvation = -3523.793304 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 288.071 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -41.25159 -40.06233 -37.81316 -36.70404 -35.13318 -33.46599 -32.40898 -30.55318 -30.34691 -28.01363 -26.30493 -25.17750 -23.77084 -22.10040 -20.47877 -19.93866 -18.21727 -17.12935 -17.04746 -16.74665 -16.13253 -15.56083 -15.37649 -15.02048 -14.36720 -13.91590 -13.55753 -13.50831 -13.37416 -13.25550 -12.89552 -12.65008 -12.41884 -12.19945 -11.91975 -11.28074 -11.11731 -11.08080 -10.89402 -10.73572 -10.33478 -10.10733 -9.87395 -9.54521 -9.35673 -8.91507 -8.65897 -7.98257 -6.40281 -4.45308 0.93943 2.24411 2.49462 2.67484 2.99591 3.03572 3.20462 3.20872 3.21816 3.92740 4.09007 4.49297 4.69953 4.80659 4.88682 4.89731 5.19123 5.24904 5.45838 5.51138 5.56086 5.69041 5.81086 5.96981 5.99853 6.00490 6.33936 6.73675 6.91628 7.14642 7.42903 7.74391 7.96936 8.35054 8.70999 9.13836 10.70933 Molecular weight = 288.07amu Principal moments of inertia in cm(-1) A = 0.029256 B = 0.004653 C = 0.004401 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 956.843940 B = 6015.771545 C = 6360.193068 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.036 3.964 2 O -0.358 6.358 3 C 0.542 3.458 4 O -0.488 6.488 5 C 0.041 3.959 6 C -0.180 4.180 7 C 0.268 3.732 8 O -0.271 6.271 9 C 0.191 3.809 10 H 0.055 0.945 11 C -0.527 4.527 12 H 0.095 0.905 13 C 0.084 3.916 14 N -0.876 5.876 15 Si 0.860 3.140 16 H -0.269 1.269 17 H -0.252 1.252 18 H -0.281 1.281 19 C -0.054 4.054 20 Cl -0.214 7.214 21 N -0.281 5.281 22 N -0.343 5.343 23 C 0.105 3.895 24 H 0.065 0.935 25 H 0.066 0.934 26 H 0.103 0.897 27 H 0.165 0.835 28 H 0.273 0.727 29 H 0.086 0.914 30 H 0.098 0.902 31 H 0.075 0.925 32 H 0.090 0.910 33 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -16.494 -10.260 4.038 19.840 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 O -0.275 6.275 3 C 0.384 3.616 4 O -0.373 6.373 5 C -0.085 4.085 6 C -0.212 4.212 7 C 0.066 3.934 8 O -0.174 6.174 9 C 0.134 3.866 10 H 0.073 0.927 11 C -0.564 4.564 12 H 0.113 0.887 13 C -0.121 4.121 14 N -0.511 5.511 15 Si 0.687 3.313 16 H -0.196 1.196 17 H -0.176 1.176 18 H -0.208 1.208 19 C -0.116 4.116 20 Cl -0.188 7.188 21 N -0.124 5.124 22 N -0.133 5.133 23 C -0.036 4.036 24 H 0.084 0.916 25 H 0.084 0.916 26 H 0.122 0.878 27 H 0.182 0.818 28 H 0.083 0.917 29 H 0.104 0.896 30 H 0.116 0.884 31 H 0.094 0.906 32 H 0.109 0.891 33 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -15.837 -10.781 4.016 19.574 hybrid contribution -0.038 -0.305 0.493 0.581 sum -15.875 -11.086 4.508 19.880 Atomic orbital electron populations 1.23322 0.75560 1.03898 1.02934 1.86592 1.23991 1.32297 1.84613 1.19825 0.86722 0.81848 0.73196 1.90900 1.65413 1.35783 1.45183 1.19880 0.87371 0.89082 1.12211 1.21020 0.89241 0.98501 1.12450 1.20333 0.89133 0.87948 0.95993 1.86420 1.13222 1.30052 1.87689 1.20808 0.78312 0.97060 0.90381 0.92729 1.20749 0.91975 1.07506 1.36175 0.88713 1.24779 0.96016 0.96769 0.94563 1.69811 1.04564 1.36524 1.40232 0.87227 0.80007 0.84877 0.79169 1.19555 1.17617 1.20755 1.26133 0.94983 0.92878 0.97619 1.98665 1.71740 1.64753 1.83655 1.77794 0.96956 1.09574 1.28097 1.48470 1.02465 1.05715 1.56624 1.21986 1.02192 0.75829 1.03593 0.91602 0.91550 0.87819 0.81794 0.91667 0.89583 0.88370 0.90629 0.89137 0.88632 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.25 10.57 101.05 1.07 1.32 16 2 O -0.36 -3.70 8.06 -40.84 -0.33 -4.03 16 3 C 0.54 7.39 7.94 34.29 0.27 7.66 16 4 O -0.49 -7.55 16.69 -19.30 -0.32 -7.88 16 5 C 0.04 0.65 6.95 -82.19 -0.57 0.08 16 6 C -0.18 -3.18 10.63 -39.12 -0.42 -3.60 16 7 C 0.27 5.49 6.88 -17.28 -0.12 5.37 16 8 O -0.27 -6.25 9.83 -19.76 -0.19 -6.44 16 9 C 0.19 4.59 1.88 -27.88 -0.05 4.54 16 10 H 0.06 1.37 6.33 -51.93 -0.33 1.04 16 11 C -0.53 -14.40 9.47 -34.44 -0.33 -14.72 16 12 H 0.09 2.82 8.06 -52.49 -0.42 2.40 16 13 C 0.08 2.29 5.45 -17.82 -0.10 2.19 16 14 N -0.88 -25.23 13.96 55.43 0.77 -24.45 16 15 Si 0.86 20.10 24.41 -169.99 -4.15 15.95 16 16 H -0.27 -6.02 6.84 56.52 0.39 -5.64 16 17 H -0.25 -5.78 6.52 56.52 0.37 -5.42 16 18 H -0.28 -6.52 7.11 56.52 0.40 -6.11 16 19 C -0.05 -1.17 5.83 37.16 0.22 -0.95 16 20 Cl -0.21 -4.29 26.14 -51.86 -1.36 -5.65 16 21 N -0.28 -5.50 9.50 30.45 0.29 -5.21 16 22 N -0.34 -5.38 4.06 -63.99 -0.26 -5.64 16 23 C 0.10 1.12 10.95 59.84 0.66 1.77 16 24 H 0.07 0.45 8.14 -51.93 -0.42 0.02 16 25 H 0.07 0.45 8.14 -51.93 -0.42 0.03 16 26 H 0.10 0.39 8.14 -51.93 -0.42 -0.03 16 27 H 0.16 2.64 8.06 -52.49 -0.42 2.22 16 28 H 0.27 7.29 8.31 -40.82 -0.34 6.95 16 29 H 0.09 1.91 3.23 -51.93 -0.17 1.75 16 30 H 0.10 2.05 8.14 -51.93 -0.42 1.63 16 31 H 0.08 0.69 8.14 -51.92 -0.42 0.27 16 32 H 0.09 0.93 8.14 -51.93 -0.42 0.50 16 33 H 0.10 0.83 6.20 -51.93 -0.32 0.51 16 LS Contribution 298.68 15.07 4.50 4.50 Total: -1.00 -31.29 298.68 -3.80 -35.09 By element: Atomic # 1 Polarization: 3.49 SS G_CDS: -3.38 Total: 0.11 kcal Atomic # 6 Polarization: 3.02 SS G_CDS: 0.63 Total: 3.65 kcal Atomic # 7 Polarization: -36.11 SS G_CDS: 0.80 Total: -35.30 kcal Atomic # 8 Polarization: -17.50 SS G_CDS: -0.85 Total: -18.35 kcal Atomic # 14 Polarization: 20.10 SS G_CDS: -4.15 Total: 15.95 kcal Atomic # 17 Polarization: -4.29 SS G_CDS: -1.36 Total: -5.65 kcal Total LS contribution 4.50 Total: 4.50 kcal Total: -31.29 -3.80 -35.09 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001231362189.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -1.082 kcal (2) G-P(sol) polarization free energy of solvation -31.288 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.370 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.800 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.088 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.170 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds