Wall clock time and date at job start Tue Mar 31 2020 05:45:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.36880 * 126.40123 * 2 1 4 4 Cl 1.73597 * 126.59726 * 0.02562 * 3 2 1 5 5 C 1.34791 * 106.80173 * 180.02562 * 3 2 1 6 6 N 1.34162 * 108.01603 * 359.97438 * 5 3 2 7 7 C 1.30470 * 109.27298 * 0.02562 * 6 5 3 8 8 C 1.50698 * 125.64302 * 180.26330 * 7 6 5 9 9 O 1.45190 * 109.47058 * 269.68651 * 8 7 6 10 10 C 1.34232 * 117.00328 * 180.02562 * 9 8 7 11 11 O 1.20826 * 119.99651 * 359.97438 * 10 9 8 12 12 C 1.50694 * 120.00472 * 180.02562 * 10 9 8 13 13 S 1.81002 * 109.47433 * 179.97438 * 12 10 9 14 14 C 1.76196 * 100.00142 * 179.97438 * 13 12 10 15 15 H 1.08000 * 120.00232 * 0.02562 * 14 13 12 16 16 C 1.38798 * 119.99878 * 179.97438 * 14 13 12 17 17 N 1.31631 * 120.00038 * 0.02562 * 16 14 13 18 18 Si 1.86802 * 120.00019 * 180.02562 * 16 14 13 19 19 H 1.48499 * 109.46817 * 0.02562 * 18 16 14 20 20 H 1.48497 * 109.47070 * 120.00082 * 18 16 14 21 21 H 1.48495 * 109.47146 * 240.00223 * 18 16 14 22 22 H 1.08999 * 109.47182 * 269.97164 * 1 2 3 23 23 H 1.09000 * 109.47439 * 29.97882 * 1 2 3 24 24 H 1.09009 * 109.46957 * 149.97306 * 1 2 3 25 25 H 1.08001 * 125.99128 * 179.97438 * 5 3 2 26 26 H 1.09001 * 109.47391 * 29.69041 * 8 7 6 27 27 H 1.09004 * 109.46541 * 149.68772 * 8 7 6 28 28 H 1.08997 * 109.47330 * 299.99787 * 12 10 9 29 29 H 1.09000 * 109.47330 * 59.99760 * 12 10 9 30 30 H 0.97002 * 119.99678 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2773 1.1017 0.0000 4 17 1.7697 2.7618 0.0006 5 6 3.5471 0.6496 -0.0006 6 7 3.5100 -0.6915 -0.0003 7 6 2.2670 -1.0880 -0.0002 8 6 1.8025 -2.5216 0.0057 9 8 1.6480 -2.9859 -1.3613 10 6 1.2366 -4.2521 -1.5320 11 8 1.0135 -4.9496 -0.5710 12 6 1.0542 -4.8042 -2.9223 13 16 0.4972 -6.5234 -2.8205 14 6 0.3684 -6.9053 -4.5358 15 1 0.6094 -6.1562 -5.2754 16 6 -0.0420 -8.1693 -4.9364 17 7 -0.3353 -9.0825 -4.0349 18 14 -0.1780 -8.5745 -6.7548 19 1 0.2057 -7.3851 -7.5569 20 1 0.7300 -9.7038 -7.0796 21 1 -1.5770 -8.9567 -7.0735 22 1 -0.3633 -0.0005 1.0277 23 1 -0.3634 0.8902 -0.5135 24 1 -0.3633 -0.8898 -0.5143 25 1 4.4381 1.2599 -0.0011 26 1 2.5391 -3.1401 0.5185 27 1 0.8458 -2.5913 0.5235 28 1 0.3096 -4.2116 -3.4538 29 1 2.0026 -4.7610 -3.4577 30 1 -0.6224 -9.9658 -4.3149 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000058938075.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:45:58 Heat of formation + Delta-G solvation = -26.342101 kcal Electronic energy + Delta-G solvation = -17572.838818 eV Core-core repulsion = 14329.079978 eV Total energy + Delta-G solvation = -3243.758840 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 290.028 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -42.59332 -40.11854 -37.20826 -36.33121 -34.54360 -32.51799 -31.43799 -29.62139 -27.66657 -26.46300 -25.55873 -21.96489 -21.30656 -20.47839 -18.06563 -17.81591 -17.29571 -16.51429 -16.27815 -15.90649 -15.20199 -14.87557 -14.45441 -14.16770 -13.69535 -13.52618 -13.48570 -13.14431 -12.74215 -12.56339 -12.16154 -12.14050 -11.91635 -11.11886 -11.11548 -10.84774 -10.74238 -10.43098 -10.19544 -10.09126 -9.93226 -9.15462 -8.77145 -8.40652 -6.64641 -6.30825 -4.03823 1.13535 1.26589 2.25762 2.48064 2.52697 2.87611 3.17855 3.23422 3.28154 3.47726 3.97400 4.12015 4.25944 4.44262 4.68090 4.90259 4.98577 5.00822 5.05406 5.11042 5.24580 5.48898 5.62231 5.71503 6.02673 6.06332 6.43847 6.53459 7.52591 7.52778 8.01207 8.27394 9.15078 10.76706 Molecular weight = 290.03amu Principal moments of inertia in cm(-1) A = 0.036485 B = 0.002772 C = 0.002703 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 767.248468 B =10099.655582 C =10358.162659 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.061 3.939 2 N -0.442 5.442 3 C 0.018 3.982 4 Cl -0.005 7.005 5 C 0.010 3.990 6 N -0.455 5.455 7 C 0.224 3.776 8 C 0.153 3.847 9 O -0.357 6.357 10 C 0.483 3.517 11 O -0.484 6.484 12 C -0.128 4.128 13 S -0.057 6.057 14 C -0.536 4.536 15 H 0.077 0.923 16 C 0.074 3.926 17 N -0.867 5.867 18 Si 0.922 3.078 19 H -0.270 1.270 20 H -0.279 1.279 21 H -0.279 1.279 22 H 0.086 0.914 23 H 0.092 0.908 24 H 0.099 0.901 25 H 0.185 0.815 26 H 0.109 0.891 27 H 0.090 0.910 28 H 0.103 0.897 29 H 0.105 0.895 30 H 0.269 0.731 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.062 21.728 8.268 23.339 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 N -0.128 5.128 3 C -0.124 4.124 4 Cl 0.023 6.977 5 C -0.141 4.141 6 N -0.175 5.175 7 C -0.037 4.037 8 C 0.077 3.923 9 O -0.274 6.274 10 C 0.324 3.676 11 O -0.369 6.369 12 C -0.276 4.276 13 S 0.170 5.830 14 C -0.684 4.684 15 H 0.095 0.905 16 C -0.135 4.135 17 N -0.502 5.502 18 Si 0.748 3.252 19 H -0.195 1.195 20 H -0.205 1.205 21 H -0.205 1.205 22 H 0.105 0.895 23 H 0.111 0.889 24 H 0.117 0.883 25 H 0.202 0.798 26 H 0.127 0.873 27 H 0.108 0.892 28 H 0.121 0.879 29 H 0.123 0.877 30 H 0.079 0.921 Dipole moment (debyes) X Y Z Total from point charges 2.180 20.308 9.531 22.539 hybrid contribution -0.703 1.349 -2.103 2.595 sum 1.476 21.657 7.429 22.943 Atomic orbital electron populations 1.22278 0.75443 1.05917 1.04502 1.45147 1.08276 1.05384 1.53944 1.21833 0.91286 0.82499 1.16736 1.98388 1.91732 1.10097 1.97466 1.22252 0.94614 0.90831 1.06434 1.70421 1.18111 1.10906 1.18071 1.22522 0.85587 0.89285 1.06328 1.20899 1.02689 0.85871 0.82871 1.86585 1.79427 1.31517 1.29878 1.23374 0.72914 0.78597 0.92685 1.90689 1.45649 1.58296 1.42225 1.23321 1.06590 1.05660 0.92019 1.85417 1.86582 0.99718 1.11316 1.22880 1.53238 1.01178 0.91116 0.90493 1.25008 0.94385 0.95045 0.99079 1.70018 1.42211 1.04519 1.33457 0.86061 0.78002 0.78559 0.82574 1.19485 1.20467 1.20507 0.89535 0.88899 0.88270 0.79822 0.87279 0.89226 0.87874 0.87655 0.92083 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.41 10.65 59.85 0.64 1.05 16 2 N -0.44 -4.57 3.16 -117.77 -0.37 -4.94 16 3 C 0.02 0.18 7.49 -16.52 -0.12 0.05 16 4 Cl 0.00 -0.04 28.93 -51.86 -1.50 -1.54 16 5 C 0.01 0.11 11.86 -17.76 -0.21 -0.10 16 6 N -0.46 -6.21 11.25 -10.76 -0.12 -6.33 16 7 C 0.22 2.80 7.54 -155.33 -1.17 1.63 16 8 C 0.15 1.92 5.55 36.00 0.20 2.12 16 9 O -0.36 -5.49 10.20 -39.26 -0.40 -5.89 16 10 C 0.48 8.78 7.98 36.00 0.29 9.07 16 11 O -0.48 -9.94 15.61 -18.75 -0.29 -10.23 16 12 C -0.13 -2.52 6.27 36.00 0.23 -2.30 16 13 S -0.06 -1.47 20.57 -107.50 -2.21 -3.68 16 14 C -0.54 -14.79 9.50 30.94 0.29 -14.50 16 15 H 0.08 2.02 7.80 -52.49 -0.41 1.61 16 16 C 0.07 2.06 5.49 -17.43 -0.10 1.97 16 17 N -0.87 -25.40 13.22 55.49 0.73 -24.66 16 18 Si 0.92 20.91 29.55 -169.99 -5.02 15.88 16 19 H -0.27 -5.96 7.11 56.52 0.40 -5.55 16 20 H -0.28 -6.24 7.11 56.52 0.40 -5.84 16 21 H -0.28 -6.23 7.11 56.52 0.40 -5.83 16 22 H 0.09 0.44 8.14 -51.93 -0.42 0.02 16 23 H 0.09 0.52 7.92 -51.93 -0.41 0.11 16 24 H 0.10 0.67 7.67 -51.92 -0.40 0.27 16 25 H 0.18 1.51 8.06 -52.49 -0.42 1.08 16 26 H 0.11 1.38 8.13 -51.93 -0.42 0.95 16 27 H 0.09 0.94 7.71 -51.93 -0.40 0.54 16 28 H 0.10 1.86 8.14 -51.92 -0.42 1.44 16 29 H 0.11 1.96 8.14 -51.92 -0.42 1.54 16 30 H 0.27 7.31 8.31 -40.82 -0.34 6.97 16 LS Contribution 306.20 15.07 4.61 4.61 Total: -1.00 -33.07 306.20 -7.40 -40.47 By element: Atomic # 1 Polarization: 0.18 SS G_CDS: -2.87 Total: -2.69 kcal Atomic # 6 Polarization: -1.04 SS G_CDS: 0.04 Total: -1.00 kcal Atomic # 7 Polarization: -36.18 SS G_CDS: 0.24 Total: -35.94 kcal Atomic # 8 Polarization: -15.43 SS G_CDS: -0.69 Total: -16.12 kcal Atomic # 14 Polarization: 20.91 SS G_CDS: -5.02 Total: 15.88 kcal Atomic # 16 Polarization: -1.47 SS G_CDS: -2.21 Total: -3.68 kcal Atomic # 17 Polarization: -0.04 SS G_CDS: -1.50 Total: -1.54 kcal Total LS contribution 4.61 Total: 4.61 kcal Total: -33.07 -7.40 -40.47 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000058938075.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 14.130 kcal (2) G-P(sol) polarization free energy of solvation -33.073 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -18.943 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.399 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.473 kcal (6) G-S(sol) free energy of system = (1) + (5) -26.342 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds