Wall clock time and date at job start Tue Mar 31 2020 05:49:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42892 * 1 3 3 C 1.35866 * 117.00076 * 2 1 4 4 C 1.38579 * 120.10345 * 0.03251 * 3 2 1 5 5 C 1.38171 * 120.07659 * 179.97438 * 4 3 2 6 6 C 1.38494 * 120.28995 * 359.97312 * 5 4 3 7 7 Cl 1.73603 * 119.89410 * 180.02562 * 6 5 4 8 8 C 1.38110 * 120.20738 * 359.76379 * 6 5 4 9 9 C 1.39296 * 119.91969 * 0.51452 * 8 6 5 10 10 C 1.48343 * 120.13946 * 179.74160 * 9 8 6 11 11 C 1.39762 * 120.00517 * 129.97390 * 10 9 8 12 12 C 1.38379 * 120.37812 * 180.25715 * 11 10 9 13 13 C 1.37719 * 120.38047 * 359.74768 * 12 11 10 14 14 C 1.40759 * 120.00072 * 0.02562 * 13 12 11 15 15 C 1.41416 * 120.19042 * 180.02562 * 14 13 12 16 16 H 1.08001 * 120.00059 * 150.17215 * 15 14 13 17 17 C 1.39928 * 120.00259 * 330.17951 * 15 14 13 18 18 N 1.30829 * 120.00745 * 161.73171 * 17 15 14 19 19 Si 1.86811 * 119.99463 * 341.72803 * 17 15 14 20 20 H 1.48501 * 109.46861 * 95.41722 * 19 17 15 21 21 H 1.48499 * 109.46544 * 215.41316 * 19 17 15 22 22 H 1.48490 * 109.47048 * 335.41573 * 19 17 15 23 23 C 1.38756 * 120.00352 * 309.72632 * 10 9 8 24 24 H 1.09002 * 109.46991 * 299.99276 * 1 2 3 25 25 H 1.08995 * 109.47471 * 59.99970 * 1 2 3 26 26 H 1.09006 * 109.46758 * 179.97438 * 1 2 3 27 27 H 1.08001 * 119.96032 * 359.97438 * 4 3 2 28 28 H 1.08003 * 119.85696 * 179.97438 * 5 4 3 29 29 H 1.07999 * 120.03654 * 180.25929 * 8 6 5 30 30 H 1.08000 * 119.80725 * 359.97438 * 11 10 9 31 31 H 1.08005 * 119.80625 * 179.72908 * 12 11 10 32 32 H 1.08007 * 120.00295 * 179.97438 * 13 12 11 33 33 H 0.96988 * 120.00284 * 180.02562 * 18 17 15 34 34 H 1.07999 * 120.19019 * 0.02562 * 23 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0458 1.2106 0.0000 4 6 1.2931 2.3742 0.0007 5 6 1.9210 3.6050 0.0012 6 6 3.3037 3.6838 0.0016 7 17 4.0819 5.2356 0.0030 8 6 4.0654 2.5317 0.0064 9 6 3.4415 1.2863 0.0000 10 6 4.2548 0.0457 -0.0006 11 6 3.9841 -0.9680 0.9226 12 6 4.7414 -2.1261 0.9324 13 6 5.7671 -2.2953 0.0290 14 6 6.0506 -1.2866 -0.9109 15 6 7.1026 -1.4563 -1.8407 16 1 7.0455 -0.9878 -2.8122 17 6 8.2174 -2.2312 -1.5022 18 7 9.0066 -2.6872 -2.4407 19 14 8.5788 -2.6146 0.2901 20 1 8.0062 -3.9399 0.6379 21 1 10.0481 -2.6384 0.5045 22 1 7.9696 -1.5704 1.1522 23 6 5.2812 -0.1105 -0.9212 24 1 -0.3633 0.5137 0.8901 25 1 -0.3634 0.5138 -0.8899 26 1 -0.3633 -1.0277 -0.0005 27 1 0.2145 2.3188 0.0008 28 1 1.3309 4.5096 0.0013 29 1 5.1434 2.5964 0.0110 30 1 3.1823 -0.8448 1.6355 31 1 4.5270 -2.9018 1.6527 32 1 6.3546 -3.2015 0.0423 33 1 9.7791 -3.2246 -2.2060 34 1 5.4909 0.6693 -1.6384 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001245813689.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:49:24 Heat of formation + Delta-G solvation = -6.492498 kcal Electronic energy + Delta-G solvation = -19536.559949 eV Core-core repulsion = 16424.902818 eV Total energy + Delta-G solvation = -3111.657131 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 288.066 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -40.16416 -37.81902 -37.37431 -36.03001 -33.71778 -32.11042 -30.37353 -29.83243 -28.56052 -27.11998 -25.12817 -23.16365 -22.06803 -20.62073 -20.41044 -18.14698 -17.26955 -16.20135 -16.05202 -15.70298 -15.60384 -14.60823 -14.47232 -13.95522 -13.73732 -13.63826 -13.18353 -12.74671 -12.68460 -12.27184 -12.04616 -11.87837 -11.77799 -11.50747 -11.26816 -10.95271 -10.67419 -10.63072 -10.59669 -10.27795 -9.82316 -9.60622 -9.20189 -8.90301 -8.12701 -7.65973 -7.32227 -6.91371 -4.45959 1.21054 1.33523 2.24188 2.62635 2.65023 3.13097 3.23690 3.33711 3.37813 3.74549 4.00954 4.51024 4.73467 4.83830 5.04223 5.11712 5.23218 5.33024 5.43462 5.45598 5.65724 5.93917 5.99643 6.14709 6.21954 6.30512 6.35091 6.50600 6.67724 6.79422 6.93370 7.14665 7.39120 7.47556 7.61900 7.75330 7.87837 8.09379 8.37975 8.66128 8.82914 10.11492 Molecular weight = 288.07amu Principal moments of inertia in cm(-1) A = 0.016877 B = 0.005029 C = 0.004182 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1658.710159 B = 5566.229343 C = 6694.498479 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.293 6.293 3 C 0.139 3.861 4 C -0.202 4.202 5 C -0.084 4.084 6 C -0.069 4.069 7 Cl -0.080 7.080 8 C -0.065 4.065 9 C -0.036 4.036 10 C -0.024 4.024 11 C -0.204 4.204 12 C -0.083 4.083 13 C -0.230 4.230 14 C 0.090 3.910 15 C -0.451 4.451 16 H 0.090 0.910 17 C 0.085 3.915 18 N -0.811 5.811 19 Si 0.909 3.091 20 H -0.271 1.271 21 H -0.291 1.291 22 H -0.244 1.244 23 C -0.185 4.185 24 H 0.052 0.948 25 H 0.053 0.947 26 H 0.099 0.901 27 H 0.134 0.866 28 H 0.130 0.870 29 H 0.143 0.857 30 H 0.095 0.905 31 H 0.095 0.905 32 H 0.100 0.900 33 H 0.284 0.716 34 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.333 8.644 5.759 16.901 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.206 6.206 3 C 0.093 3.907 4 C -0.220 4.220 5 C -0.102 4.102 6 C -0.096 4.096 7 Cl -0.052 7.052 8 C -0.084 4.084 9 C -0.037 4.037 10 C -0.024 4.024 11 C -0.223 4.223 12 C -0.101 4.101 13 C -0.250 4.250 14 C 0.088 3.912 15 C -0.479 4.479 16 H 0.108 0.892 17 C -0.133 4.133 18 N -0.436 5.436 19 Si 0.736 3.264 20 H -0.197 1.197 21 H -0.219 1.219 22 H -0.167 1.167 23 C -0.204 4.204 24 H 0.071 0.929 25 H 0.071 0.929 26 H 0.117 0.883 27 H 0.151 0.849 28 H 0.148 0.852 29 H 0.160 0.840 30 H 0.113 0.887 31 H 0.113 0.887 32 H 0.117 0.883 33 H 0.095 0.905 34 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges -12.949 8.460 5.613 16.455 hybrid contribution 0.058 -0.001 0.620 0.623 sum -12.891 8.459 6.234 16.631 Atomic orbital electron populations 1.23074 0.79190 1.03951 1.00900 1.86290 1.20436 1.25982 1.87858 1.19121 0.91632 0.84400 0.95576 1.21039 0.99963 0.91517 1.09530 1.20701 0.92262 0.97726 0.99547 1.20646 0.92715 0.86283 1.09956 1.98343 1.81338 1.28182 1.97298 1.21063 1.00668 0.89079 0.97598 1.18384 0.89555 0.93756 1.02025 1.18141 0.95246 0.91542 0.97468 1.20312 1.03499 0.95416 1.03099 1.20520 0.95751 0.96262 0.97603 1.21103 1.01813 0.99677 1.02361 1.17630 0.92508 0.89999 0.91095 1.19443 1.00935 1.26094 1.01468 0.89208 1.26114 0.95451 0.91835 0.99910 1.69696 1.13249 1.25277 1.35367 0.86344 0.76368 0.80528 0.83155 1.19718 1.21903 1.16725 1.21082 0.99567 0.98076 1.01665 0.92908 0.92855 0.88253 0.84868 0.85182 0.83965 0.88679 0.88715 0.88250 0.90545 0.87976 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.24 9.81 101.05 0.99 1.23 16 2 O -0.29 -4.56 8.81 -19.32 -0.17 -4.73 16 3 C 0.14 2.19 6.59 -38.88 -0.26 1.94 16 4 C -0.20 -2.55 9.03 -39.48 -0.36 -2.91 16 5 C -0.08 -1.04 9.81 -39.51 -0.39 -1.43 16 6 C -0.07 -0.99 6.31 -39.53 -0.25 -1.24 16 7 Cl -0.08 -1.04 28.95 -51.86 -1.50 -2.54 16 8 C -0.07 -1.07 9.28 -39.24 -0.36 -1.44 16 9 C -0.04 -0.65 5.48 -104.77 -0.57 -1.23 16 10 C -0.02 -0.51 5.27 -104.98 -0.55 -1.06 16 11 C -0.20 -4.31 8.78 -38.96 -0.34 -4.65 16 12 C -0.08 -1.82 10.01 -39.72 -0.40 -2.21 16 13 C -0.23 -5.59 7.17 -38.82 -0.28 -5.86 16 14 C 0.09 2.31 5.10 -106.87 -0.55 1.76 16 15 C -0.45 -12.26 9.57 -37.74 -0.36 -12.62 16 16 H 0.09 2.56 8.06 -52.49 -0.42 2.13 16 17 C 0.09 2.25 5.40 -17.35 -0.09 2.16 16 18 N -0.81 -21.81 13.93 55.55 0.77 -21.04 16 19 Si 0.91 20.94 24.52 -169.99 -4.17 16.78 16 20 H -0.27 -6.06 6.71 56.52 0.38 -5.68 16 21 H -0.29 -6.47 7.11 56.52 0.40 -6.07 16 22 H -0.24 -5.75 6.86 56.52 0.39 -5.36 16 23 C -0.18 -4.32 9.25 -38.52 -0.36 -4.67 16 24 H 0.05 0.44 7.66 -51.93 -0.40 0.04 16 25 H 0.05 0.46 7.66 -51.93 -0.40 0.06 16 26 H 0.10 0.83 8.14 -51.93 -0.42 0.41 16 27 H 0.13 1.27 6.30 -52.49 -0.33 0.94 16 28 H 0.13 1.28 8.06 -52.48 -0.42 0.86 16 29 H 0.14 2.32 8.04 -52.49 -0.42 1.90 16 30 H 0.10 1.84 7.65 -52.49 -0.40 1.44 16 31 H 0.09 1.80 8.06 -52.48 -0.42 1.38 16 32 H 0.10 2.41 4.72 -52.48 -0.25 2.16 16 33 H 0.28 6.92 8.30 -40.82 -0.34 6.59 16 34 H 0.10 2.29 8.04 -52.49 -0.42 1.87 16 LS Contribution 304.42 15.07 4.59 4.59 Total: -1.00 -28.42 304.42 -8.08 -36.51 By element: Atomic # 1 Polarization: 6.15 SS G_CDS: -3.48 Total: 2.67 kcal Atomic # 6 Polarization: -28.11 SS G_CDS: -4.12 Total: -32.23 kcal Atomic # 7 Polarization: -21.81 SS G_CDS: 0.77 Total: -21.04 kcal Atomic # 8 Polarization: -4.56 SS G_CDS: -0.17 Total: -4.73 kcal Atomic # 14 Polarization: 20.94 SS G_CDS: -4.17 Total: 16.78 kcal Atomic # 17 Polarization: -1.04 SS G_CDS: -1.50 Total: -2.54 kcal Total LS contribution 4.59 Total: 4.59 kcal Total: -28.42 -8.08 -36.51 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001245813689.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 30.013 kcal (2) G-P(sol) polarization free energy of solvation -28.423 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.590 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.083 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.506 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.492 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds