Wall clock time and date at job start Tue Mar 31 2020 06:44:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.38188 * 119.61145 * 2 1 4 4 C 1.38664 * 119.19199 * 179.77514 * 3 2 1 5 5 C 1.38614 * 118.43549 * 0.49798 * 4 3 2 6 6 S 1.76200 * 120.42252 * 179.77201 * 5 4 3 7 7 O 1.42096 * 106.40309 * 228.51446 * 6 5 4 8 8 O 1.42094 * 106.40359 * 1.43988 * 6 5 4 9 9 N 1.65604 * 107.21627 * 114.97633 * 6 5 4 10 10 C 1.46506 * 120.00081 * 269.99622 * 9 6 5 11 11 C 1.36940 * 120.00005 * 90.00257 * 9 6 5 12 12 H 1.07997 * 120.00331 * 23.34015 * 11 9 6 13 13 C 1.38816 * 119.99719 * 203.34409 * 11 9 6 14 14 N 1.31618 * 120.00145 * 10.67878 * 13 11 9 15 15 Si 1.86794 * 119.99588 * 190.67483 * 13 11 9 16 16 H 1.48497 * 109.47481 * 0.02562 * 15 13 11 17 17 H 1.48502 * 109.46890 * 120.00249 * 15 13 11 18 18 H 1.48505 * 109.47485 * 240.00018 * 15 13 11 19 19 C 1.38347 * 119.15012 * 359.74767 * 5 4 3 20 20 Cl 1.73604 * 119.63297 * 179.97438 * 19 5 4 21 21 N 1.31876 * 119.60686 * 180.28275 * 2 1 3 22 22 H 1.08997 * 109.46773 * 269.72215 * 1 2 3 23 23 H 1.08999 * 109.46953 * 29.72202 * 1 2 3 24 24 H 1.08997 * 109.47136 * 149.72017 * 1 2 3 25 25 H 1.07995 * 120.40159 * 0.02562 * 3 2 1 26 26 H 1.07996 * 120.78398 * 180.22473 * 4 3 2 27 27 H 1.08999 * 109.46532 * 94.14634 * 10 9 6 28 28 H 1.08996 * 109.46744 * 214.14689 * 10 9 6 29 29 H 1.08995 * 109.46800 * 334.14843 * 10 9 6 30 30 H 0.96997 * 120.00037 * 179.97438 * 14 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1898 1.2014 0.0000 4 6 3.5764 1.1913 0.0048 5 6 4.2276 -0.0324 -0.0012 6 16 5.9880 -0.1064 -0.0017 7 8 6.3510 -1.0204 -1.0273 8 8 6.4461 1.2381 0.0391 9 7 6.4497 -0.8013 1.4288 10 6 6.7024 0.0378 2.6029 11 6 6.5956 -2.1602 1.5143 12 1 6.7850 -2.7401 0.6231 13 6 6.4999 -2.7924 2.7464 14 7 6.0643 -2.1272 3.7953 15 14 6.9892 -4.5871 2.9157 16 1 7.4426 -5.1029 1.5991 17 1 8.0934 -4.7082 3.9013 18 1 5.8211 -5.3769 3.3817 19 6 3.4775 -1.1949 -0.0064 20 17 4.2800 -2.7343 -0.0146 21 7 2.1586 -1.1466 -0.0057 22 1 -0.3633 -0.0050 1.0276 23 1 -0.3633 0.8925 -0.5095 24 1 -0.3633 -0.8874 -0.5182 25 1 1.6501 2.1368 0.0004 26 1 4.1359 2.1150 0.0085 27 1 5.7979 0.0971 3.2084 28 1 7.5077 -0.3978 3.1943 29 1 6.9893 1.0383 2.2794 30 1 5.9971 -2.5690 4.6562 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000190423902.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:44:37 Heat of formation + Delta-G solvation = -31.768219 kcal Electronic energy + Delta-G solvation = -19624.869496 eV Core-core repulsion = 16380.875362 eV Total energy + Delta-G solvation = -3243.994134 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 290.028 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -39.81519 -36.19926 -35.74487 -35.63968 -34.39458 -32.75628 -31.88378 -31.58231 -27.56087 -26.55726 -23.62377 -23.23042 -22.17898 -18.58493 -17.62894 -16.93262 -16.77639 -16.04560 -15.67144 -14.74449 -14.49598 -14.26206 -13.98564 -13.32962 -13.06939 -12.89232 -12.69340 -12.39519 -12.07270 -11.91168 -11.53551 -11.21934 -11.09402 -10.92551 -10.78761 -10.66275 -10.40100 -10.30785 -10.19286 -10.11588 -9.63921 -9.33316 -9.11907 -8.55079 -8.15684 -6.67756 -4.07974 1.02593 1.45839 1.71605 2.37632 3.04666 3.11075 3.16843 3.76978 3.92270 4.37709 4.62654 4.69694 4.89302 4.97840 5.18164 5.47251 5.50974 5.57098 5.61527 5.94151 5.96328 6.22272 6.26277 6.39485 6.78436 6.80042 7.03791 7.14731 7.35535 8.00167 8.18693 8.52227 9.01737 10.27088 Molecular weight = 290.03amu Principal moments of inertia in cm(-1) A = 0.018577 B = 0.008382 C = 0.007103 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1506.841181 B = 3339.881629 C = 3941.060411 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.103 4.103 2 C 0.162 3.838 3 C -0.203 4.203 4 C 0.015 3.985 5 C -0.700 4.700 6 S 2.506 3.494 7 O -0.973 6.973 8 O -1.004 7.004 9 N -0.793 5.793 10 C 0.121 3.879 11 C -0.216 4.216 12 H 0.119 0.881 13 C 0.034 3.966 14 N -0.822 5.822 15 Si 0.916 3.084 16 H -0.258 1.258 17 H -0.272 1.272 18 H -0.274 1.274 19 C 0.263 3.737 20 Cl 0.008 6.992 21 N -0.500 5.500 22 H 0.080 0.920 23 H 0.076 0.924 24 H 0.078 0.922 25 H 0.138 0.862 26 H 0.150 0.850 27 H 0.052 0.948 28 H 0.076 0.924 29 H 0.046 0.954 30 H 0.277 0.723 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.477 2.706 -1.058 7.099 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.160 4.160 2 C 0.024 3.976 3 C -0.223 4.223 4 C -0.011 4.011 5 C -0.777 4.777 6 S 2.601 3.399 7 O -0.962 6.962 8 O -0.993 6.993 9 N -0.617 5.617 10 C -0.025 4.025 11 C -0.367 4.367 12 H 0.137 0.863 13 C -0.180 4.180 14 N -0.462 5.462 15 Si 0.741 3.259 16 H -0.182 1.182 17 H -0.198 1.198 18 H -0.199 1.199 19 C 0.098 3.902 20 Cl 0.037 6.963 21 N -0.213 5.213 22 H 0.099 0.901 23 H 0.095 0.905 24 H 0.097 0.903 25 H 0.156 0.844 26 H 0.168 0.832 27 H 0.071 0.929 28 H 0.095 0.905 29 H 0.064 0.936 30 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -6.544 2.359 -1.750 7.173 hybrid contribution -0.358 -0.228 0.511 0.664 sum -6.902 2.131 -1.239 7.329 Atomic orbital electron populations 1.20753 0.88563 1.03464 1.03264 1.21268 0.96684 0.87779 0.91896 1.21994 0.95371 0.99056 1.05911 1.21321 0.94042 0.97069 0.88688 1.33210 1.35543 0.96370 1.12541 1.13320 0.74884 0.73505 0.78177 1.93375 1.81834 1.62996 1.58011 1.93298 1.80317 1.37820 1.87838 1.54362 1.64521 1.13730 1.29045 1.21351 1.02177 0.91511 0.87467 1.20189 1.37710 0.82791 0.95995 0.86320 1.25778 0.95954 1.00366 0.95900 1.70087 1.38011 1.37190 1.00956 0.85960 0.78905 0.81315 0.79712 1.18204 1.19772 1.19896 1.21297 0.88961 0.88421 0.91524 1.98491 1.74470 1.27875 1.95426 1.66948 1.08843 1.29973 1.15586 0.90108 0.90533 0.90317 0.84446 0.83213 0.92900 0.90518 0.93565 0.91245 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 23. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -1.20 10.17 36.01 0.37 -0.83 16 2 C 0.16 2.70 6.78 -82.59 -0.56 2.14 16 3 C -0.20 -3.22 9.74 -39.44 -0.38 -3.60 16 4 C 0.02 0.29 9.66 -39.29 -0.38 -0.09 16 5 C -0.70 -15.40 5.93 -39.40 -0.23 -15.63 16 6 S 2.51 59.65 5.18 -107.50 -0.56 59.09 16 7 O -0.97 -25.00 15.32 -57.17 -0.88 -25.88 16 8 O -1.00 -24.54 15.61 -57.17 -0.89 -25.43 16 9 N -0.79 -18.85 3.31 -66.69 -0.22 -19.07 16 10 C 0.12 2.65 8.92 59.85 0.53 3.18 16 11 C -0.22 -5.19 6.67 -15.06 -0.10 -5.29 16 12 H 0.12 2.89 6.47 -52.49 -0.34 2.55 16 13 C 0.03 0.78 5.14 -17.43 -0.09 0.70 16 14 N -0.82 -19.24 10.61 55.49 0.59 -18.65 16 15 Si 0.92 18.26 29.57 -169.99 -5.03 13.23 16 16 H -0.26 -5.11 7.11 56.52 0.40 -4.71 16 17 H -0.27 -5.30 7.11 56.52 0.40 -4.90 16 18 H -0.27 -5.46 7.11 56.52 0.40 -5.06 16 19 C 0.26 5.86 7.26 -17.45 -0.13 5.73 16 20 Cl 0.01 0.19 23.38 -51.86 -1.21 -1.03 16 21 N -0.50 -10.17 10.25 -6.62 -0.07 -10.24 16 22 H 0.08 0.84 8.14 -51.93 -0.42 0.42 16 23 H 0.08 0.68 8.07 -51.93 -0.42 0.26 16 24 H 0.08 0.90 8.14 -51.93 -0.42 0.48 16 25 H 0.14 1.60 8.06 -52.49 -0.42 1.17 16 26 H 0.15 2.55 7.44 -52.49 -0.39 2.15 16 27 H 0.05 1.17 7.40 -51.93 -0.38 0.79 16 28 H 0.08 1.66 7.23 -51.93 -0.38 1.29 16 29 H 0.05 0.95 6.93 -51.93 -0.36 0.59 16 30 H 0.28 6.06 8.31 -40.82 -0.34 5.72 16 LS Contribution 281.03 15.07 4.24 4.24 Total: -1.00 -29.00 281.03 -7.67 -36.67 By element: Atomic # 1 Polarization: 3.43 SS G_CDS: -2.67 Total: 0.76 kcal Atomic # 6 Polarization: -12.72 SS G_CDS: -0.97 Total: -13.69 kcal Atomic # 7 Polarization: -48.26 SS G_CDS: 0.30 Total: -47.96 kcal Atomic # 8 Polarization: -49.54 SS G_CDS: -1.77 Total: -51.31 kcal Atomic # 14 Polarization: 18.26 SS G_CDS: -5.03 Total: 13.23 kcal Atomic # 16 Polarization: 59.65 SS G_CDS: -0.56 Total: 59.09 kcal Atomic # 17 Polarization: 0.19 SS G_CDS: -1.21 Total: -1.03 kcal Total LS contribution 4.24 Total: 4.24 kcal Total: -29.00 -7.67 -36.67 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000190423902.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 4.906 kcal (2) G-P(sol) polarization free energy of solvation -29.000 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -24.094 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.675 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.675 kcal (6) G-S(sol) free energy of system = (1) + (5) -31.768 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds