Wall clock time and date at job start Tue Mar 31 2020 05:49:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35801 * 117.00080 * 2 1 4 4 C 1.38560 * 120.12630 * 0.28180 * 3 2 1 5 5 C 1.38190 * 120.09540 * 180.24948 * 4 3 2 6 6 C 1.38605 * 120.35496 * 359.74414 * 5 4 3 7 7 Cl 1.73597 * 119.87551 * 179.97438 * 6 5 4 8 8 C 1.37978 * 120.24988 * 359.97438 * 6 5 4 9 9 C 1.39608 * 119.89888 * 0.02562 * 8 6 5 10 10 C 1.47849 * 120.17646 * 179.97438 * 9 8 6 11 11 C 1.40007 * 119.88462 * 130.24578 * 10 9 8 12 12 C 1.36217 * 120.11549 * 180.30138 * 11 10 9 13 13 C 1.40955 * 119.87915 * 359.48124 * 12 11 10 14 14 C 1.40991 * 120.10817 * 180.27408 * 13 12 11 15 15 H 1.08006 * 120.00015 * 204.69629 * 14 13 12 16 16 C 1.39979 * 120.00184 * 24.70745 * 14 13 12 17 17 N 1.30817 * 120.00166 * 17.95741 * 16 14 13 18 18 Si 1.86808 * 119.99885 * 197.96616 * 16 14 13 19 19 H 1.48503 * 109.46996 * 89.99293 * 18 16 14 20 20 H 1.48498 * 109.47102 * 209.99452 * 18 16 14 21 21 H 1.48500 * 109.46876 * 329.99879 * 18 16 14 22 22 C 1.40952 * 119.77942 * 0.24839 * 13 12 11 23 23 C 1.36221 * 119.88048 * 0.02562 * 22 13 12 24 24 H 1.08999 * 109.47336 * 179.97438 * 1 2 3 25 25 H 1.08997 * 109.47117 * 299.99852 * 1 2 3 26 26 H 1.09000 * 109.47305 * 59.99406 * 1 2 3 27 27 H 1.07991 * 119.95022 * 359.97438 * 4 3 2 28 28 H 1.08000 * 119.81546 * 179.76583 * 5 4 3 29 29 H 1.08002 * 120.04854 * 179.97438 * 8 6 5 30 30 H 1.08003 * 119.94459 * 0.05366 * 11 10 9 31 31 H 1.08000 * 120.05817 * 179.75696 * 12 11 10 32 32 H 0.97007 * 119.99915 * 180.02562 * 17 16 14 33 33 H 1.07996 * 120.06547 * 180.02562 * 22 13 12 34 34 H 1.07995 * 119.94275 * 179.97438 * 23 22 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0455 1.2100 0.0000 4 6 1.2934 2.3737 0.0059 5 6 1.9215 3.6047 0.0007 6 6 3.3052 3.6850 -0.0051 7 17 4.0811 5.2379 -0.0123 8 6 4.0682 2.5354 -0.0052 9 6 3.4447 1.2863 0.0000 10 6 4.2563 0.0505 -0.0006 11 6 3.9876 -0.9611 0.9292 12 6 4.7364 -2.0989 0.9369 13 6 5.7762 -2.2615 -0.0007 14 6 6.5506 -3.4398 -0.0009 15 1 7.5523 -3.4276 -0.4044 16 6 6.0209 -4.6254 0.5217 17 7 4.7287 -4.7493 0.6832 18 14 7.1595 -6.0309 0.9887 19 1 7.5730 -5.8824 2.4072 20 1 6.4489 -7.3229 0.8128 21 1 8.3617 -6.0044 0.1173 22 6 6.0391 -1.2425 -0.9384 23 6 5.2880 -0.1060 -0.9340 24 1 -0.3634 -1.0276 -0.0005 25 1 -0.3633 0.5138 0.8900 26 1 -0.3634 0.5139 -0.8899 27 1 0.2149 2.3187 0.0101 28 1 1.3308 4.5088 0.0015 29 1 5.1462 2.6018 -0.0101 30 1 3.1877 -0.8374 1.6444 31 1 4.5307 -2.8770 1.6571 32 1 4.3617 -5.5708 1.0456 33 1 6.8344 -1.3624 -1.6591 34 1 5.4888 0.6756 -1.6517 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001245814586.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:49:25 Heat of formation + Delta-G solvation = -8.946589 kcal Electronic energy + Delta-G solvation = -19427.003180 eV Core-core repulsion = 16315.239631 eV Total energy + Delta-G solvation = -3111.763549 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 288.066 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -39.91216 -37.60221 -37.19564 -35.89547 -33.91153 -31.64159 -29.90481 -29.33764 -28.78876 -27.03022 -25.25673 -22.45165 -21.90850 -20.64493 -20.13952 -17.79787 -17.36717 -16.23241 -15.97598 -15.50031 -15.25539 -14.54165 -14.12466 -13.74458 -13.63601 -13.39578 -12.94283 -12.69767 -12.33163 -12.02202 -11.87314 -11.66763 -11.66165 -11.28465 -11.19220 -11.06281 -10.84889 -10.51018 -10.44353 -10.34185 -9.70179 -9.43999 -9.31367 -8.66990 -7.90300 -7.53742 -7.13524 -6.84953 -4.39600 1.43227 1.52356 2.36749 2.72537 3.02666 3.06151 3.13785 3.15299 3.60015 3.85985 3.94866 4.56936 4.94009 5.01770 5.22065 5.27767 5.42805 5.60437 5.61660 5.68680 5.85522 6.15942 6.25694 6.32761 6.37925 6.49573 6.56636 6.90160 6.95008 7.00184 7.23932 7.31247 7.59580 7.67439 7.88524 8.00754 8.10596 8.23186 8.57739 8.80631 8.92310 10.07148 Molecular weight = 288.07amu Principal moments of inertia in cm(-1) A = 0.023285 B = 0.004087 C = 0.003577 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1202.181235 B = 6848.872551 C = 7824.889441 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.292 6.292 3 C 0.123 3.877 4 C -0.198 4.198 5 C -0.100 4.100 6 C -0.064 4.064 7 Cl -0.089 7.089 8 C -0.086 4.086 9 C -0.001 4.001 10 C -0.199 4.199 11 C -0.058 4.058 12 C -0.173 4.173 13 C 0.119 3.881 14 C -0.453 4.453 15 H 0.080 0.920 16 C 0.075 3.925 17 N -0.781 5.781 18 Si 0.910 3.090 19 H -0.266 1.266 20 H -0.277 1.277 21 H -0.261 1.261 22 C -0.231 4.231 23 C -0.064 4.064 24 H 0.098 0.902 25 H 0.050 0.950 26 H 0.050 0.950 27 H 0.130 0.870 28 H 0.126 0.874 29 H 0.136 0.864 30 H 0.088 0.912 31 H 0.117 0.883 32 H 0.283 0.717 33 H 0.093 0.907 34 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.773 9.668 0.164 11.806 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.204 6.204 3 C 0.077 3.923 4 C -0.217 4.217 5 C -0.119 4.119 6 C -0.091 4.091 7 Cl -0.060 7.060 8 C -0.105 4.105 9 C -0.002 4.002 10 C -0.200 4.200 11 C -0.076 4.076 12 C -0.193 4.193 13 C 0.117 3.883 14 C -0.482 4.482 15 H 0.098 0.902 16 C -0.144 4.144 17 N -0.405 5.405 18 Si 0.734 3.266 19 H -0.191 1.191 20 H -0.202 1.202 21 H -0.185 1.185 22 C -0.250 4.250 23 C -0.082 4.082 24 H 0.116 0.884 25 H 0.069 0.931 26 H 0.069 0.931 27 H 0.147 0.853 28 H 0.144 0.856 29 H 0.154 0.846 30 H 0.106 0.894 31 H 0.135 0.865 32 H 0.094 0.906 33 H 0.111 0.889 34 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -6.811 9.412 0.226 11.620 hybrid contribution 0.092 -0.374 0.145 0.411 sum -6.719 9.039 0.371 11.269 Atomic orbital electron populations 1.23040 0.79521 1.03822 1.00624 1.86290 1.20115 1.26060 1.87946 1.19308 0.91993 0.84199 0.96768 1.21007 0.99733 0.91649 1.09346 1.20602 0.92190 0.97516 1.01579 1.20638 0.92696 0.85839 1.09905 1.98325 1.81561 1.28758 1.97358 1.21041 1.00137 0.89242 1.00046 1.18333 0.89151 0.93552 0.99120 1.17778 1.02554 0.94607 1.05055 1.20360 0.97295 0.93176 0.96782 1.20959 0.99927 0.97041 1.01328 1.17700 0.90659 0.91573 0.88397 1.19656 1.01204 0.93206 1.34109 0.90167 1.25986 0.95189 1.00281 0.92960 1.69842 1.12296 1.27254 1.31149 0.86286 0.80961 0.79333 0.80051 1.19127 1.20217 1.18486 1.20630 1.04544 0.97174 1.02699 1.20287 0.94681 0.96586 0.96653 0.88350 0.93100 0.93109 0.85265 0.85624 0.84627 0.89377 0.86485 0.90644 0.88853 0.89350 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.31 9.81 101.05 0.99 1.30 16 2 O -0.29 -5.19 8.83 -19.12 -0.17 -5.36 16 3 C 0.12 2.16 6.60 -38.75 -0.26 1.91 16 4 C -0.20 -2.83 9.03 -39.48 -0.36 -3.19 16 5 C -0.10 -1.38 9.82 -39.46 -0.39 -1.77 16 6 C -0.06 -0.97 6.31 -39.54 -0.25 -1.22 16 7 Cl -0.09 -1.19 28.95 -51.86 -1.50 -2.69 16 8 C -0.09 -1.47 9.28 -39.17 -0.36 -1.83 16 9 C 0.00 -0.01 5.48 -104.74 -0.57 -0.59 16 10 C -0.20 -4.45 5.30 -104.64 -0.55 -5.00 16 11 C -0.06 -1.37 8.71 -39.65 -0.35 -1.71 16 12 C -0.17 -4.47 8.63 -39.28 -0.34 -4.81 16 13 C 0.12 3.14 5.57 -106.80 -0.60 2.55 16 14 C -0.45 -11.76 9.03 -37.89 -0.34 -12.10 16 15 H 0.08 1.99 7.91 -52.48 -0.42 1.58 16 16 C 0.08 1.84 5.13 -17.33 -0.09 1.75 16 17 N -0.78 -19.72 10.96 55.55 0.61 -19.11 16 18 Si 0.91 18.12 29.60 -169.99 -5.03 13.09 16 19 H -0.27 -5.25 7.11 56.52 0.40 -4.85 16 20 H -0.28 -5.39 7.11 56.52 0.40 -4.99 16 21 H -0.26 -5.14 7.11 56.52 0.40 -4.74 16 22 C -0.23 -5.62 9.73 -39.28 -0.38 -6.01 16 23 C -0.06 -1.44 9.43 -39.65 -0.37 -1.81 16 24 H 0.10 1.06 8.14 -51.93 -0.42 0.64 16 25 H 0.05 0.52 7.65 -51.93 -0.40 0.13 16 26 H 0.05 0.53 7.67 -51.93 -0.40 0.13 16 27 H 0.13 1.46 6.29 -52.49 -0.33 1.13 16 28 H 0.13 1.41 8.06 -52.49 -0.42 0.99 16 29 H 0.14 2.25 8.04 -52.49 -0.42 1.83 16 30 H 0.09 1.98 7.67 -52.48 -0.40 1.58 16 31 H 0.12 3.10 6.16 -52.49 -0.32 2.78 16 32 H 0.28 6.45 8.30 -40.82 -0.34 6.11 16 33 H 0.09 2.13 8.06 -52.49 -0.42 1.71 16 34 H 0.09 1.78 8.03 -52.49 -0.42 1.35 16 LS Contribution 309.48 15.07 4.66 4.66 Total: -1.00 -27.42 309.48 -9.16 -36.58 By element: Atomic # 1 Polarization: 8.88 SS G_CDS: -3.51 Total: 5.36 kcal Atomic # 6 Polarization: -28.32 SS G_CDS: -4.22 Total: -32.54 kcal Atomic # 7 Polarization: -19.72 SS G_CDS: 0.61 Total: -19.11 kcal Atomic # 8 Polarization: -5.19 SS G_CDS: -0.17 Total: -5.36 kcal Atomic # 14 Polarization: 18.12 SS G_CDS: -5.03 Total: 13.09 kcal Atomic # 17 Polarization: -1.19 SS G_CDS: -1.50 Total: -2.69 kcal Total LS contribution 4.66 Total: 4.66 kcal Total: -27.42 -9.16 -36.58 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001245814586.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.630 kcal (2) G-P(sol) polarization free energy of solvation -27.420 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 0.210 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.157 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.577 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.947 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds