Wall clock time and date at job start Tue Mar 31 2020 06:47:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.38618 * 120.77862 * 2 1 4 4 C 1.38350 * 119.14654 * 179.72749 * 3 2 1 5 5 Cl 1.73601 * 119.63119 * 180.24949 * 4 3 2 6 6 N 1.31977 * 120.73528 * 0.55578 * 4 3 2 7 7 C 1.31883 * 121.70830 * 359.71430 * 6 4 3 8 8 C 1.38190 * 120.77384 * 0.02562 * 7 6 4 9 9 S 1.76203 * 120.39855 * 180.02562 * 8 7 6 10 10 O 1.42103 * 106.40334 * 228.51578 * 9 8 7 11 11 O 1.42100 * 106.40574 * 1.43661 * 9 8 7 12 12 N 1.65600 * 107.21867 * 114.97705 * 9 8 7 13 13 C 1.46494 * 120.00171 * 270.00356 * 12 9 8 14 14 C 1.36940 * 120.00044 * 89.99829 * 12 9 8 15 15 H 1.07995 * 119.99835 * 22.79487 * 14 12 9 16 16 C 1.38810 * 120.00248 * 202.79892 * 14 12 9 17 17 N 1.31622 * 120.00030 * 10.92537 * 16 14 12 18 18 Si 1.86799 * 120.00315 * 190.92865 * 16 14 12 19 19 H 1.48498 * 109.47119 * 89.99528 * 18 16 14 20 20 H 1.48505 * 109.47218 * 209.99935 * 18 16 14 21 21 H 1.48503 * 109.46833 * 329.99680 * 18 16 14 22 22 H 1.09002 * 109.46872 * 269.72015 * 1 2 3 23 23 H 1.08996 * 109.46344 * 149.72291 * 1 2 3 24 24 H 1.08997 * 109.47028 * 29.72388 * 1 2 3 25 25 H 1.07995 * 120.42568 * 0.02562 * 3 2 1 26 26 H 1.07990 * 119.61067 * 179.97438 * 7 6 4 27 27 H 1.09000 * 109.47834 * 94.24916 * 13 12 9 28 28 H 1.09003 * 109.47446 * 214.24858 * 13 12 9 29 29 H 1.09002 * 109.46853 * 334.24464 * 13 12 9 30 30 H 0.96996 * 120.00676 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2164 1.1909 0.0000 4 6 3.5993 1.1515 0.0057 5 17 4.5002 2.6355 0.0124 6 7 4.2413 -0.0016 0.0002 7 6 3.5981 -1.1529 -0.0054 8 6 2.2167 -1.1912 -0.0061 9 16 1.3676 -2.7351 -0.0129 10 8 0.3834 -2.6473 -1.0342 11 8 2.3682 -3.7436 0.0175 12 7 0.5455 -2.8487 1.4201 13 6 1.1893 -3.4554 2.5878 14 6 -0.7361 -2.3755 1.5137 15 1 -1.3402 -2.2733 0.6244 16 6 -1.2588 -2.0271 2.7515 17 7 -0.4678 -1.9446 3.8003 18 14 -3.0848 -1.6755 2.9291 19 1 -3.8015 -2.9338 3.2580 20 1 -3.2951 -0.6870 4.0172 21 1 -3.6094 -1.1261 1.6530 22 1 -0.3633 -0.0050 1.0277 23 1 -0.3632 -0.8875 -0.5181 24 1 -0.3633 0.8924 -0.5095 25 1 1.6962 2.1373 0.0004 26 1 4.1576 -2.0766 -0.0103 27 1 1.6454 -2.6754 3.1975 28 1 0.4437 -3.9883 3.1780 29 1 1.9579 -4.1539 2.2569 30 1 -0.8328 -1.7009 4.6653 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001192344185.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:47:11 Heat of formation + Delta-G solvation = -36.414130 kcal Electronic energy + Delta-G solvation = -19592.606275 eV Core-core repulsion = 16348.410680 eV Total energy + Delta-G solvation = -3244.195596 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 290.028 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -39.85944 -36.57328 -36.20309 -35.86445 -34.59814 -33.54244 -31.68383 -30.81483 -27.65124 -26.47243 -23.81258 -23.42936 -21.98155 -18.67676 -17.49241 -17.06176 -16.72681 -16.30132 -16.09623 -14.79118 -14.52423 -14.26005 -14.22477 -13.39314 -13.11522 -12.79994 -12.47561 -12.40215 -12.00128 -11.95466 -11.60798 -11.41921 -11.28731 -11.17133 -11.09185 -10.79846 -10.67186 -10.40928 -10.27517 -10.19387 -9.48113 -9.26889 -9.19371 -8.90382 -8.27909 -6.75300 -4.22774 0.92206 1.45605 1.57237 1.91643 2.98873 3.05003 3.07401 3.70869 3.83954 4.29711 4.57949 4.68026 4.87383 5.07328 5.17118 5.30951 5.68971 5.70729 5.92214 6.10528 6.24009 6.32759 6.39533 6.73407 6.75014 6.90511 6.97424 7.05051 7.28849 7.88836 8.06971 8.43671 8.91106 10.18987 Molecular weight = 290.03amu Principal moments of inertia in cm(-1) A = 0.018868 B = 0.006749 C = 0.005787 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1483.619301 B = 4147.592048 C = 4837.687236 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.164 4.164 2 C 0.080 3.920 3 C -0.186 4.186 4 C 0.202 3.798 5 Cl -0.045 7.045 6 N -0.506 5.506 7 C 0.196 3.804 8 C -0.713 4.713 9 S 2.529 3.471 10 O -0.980 6.980 11 O -0.998 6.998 12 N -0.799 5.799 13 C 0.120 3.880 14 C -0.241 4.241 15 H 0.120 0.880 16 C 0.032 3.968 17 N -0.827 5.827 18 Si 0.924 3.076 19 H -0.270 1.270 20 H -0.279 1.279 21 H -0.260 1.260 22 H 0.109 0.891 23 H 0.116 0.884 24 H 0.068 0.932 25 H 0.143 0.857 26 H 0.174 0.826 27 H 0.053 0.947 28 H 0.076 0.924 29 H 0.046 0.954 30 H 0.278 0.722 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.608 4.922 -1.209 5.105 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.220 4.220 2 C 0.071 3.929 3 C -0.208 4.208 4 C 0.039 3.961 5 Cl -0.017 7.017 6 N -0.218 5.218 7 C 0.039 3.961 8 C -0.790 4.790 9 S 2.624 3.376 10 O -0.969 6.969 11 O -0.988 6.988 12 N -0.624 5.624 13 C -0.026 4.026 14 C -0.390 4.390 15 H 0.138 0.862 16 C -0.182 4.182 17 N -0.466 5.466 18 Si 0.749 3.251 19 H -0.196 1.196 20 H -0.204 1.204 21 H -0.184 1.184 22 H 0.127 0.873 23 H 0.134 0.866 24 H 0.087 0.913 25 H 0.160 0.840 26 H 0.191 0.809 27 H 0.072 0.928 28 H 0.095 0.905 29 H 0.065 0.935 30 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges 1.945 4.523 -1.877 5.269 hybrid contribution -1.023 1.364 0.545 1.790 sum 0.922 5.887 -1.332 6.106 Atomic orbital electron populations 1.21845 0.88536 1.05742 1.05862 1.19973 0.97241 0.90434 0.85242 1.21751 0.92424 1.00060 1.06546 1.21688 0.88812 0.88373 0.97244 1.98375 1.76753 1.30143 1.96423 1.67011 1.41447 0.97670 1.15719 1.22419 0.90441 0.94780 0.88467 1.33469 1.06780 1.26177 1.12610 1.12130 0.72519 0.75348 0.77557 1.93309 1.58200 1.86842 1.58544 1.93325 1.60362 1.57391 1.87712 1.54144 1.17314 1.61625 1.29273 1.21361 0.96915 0.96725 0.87557 1.20107 0.84899 1.37984 0.96002 0.86215 1.25805 1.01052 0.95477 0.95820 1.70100 1.35920 1.39743 1.00827 0.85924 0.81134 0.78964 0.79083 1.19560 1.20424 1.18378 0.87317 0.86562 0.91320 0.83955 0.80861 0.92817 0.90507 0.93495 0.91141 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 24. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.91 8.27 36.01 0.30 -2.61 16 2 C 0.08 1.52 5.91 -104.32 -0.62 0.91 16 3 C -0.19 -3.21 9.58 -39.40 -0.38 -3.59 16 4 C 0.20 3.62 7.27 -17.45 -0.13 3.49 16 5 Cl -0.05 -0.67 29.11 -51.86 -1.51 -2.18 16 6 N -0.51 -9.83 10.34 -10.36 -0.11 -9.94 16 7 C 0.20 3.88 10.71 -17.55 -0.19 3.69 16 8 C -0.71 -14.63 5.92 -39.44 -0.23 -14.86 16 9 S 2.53 55.68 5.18 -107.50 -0.56 55.12 16 10 O -0.98 -23.03 14.42 -57.17 -0.82 -23.86 16 11 O -1.00 -23.28 15.56 -57.17 -0.89 -24.17 16 12 N -0.80 -17.58 3.31 -66.69 -0.22 -17.80 16 13 C 0.12 2.52 8.92 59.84 0.53 3.05 16 14 C -0.24 -5.25 6.41 -15.06 -0.10 -5.35 16 15 H 0.12 2.56 6.34 -52.49 -0.33 2.23 16 16 C 0.03 0.68 5.03 -17.43 -0.09 0.59 16 17 N -0.83 -18.19 10.59 55.49 0.59 -17.61 16 18 Si 0.92 16.64 29.57 -169.99 -5.03 11.61 16 19 H -0.27 -4.92 7.11 56.52 0.40 -4.52 16 20 H -0.28 -5.05 7.11 56.52 0.40 -4.65 16 21 H -0.26 -4.56 7.11 56.52 0.40 -4.16 16 22 H 0.11 1.98 6.78 -51.93 -0.35 1.62 16 23 H 0.12 2.26 3.87 -51.93 -0.20 2.06 16 24 H 0.07 0.99 8.10 -51.93 -0.42 0.57 16 25 H 0.14 2.00 8.06 -52.49 -0.42 1.58 16 26 H 0.17 3.16 7.34 -52.49 -0.39 2.78 16 27 H 0.05 1.15 7.41 -51.93 -0.38 0.76 16 28 H 0.08 1.61 7.21 -51.93 -0.37 1.23 16 29 H 0.05 0.92 6.93 -51.93 -0.36 0.56 16 30 H 0.28 5.78 8.31 -40.82 -0.34 5.44 16 LS Contribution 277.77 15.07 4.19 4.19 Total: -1.00 -26.17 277.77 -7.62 -33.79 By element: Atomic # 1 Polarization: 7.88 SS G_CDS: -2.37 Total: 5.51 kcal Atomic # 6 Polarization: -13.77 SS G_CDS: -0.90 Total: -14.67 kcal Atomic # 7 Polarization: -45.61 SS G_CDS: 0.26 Total: -45.35 kcal Atomic # 8 Polarization: -46.31 SS G_CDS: -1.71 Total: -48.03 kcal Atomic # 14 Polarization: 16.64 SS G_CDS: -5.03 Total: 11.61 kcal Atomic # 16 Polarization: 55.68 SS G_CDS: -0.56 Total: 55.12 kcal Atomic # 17 Polarization: -0.67 SS G_CDS: -1.51 Total: -2.18 kcal Total LS contribution 4.19 Total: 4.19 kcal Total: -26.17 -7.62 -33.79 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001192344185.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.620 kcal (2) G-P(sol) polarization free energy of solvation -26.170 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.790 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.624 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.794 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.414 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds