Wall clock time and date at job start Tue Mar 31 2020 06:45:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.38185 * 120.39817 * 2 1 4 4 N 1.31884 * 120.77609 * 179.97438 * 3 2 1 5 5 C 1.31979 * 121.70794 * 359.70435 * 4 3 2 6 6 Cl 1.73599 * 119.63350 * 180.29116 * 5 4 3 7 7 C 1.38355 * 120.72971 * 0.58242 * 5 4 3 8 8 S 1.76202 * 120.42371 * 179.70502 * 7 5 4 9 9 O 1.42098 * 106.39988 * 181.18195 * 8 7 5 10 10 O 1.42101 * 106.39830 * 48.26468 * 8 7 5 11 11 N 1.65597 * 107.21525 * 294.72653 * 8 7 5 12 12 C 1.46495 * 119.99851 * 269.71894 * 11 8 7 13 13 C 1.36936 * 120.00045 * 90.00197 * 11 8 7 14 14 H 1.07996 * 120.00106 * 353.51398 * 13 11 8 15 15 C 1.38818 * 119.99908 * 173.51769 * 13 11 8 16 16 N 1.31615 * 119.99818 * 334.67122 * 15 13 11 17 17 Si 1.86795 * 120.00106 * 154.66839 * 15 13 11 18 18 H 1.48507 * 109.47154 * 84.97680 * 17 15 13 19 19 H 1.48495 * 109.47404 * 204.98051 * 17 15 13 20 20 H 1.48498 * 109.47227 * 324.98147 * 17 15 13 21 21 C 1.38604 * 119.15138 * 359.42947 * 7 5 4 22 22 H 1.09007 * 109.47203 * 270.02101 * 1 2 3 23 23 H 1.08998 * 109.47218 * 30.02563 * 1 2 3 24 24 H 1.08999 * 109.46924 * 150.02727 * 1 2 3 25 25 H 1.08000 * 119.61255 * 0.02562 * 3 2 1 26 26 H 1.09002 * 109.47640 * 264.82159 * 12 11 8 27 27 H 1.09003 * 109.46844 * 24.82330 * 12 11 8 28 28 H 1.09005 * 109.47343 * 144.81620 * 12 11 8 29 29 H 0.96998 * 120.00153 * 180.02562 * 16 15 13 30 30 H 1.08001 * 120.78431 * 180.25018 * 21 7 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2063 1.1919 0.0000 4 7 3.5251 1.2006 0.0005 5 6 4.2261 0.0824 0.0068 6 17 5.9605 0.1567 0.0148 7 6 3.5941 -1.1483 0.0011 8 16 4.5381 -2.6362 0.0018 9 8 3.6024 -3.7050 -0.0330 10 8 5.5147 -2.4911 1.0237 11 7 5.3657 -2.6921 -1.4314 12 6 4.7636 -3.3384 -2.6002 13 6 6.6153 -2.1394 -1.5226 14 1 7.0184 -1.5763 -0.6939 15 6 7.3637 -2.3028 -2.6802 16 7 7.1476 -3.3388 -3.4628 17 14 8.6775 -1.0525 -3.1273 18 1 9.9435 -1.3938 -2.4300 19 1 8.9001 -1.0717 -4.5953 20 1 8.2334 0.3022 -2.7117 21 6 2.2089 -1.1960 0.0006 22 1 -0.3634 0.0004 1.0277 23 1 -0.3633 0.8897 -0.5142 24 1 -0.3633 -0.8902 -0.5134 25 1 1.6664 2.1273 0.0004 26 1 5.1092 -4.3703 -2.6631 27 1 3.6779 -3.3240 -2.5042 28 1 5.0557 -2.8018 -3.5029 29 1 7.6709 -3.4532 -4.2715 30 1 1.6883 -2.1422 0.0003 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000886401238.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:45:50 Heat of formation + Delta-G solvation = -21.309721 kcal Electronic energy + Delta-G solvation = -19568.737006 eV Core-core repulsion = 16325.196386 eV Total energy + Delta-G solvation = -3243.540620 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 290.028 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -40.01544 -36.48645 -35.93981 -35.69649 -34.68234 -33.44143 -31.85417 -31.47186 -27.16590 -26.51624 -24.00658 -23.45356 -22.32443 -18.58635 -17.59341 -17.24020 -16.99207 -16.34322 -16.11570 -14.62560 -14.52272 -14.29115 -13.90142 -13.36532 -13.18650 -13.12748 -12.94794 -12.65426 -12.19321 -12.02121 -11.66318 -11.36666 -11.19846 -11.06458 -10.85833 -10.85417 -10.58435 -10.56325 -10.24227 -9.92491 -9.67901 -9.42345 -9.11688 -8.64610 -8.20640 -6.54044 -3.83192 0.80414 1.22518 1.43423 2.16934 3.13865 3.20349 3.26189 3.59381 3.99871 4.30693 4.56809 4.67712 4.72531 4.92298 4.93648 5.05777 5.23111 5.45675 5.59547 5.73201 5.81097 5.99703 6.13334 6.18896 6.57128 6.81661 6.98597 7.34700 7.44257 7.77681 8.25625 8.72806 9.11966 10.47035 Molecular weight = 290.03amu Principal moments of inertia in cm(-1) A = 0.020262 B = 0.007917 C = 0.006860 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1381.575629 B = 3535.842343 C = 4080.530873 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.105 4.105 2 C -0.169 4.169 3 C 0.143 3.857 4 N -0.494 5.494 5 C 0.251 3.749 6 Cl 0.011 6.989 7 C -0.705 4.705 8 S 2.590 3.410 9 O -0.984 6.984 10 O -0.957 6.957 11 N -0.812 5.812 12 C 0.120 3.880 13 C -0.283 4.283 14 H 0.120 0.880 15 C 0.049 3.951 16 N -0.833 5.833 17 Si 0.889 3.111 18 H -0.271 1.271 19 H -0.278 1.278 20 H -0.263 1.263 21 C 0.018 3.982 22 H 0.073 0.927 23 H 0.069 0.931 24 H 0.071 0.929 25 H 0.162 0.838 26 H 0.066 0.934 27 H 0.029 0.971 28 H 0.069 0.931 29 H 0.273 0.727 30 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.313 5.943 1.835 11.200 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.162 4.162 2 C -0.172 4.172 3 C -0.015 4.015 4 N -0.206 5.206 5 C 0.086 3.914 6 Cl 0.039 6.961 7 C -0.783 4.783 8 S 2.677 3.323 9 O -0.973 6.973 10 O -0.946 6.946 11 N -0.641 5.641 12 C -0.025 4.025 13 C -0.423 4.423 14 H 0.137 0.863 15 C -0.162 4.162 16 N -0.473 5.473 17 Si 0.714 3.286 18 H -0.197 1.197 19 H -0.203 1.203 20 H -0.187 1.187 21 C -0.009 4.009 22 H 0.091 0.909 23 H 0.088 0.912 24 H 0.090 0.910 25 H 0.179 0.821 26 H 0.084 0.916 27 H 0.048 0.952 28 H 0.087 0.913 29 H 0.084 0.916 30 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges -8.852 6.113 2.441 11.031 hybrid contribution 0.066 0.705 -0.730 1.017 sum -8.785 6.818 1.712 11.252 Atomic orbital electron populations 1.20686 0.89655 1.03278 1.02630 1.21036 0.97874 0.94481 1.03821 1.22695 0.88654 0.97697 0.92414 1.67181 1.08461 1.30461 1.14447 1.21399 0.89070 0.88718 0.92242 1.98500 1.04169 1.97966 1.95415 1.33232 1.08213 1.23661 1.13160 1.08090 0.72641 0.76019 0.75537 1.93409 1.63808 1.52674 1.87428 1.93462 1.58036 1.86683 1.56450 1.53866 1.20038 1.61153 1.29076 1.21290 0.92584 0.98904 0.89772 1.19813 0.88059 1.31863 1.02538 0.86252 1.25140 0.99000 0.96198 0.95823 1.70189 1.39841 1.23247 1.13974 0.86522 0.81297 0.82473 0.78312 1.19692 1.20335 1.18715 1.21264 0.91555 0.99033 0.89035 0.90880 0.91158 0.90988 0.82105 0.91556 0.95213 0.91267 0.91630 0.82898 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 39. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.98 10.04 36.01 0.36 -0.62 16 2 C -0.17 -2.36 5.90 -104.48 -0.62 -2.98 16 3 C 0.14 2.08 10.86 -17.55 -0.19 1.89 16 4 N -0.49 -9.12 10.34 -10.36 -0.11 -9.22 16 5 C 0.25 5.14 7.26 -17.45 -0.13 5.02 16 6 Cl 0.01 0.22 22.70 -51.86 -1.18 -0.95 16 7 C -0.71 -14.27 5.93 -39.40 -0.23 -14.50 16 8 S 2.59 59.40 5.14 -107.50 -0.55 58.84 16 9 O -0.98 -23.01 16.01 -57.17 -0.92 -23.92 16 10 O -0.96 -23.96 15.44 -57.17 -0.88 -24.84 16 11 N -0.81 -19.51 3.32 -66.69 -0.22 -19.73 16 12 C 0.12 2.69 8.68 59.84 0.52 3.21 16 13 C -0.28 -7.11 7.88 -15.06 -0.12 -7.22 16 14 H 0.12 2.98 4.67 -52.49 -0.25 2.74 16 15 C 0.05 1.21 4.93 -17.43 -0.09 1.12 16 16 N -0.83 -20.73 10.58 55.49 0.59 -20.14 16 17 Si 0.89 19.07 29.62 -169.99 -5.04 14.03 16 18 H -0.27 -5.80 7.11 56.52 0.40 -5.40 16 19 H -0.28 -5.85 7.11 56.52 0.40 -5.45 16 20 H -0.26 -5.59 7.11 56.52 0.40 -5.19 16 21 C 0.02 0.30 9.35 -39.29 -0.37 -0.07 16 22 H 0.07 0.59 8.14 -51.93 -0.42 0.17 16 23 H 0.07 0.52 8.09 -51.93 -0.42 0.10 16 24 H 0.07 0.62 8.10 -51.93 -0.42 0.20 16 25 H 0.16 1.67 8.06 -52.49 -0.42 1.25 16 26 H 0.07 1.53 7.77 -51.93 -0.40 1.13 16 27 H 0.03 0.58 7.60 -51.93 -0.39 0.19 16 28 H 0.07 1.57 6.55 -51.93 -0.34 1.23 16 29 H 0.27 6.37 8.31 -40.82 -0.34 6.03 16 30 H 0.15 2.33 7.44 -52.49 -0.39 1.94 16 LS Contribution 280.01 15.07 4.22 4.22 Total: -1.00 -29.39 280.01 -7.54 -36.92 By element: Atomic # 1 Polarization: 1.54 SS G_CDS: -2.59 Total: -1.06 kcal Atomic # 6 Polarization: -13.29 SS G_CDS: -0.86 Total: -14.15 kcal Atomic # 7 Polarization: -49.35 SS G_CDS: 0.26 Total: -49.09 kcal Atomic # 8 Polarization: -46.97 SS G_CDS: -1.80 Total: -48.77 kcal Atomic # 14 Polarization: 19.07 SS G_CDS: -5.04 Total: 14.03 kcal Atomic # 16 Polarization: 59.40 SS G_CDS: -0.55 Total: 58.84 kcal Atomic # 17 Polarization: 0.22 SS G_CDS: -1.18 Total: -0.95 kcal Total LS contribution 4.22 Total: 4.22 kcal Total: -29.39 -7.54 -36.92 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000886401238.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.613 kcal (2) G-P(sol) polarization free energy of solvation -29.386 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.773 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.537 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.922 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.310 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds