Wall clock time and date at job start Tue Mar 31 2020 06:46:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 Br 1.96601 * 115.54768 * 2 1 4 4 C 1.53000 * 117.50246 * 214.32763 * 2 1 3 5 5 C 1.53000 * 117.49691 * 145.66448 * 2 1 3 6 6 H 1.09002 * 117.50034 * 215.00026 * 5 2 1 7 7 C 1.52998 * 117.49980 * 0.02971 * 5 2 1 8 8 O 1.45206 * 109.47078 * 184.99518 * 7 5 2 9 9 C 1.34223 * 116.99769 * 179.97438 * 8 7 5 10 10 O 1.20829 * 120.00529 * 0.02562 * 9 8 7 11 11 C 1.50708 * 119.99785 * 180.02562 * 9 8 7 12 12 C 1.52994 * 109.47052 * 180.02562 * 11 9 8 13 13 C 1.50708 * 109.47052 * 179.97438 * 12 11 9 14 14 H 1.07995 * 119.99479 * 359.97438 * 13 12 11 15 15 C 1.37877 * 119.99837 * 180.02562 * 13 12 11 16 16 N 1.31517 * 120.00191 * 359.97438 * 15 13 12 17 17 Si 1.86795 * 119.99767 * 180.02562 * 15 13 12 18 18 H 1.48507 * 109.47279 * 359.97438 * 17 15 13 19 19 H 1.48501 * 109.47596 * 119.99595 * 17 15 13 20 20 H 1.48504 * 109.47187 * 239.99640 * 17 15 13 21 21 H 1.08994 * 109.47069 * 34.41950 * 1 2 3 22 22 H 1.09003 * 109.46776 * 154.41856 * 1 2 3 23 23 H 1.09000 * 109.47197 * 274.41826 * 1 2 3 24 24 H 1.09008 * 117.49673 * 359.97438 * 4 2 1 25 25 H 1.08999 * 117.49942 * 144.97263 * 4 2 1 26 26 H 1.08995 * 109.47108 * 304.99481 * 7 5 2 27 27 H 1.09001 * 109.47177 * 64.99959 * 7 5 2 28 28 H 1.09003 * 109.46590 * 299.99756 * 11 9 8 29 29 H 1.08993 * 109.46983 * 59.99727 * 11 9 8 30 30 H 1.09001 * 109.47588 * 299.99394 * 12 11 9 31 31 H 1.09007 * 109.47568 * 60.00110 * 12 11 9 32 32 H 0.97001 * 119.99530 * 180.02562 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 35 2.3779 1.7738 0.0000 4 6 2.2366 -1.1207 -0.7653 5 6 2.2365 -1.1207 0.7655 6 1 3.1714 -0.8746 1.2690 7 6 1.3588 -2.1559 1.4718 8 8 2.1983 -3.0620 2.2352 9 6 1.5784 -4.0364 2.9192 10 8 0.3743 -4.1295 2.8811 11 6 2.3843 -5.0144 3.7349 12 6 1.4425 -6.0144 4.4086 13 6 2.2485 -6.9928 5.2238 14 1 3.3247 -6.9098 5.2575 15 6 1.6118 -7.9944 5.9255 16 7 0.3012 -8.0958 5.8839 17 14 2.6107 -9.2066 6.9365 18 1 4.0542 -8.8783 6.8186 19 1 2.1982 -9.1219 8.3605 20 1 2.3740 -10.5838 6.4337 21 1 -0.3633 0.8477 -0.5809 22 1 -0.3633 -0.9270 -0.4438 23 1 -0.3633 0.0792 1.0246 24 1 1.6113 -1.8584 -1.2685 25 1 3.1713 -0.8745 -1.2692 26 1 0.6673 -1.6480 2.1440 27 1 0.7951 -2.7213 0.7297 28 1 3.0751 -5.5489 3.0828 29 1 2.9473 -4.4750 4.4966 30 1 0.7514 -5.4803 5.0607 31 1 0.8798 -6.5538 3.6466 32 1 -0.1466 -8.8002 6.3780 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000861328743.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:46:17 Heat of formation + Delta-G solvation = -79.998863 kcal Electronic energy + Delta-G solvation = -15081.435698 eV Core-core repulsion = 12281.709912 eV Total energy + Delta-G solvation = -2799.725785 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 290.030 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -40.09482 -38.48075 -35.97086 -33.60331 -31.23411 -30.57811 -29.06063 -27.81450 -25.72446 -22.33955 -21.72176 -19.94753 -19.47147 -17.45399 -16.65983 -16.25768 -15.79342 -15.16915 -14.47055 -14.35627 -14.02797 -13.68012 -12.88814 -12.69159 -12.31450 -12.26374 -12.07959 -11.59157 -11.22504 -11.15410 -11.01216 -10.94168 -10.63828 -10.43236 -10.08980 -10.03361 -9.97919 -9.82737 -9.54139 -9.17934 -8.39689 -6.03310 -4.08156 1.19902 2.77223 2.79737 3.24340 3.29841 3.37445 3.41117 4.07738 4.25656 4.29955 4.44037 4.84305 5.06252 5.26356 5.28224 5.29394 5.32321 5.34743 5.42421 5.53257 5.71163 5.83557 6.09846 6.17686 6.61068 6.89394 7.64780 7.71035 7.96085 8.22287 8.37859 8.99170 9.56118 11.07734 Molecular weight = 290.03amu Principal moments of inertia in cm(-1) A = 0.057305 B = 0.002615 C = 0.002561 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 488.498048 B =10704.312299 C =10931.355032 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.089 4.089 3 Br -0.113 7.113 4 C -0.146 4.146 5 C -0.124 4.124 6 H 0.129 0.871 7 C 0.094 3.906 8 O -0.363 6.363 9 C 0.457 3.543 10 O -0.506 6.506 11 C -0.103 4.103 12 C 0.032 3.968 13 C -0.528 4.528 14 H 0.059 0.941 15 C 0.058 3.942 16 N -0.889 5.889 17 Si 0.896 3.104 18 H -0.272 1.272 19 H -0.283 1.283 20 H -0.284 1.284 21 H 0.073 0.927 22 H 0.075 0.925 23 H 0.073 0.927 24 H 0.112 0.888 25 H 0.111 0.889 26 H 0.076 0.924 27 H 0.073 0.927 28 H 0.093 0.907 29 H 0.093 0.907 30 H 0.026 0.974 31 H 0.026 0.974 32 H 0.261 0.739 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.857 20.078 -14.896 25.296 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C -0.166 4.166 3 Br -0.032 7.032 4 C -0.184 4.184 5 C -0.144 4.144 6 H 0.147 0.853 7 C 0.020 3.980 8 O -0.281 6.281 9 C 0.301 3.699 10 O -0.392 6.392 11 C -0.140 4.140 12 C -0.005 4.005 13 C -0.566 4.566 14 H 0.078 0.922 15 C -0.144 4.144 16 N -0.528 5.528 17 Si 0.723 3.277 18 H -0.196 1.196 19 H -0.210 1.210 20 H -0.210 1.210 21 H 0.092 0.908 22 H 0.094 0.906 23 H 0.092 0.908 24 H 0.130 0.870 25 H 0.129 0.871 26 H 0.094 0.906 27 H 0.091 0.909 28 H 0.111 0.889 29 H 0.111 0.889 30 H 0.044 0.956 31 H 0.044 0.956 32 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges 3.610 20.595 -14.862 25.653 hybrid contribution 0.165 -0.898 0.515 1.049 sum 3.775 19.697 -14.347 24.659 Atomic orbital electron populations 1.21553 0.88831 1.03591 1.03658 1.24982 0.96643 0.85250 1.09757 1.97371 1.81934 1.24779 1.99099 1.23653 1.02588 0.97940 0.94187 1.22592 1.01414 0.95912 0.94467 0.85286 1.22363 0.91617 0.89370 0.94660 1.86546 1.41976 1.40631 1.58956 1.24809 0.88505 0.79560 0.77002 1.90639 1.16244 1.71597 1.60714 1.21777 0.99953 0.94672 0.97645 1.19031 0.93764 0.92084 0.95603 1.21194 0.93406 1.12821 1.29197 0.92229 1.25027 0.94916 0.97737 0.96696 1.70005 1.07711 1.33062 1.42006 0.86484 0.80297 0.80959 0.79926 1.19627 1.20960 1.20969 0.90752 0.90578 0.90793 0.87000 0.87113 0.90613 0.90906 0.88888 0.88881 0.95569 0.95582 0.92894 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.92 8.92 37.16 0.33 -0.59 16 2 C -0.09 -0.78 3.11 -90.62 -0.28 -1.06 16 3 Br -0.11 -1.06 33.94 -68.01 -2.31 -3.36 16 4 C -0.15 -1.18 9.64 -26.69 -0.26 -1.44 16 5 C -0.12 -1.25 5.89 -90.58 -0.53 -1.78 16 6 H 0.13 1.33 8.14 -51.93 -0.42 0.91 16 7 C 0.09 1.20 4.83 37.16 0.18 1.38 16 8 O -0.36 -5.79 10.22 -39.24 -0.40 -6.19 16 9 C 0.46 8.83 7.96 36.01 0.29 9.11 16 10 O -0.51 -11.26 15.73 -18.75 -0.29 -11.55 16 11 C -0.10 -2.07 5.75 -27.88 -0.16 -2.23 16 12 C 0.03 0.84 4.26 -27.88 -0.12 0.73 16 13 C -0.53 -14.66 9.11 -34.44 -0.31 -14.97 16 14 H 0.06 1.56 7.74 -52.49 -0.41 1.16 16 15 C 0.06 1.66 5.46 -17.82 -0.10 1.56 16 16 N -0.89 -26.86 13.29 55.43 0.74 -26.12 16 17 Si 0.90 21.32 29.54 -169.99 -5.02 16.30 16 18 H -0.27 -6.26 7.11 56.52 0.40 -5.86 16 19 H -0.28 -6.70 7.11 56.52 0.40 -6.29 16 20 H -0.28 -6.69 7.11 56.52 0.40 -6.29 16 21 H 0.07 0.52 8.13 -51.93 -0.42 0.10 16 22 H 0.08 0.54 7.90 -51.93 -0.41 0.13 16 23 H 0.07 0.60 7.84 -51.93 -0.41 0.19 16 24 H 0.11 0.81 7.94 -51.92 -0.41 0.40 16 25 H 0.11 0.81 8.14 -51.93 -0.42 0.39 16 26 H 0.08 0.97 7.76 -51.93 -0.40 0.57 16 27 H 0.07 0.89 7.87 -51.93 -0.41 0.49 16 28 H 0.09 1.71 8.14 -51.93 -0.42 1.29 16 29 H 0.09 1.72 8.14 -51.93 -0.42 1.30 16 30 H 0.03 0.74 8.10 -51.93 -0.42 0.32 16 31 H 0.03 0.73 8.10 -51.93 -0.42 0.31 16 32 H 0.26 7.39 8.31 -40.82 -0.34 7.05 16 LS Contribution 301.21 15.07 4.54 4.54 Total: -1.00 -31.29 301.21 -8.25 -39.54 By element: Atomic # 1 Polarization: 0.69 SS G_CDS: -4.54 Total: -3.85 kcal Atomic # 6 Polarization: -8.33 SS G_CDS: -0.97 Total: -9.30 kcal Atomic # 7 Polarization: -26.86 SS G_CDS: 0.74 Total: -26.12 kcal Atomic # 8 Polarization: -17.05 SS G_CDS: -0.70 Total: -17.75 kcal Atomic # 14 Polarization: 21.32 SS G_CDS: -5.02 Total: 16.30 kcal Atomic # 35 Polarization: -1.06 SS G_CDS: -2.31 Total: -3.36 kcal Total LS contribution 4.54 Total: 4.54 kcal Total: -31.29 -8.25 -39.54 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000861328743.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.458 kcal (2) G-P(sol) polarization free energy of solvation -31.291 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.748 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.251 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.541 kcal (6) G-S(sol) free energy of system = (1) + (5) -79.999 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds