Wall clock time and date at job start Tue Mar 31 2020 05:50:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 N 1.46494 * 109.47198 * 2 1 4 4 C 1.36888 * 120.00214 * 99.20540 * 3 2 1 5 5 H 1.08002 * 120.00108 * 160.23993 * 4 3 2 6 6 C 1.39003 * 119.99781 * 340.51657 * 4 3 2 7 7 N 1.31398 * 119.99963 * 342.41490 * 6 4 3 8 8 Si 1.86797 * 119.99902 * 162.41885 * 6 4 3 9 9 H 1.48500 * 109.47136 * 359.97438 * 8 6 4 10 10 H 1.48499 * 109.47293 * 119.99883 * 8 6 4 11 11 H 1.48500 * 109.47341 * 239.99928 * 8 6 4 12 12 C 1.34775 * 120.00031 * 279.20364 * 3 2 1 13 13 O 1.21761 * 119.99861 * 178.27030 * 12 3 2 14 14 C 1.46408 * 120.00036 * 358.27446 * 12 3 2 15 15 C 1.38086 * 126.22960 * 9.02075 * 14 12 3 16 16 C 1.39750 * 107.13004 * 179.97438 * 15 14 12 17 17 Cl 1.73602 * 126.05826 * 180.02562 * 16 15 14 18 18 C 1.35763 * 107.88743 * 359.97438 * 16 15 14 19 19 Cl 1.73610 * 125.58014 * 179.97438 * 18 16 15 20 20 N 1.35708 * 108.83944 * 359.75627 * 18 16 15 21 21 C 1.46508 * 125.69783 * 180.24534 * 20 18 16 22 22 H 1.08996 * 109.47316 * 172.66121 * 1 2 3 23 23 H 1.09004 * 109.47080 * 292.66331 * 1 2 3 24 24 H 1.08996 * 109.46792 * 52.65876 * 1 2 3 25 25 H 1.08992 * 109.47261 * 239.99492 * 2 1 3 26 26 H 1.09005 * 109.46728 * 119.99720 * 2 1 3 27 27 H 0.97001 * 120.00123 * 180.02562 * 7 6 4 28 28 H 1.08010 * 126.43445 * 0.02562 * 15 14 12 29 29 H 1.08999 * 109.47001 * 266.37103 * 21 20 18 30 30 H 1.08995 * 109.47273 * 26.37465 * 21 20 18 31 31 H 1.09003 * 109.46464 * 146.37358 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 7 2.0184 1.3811 0.0000 4 6 2.4253 1.9633 1.1702 5 1 3.0679 2.8310 1.1468 6 6 2.0163 1.4341 2.3887 7 7 0.9890 0.6162 2.4381 8 14 2.9268 1.8857 3.9560 9 1 4.0382 2.8158 3.6322 10 1 1.9892 2.5439 4.9010 11 1 3.4771 0.6560 4.5806 12 6 2.0670 2.0787 -1.1522 13 8 2.4431 3.2368 -1.1473 14 6 1.6675 1.4441 -2.4096 15 6 1.0613 0.2108 -2.5448 16 6 0.8579 -0.0004 -3.9112 17 17 0.1269 -1.4008 -4.6311 18 6 1.3323 1.0842 -4.5759 19 17 1.3106 1.3027 -6.2980 20 7 1.8217 1.9717 -3.6734 21 6 2.4183 3.2719 -3.9900 22 1 -0.3634 -1.0192 -0.1313 23 1 -0.3633 0.3960 0.9483 24 1 -0.3633 0.6233 -0.8170 25 1 1.8934 -0.5139 -0.8899 26 1 1.8933 -0.5138 0.8901 27 1 0.7033 0.2471 3.2884 28 1 0.7938 -0.4637 -1.7446 29 1 3.4998 3.1648 -4.0731 30 1 2.0156 3.6359 -4.9352 31 1 2.1833 3.9821 -3.1972 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000068240803.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:50:52 Heat of formation + Delta-G solvation = 41.071106 kcal Electronic energy + Delta-G solvation = -19281.037646 eV Core-core repulsion = 16038.158356 eV Total energy + Delta-G solvation = -3242.879290 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 290.033 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -41.18527 -38.28634 -36.57727 -36.23567 -35.39152 -32.87957 -31.72353 -30.01409 -28.49982 -26.17234 -25.12050 -22.53975 -21.49273 -20.68892 -18.95194 -17.27734 -16.69089 -15.93991 -15.45792 -14.88099 -14.32345 -14.05811 -13.93294 -13.68969 -13.55318 -12.89811 -12.72645 -12.13833 -12.00468 -11.71493 -11.58773 -11.32891 -11.23214 -11.16836 -10.97008 -10.81429 -10.57364 -10.42258 -10.23114 -9.91966 -9.10670 -8.66763 -8.33143 -7.82798 -7.77560 -6.46716 -3.99777 1.74015 1.79822 2.36353 2.65980 3.10122 3.17464 3.22848 3.33571 4.00765 4.16996 4.71255 4.99814 5.02405 5.36160 5.48092 5.48684 5.80568 6.02666 6.08931 6.13655 6.48400 6.53976 6.70814 6.74419 7.01728 7.15510 7.19496 7.32090 7.76857 7.95059 8.35861 9.00068 9.21330 9.79423 10.48875 Molecular weight = 290.03amu Principal moments of inertia in cm(-1) A = 0.026584 B = 0.005259 C = 0.004479 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1053.021556 B = 5323.288603 C = 6250.517289 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C 0.102 3.898 3 N -0.406 5.406 4 C -0.299 4.299 5 H 0.105 0.895 6 C 0.033 3.967 7 N -0.859 5.859 8 Si 0.929 3.071 9 H -0.267 1.267 10 H -0.280 1.280 11 H -0.278 1.278 12 C 0.494 3.506 13 O -0.599 6.599 14 C 0.034 3.966 15 C -0.177 4.177 16 C -0.093 4.093 17 Cl -0.049 7.049 18 C 0.064 3.936 19 Cl -0.020 7.020 20 N -0.403 5.403 21 C 0.068 3.932 22 H 0.041 0.959 23 H 0.107 0.893 24 H 0.039 0.961 25 H 0.059 0.941 26 H 0.094 0.906 27 H 0.271 0.729 28 H 0.194 0.806 29 H 0.077 0.923 30 H 0.078 0.922 31 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.574 -2.903 -10.299 10.715 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.228 4.228 2 C -0.022 4.022 3 N -0.122 5.122 4 C -0.428 4.428 5 H 0.123 0.877 6 C -0.172 4.172 7 N -0.497 5.497 8 Si 0.756 3.244 9 H -0.191 1.191 10 H -0.206 1.206 11 H -0.204 1.204 12 C 0.283 3.717 13 O -0.487 6.487 14 C -0.082 4.082 15 C -0.201 4.201 16 C -0.129 4.129 17 Cl -0.020 7.020 18 C -0.078 4.078 19 Cl 0.008 6.992 20 N -0.080 5.080 21 C -0.072 4.072 22 H 0.060 0.940 23 H 0.126 0.874 24 H 0.058 0.942 25 H 0.076 0.924 26 H 0.113 0.887 27 H 0.081 0.919 28 H 0.210 0.790 29 H 0.095 0.905 30 H 0.097 0.903 31 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges -0.386 -2.207 -10.392 10.631 hybrid contribution 0.178 -0.023 0.307 0.355 sum -0.209 -2.230 -10.085 10.331 Atomic orbital electron populations 1.22486 0.95974 0.99632 1.04747 1.21979 0.95077 0.83523 1.01574 1.43475 1.52327 1.10758 1.05607 1.19805 1.27213 1.14116 0.81619 0.87687 1.25398 0.95384 0.96814 0.99594 1.69963 1.21726 1.31196 1.26792 0.85812 0.79560 0.78521 0.80555 1.19114 1.20589 1.20415 1.16505 0.86994 0.85888 0.82275 1.90613 1.54922 1.16857 1.86282 1.20716 1.07443 0.94730 0.85285 1.22690 1.05004 0.97637 0.94782 1.19641 1.09715 0.90570 0.92927 1.98296 1.81610 1.38952 1.83180 1.20419 1.11240 0.93293 0.82855 1.98350 1.97653 1.97161 1.06022 1.43712 1.44780 1.15103 1.04395 1.22312 0.98884 0.82448 1.03600 0.94023 0.87437 0.94233 0.92372 0.88736 0.91877 0.78985 0.90480 0.90327 0.86762 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -3.44 8.09 37.16 0.30 -3.14 16 2 C 0.10 2.16 4.78 -4.04 -0.02 2.14 16 3 N -0.41 -9.97 2.64 -116.39 -0.31 -10.28 16 4 C -0.30 -7.82 9.30 -15.01 -0.14 -7.96 16 5 H 0.11 2.88 7.40 -52.49 -0.39 2.49 16 6 C 0.03 0.80 4.95 -17.45 -0.09 0.71 16 7 N -0.86 -20.65 8.42 55.50 0.47 -20.18 16 8 Si 0.93 19.28 29.59 -169.99 -5.03 14.25 16 9 H -0.27 -5.60 7.11 56.52 0.40 -5.20 16 10 H -0.28 -5.82 7.11 56.52 0.40 -5.42 16 11 H -0.28 -5.66 7.11 56.52 0.40 -5.26 16 12 C 0.49 11.97 7.44 -12.97 -0.10 11.87 16 13 O -0.60 -15.80 14.41 5.13 0.07 -15.73 16 14 C 0.03 0.69 6.62 -81.94 -0.54 0.15 16 15 C -0.18 -3.29 7.28 -39.07 -0.28 -3.57 16 16 C -0.09 -1.60 6.66 -39.90 -0.27 -1.86 16 17 Cl -0.05 -0.72 29.12 -51.86 -1.51 -2.23 16 18 C 0.06 1.06 7.39 -16.72 -0.12 0.94 16 19 Cl -0.02 -0.27 28.42 -51.86 -1.47 -1.75 16 20 N -0.40 -7.29 3.17 -116.61 -0.37 -7.66 16 21 C 0.07 1.04 10.44 59.85 0.63 1.67 16 22 H 0.04 0.72 8.09 -51.93 -0.42 0.30 16 23 H 0.11 2.45 5.75 -51.93 -0.30 2.15 16 24 H 0.04 0.80 6.21 -51.93 -0.32 0.48 16 25 H 0.06 1.13 4.90 -51.93 -0.25 0.87 16 26 H 0.09 2.13 6.23 -51.93 -0.32 1.81 16 27 H 0.27 6.14 8.31 -40.82 -0.34 5.80 16 28 H 0.19 3.46 3.15 -52.48 -0.17 3.30 16 29 H 0.08 1.09 8.14 -51.93 -0.42 0.67 16 30 H 0.08 0.97 7.63 -51.93 -0.40 0.57 16 31 H 0.11 1.97 6.38 -51.93 -0.33 1.64 16 LS Contribution 282.25 15.07 4.25 4.25 Total: -1.00 -27.20 282.25 -6.99 -34.18 By element: Atomic # 1 Polarization: 6.65 SS G_CDS: -2.46 Total: 4.19 kcal Atomic # 6 Polarization: 1.58 SS G_CDS: -0.63 Total: 0.95 kcal Atomic # 7 Polarization: -37.91 SS G_CDS: -0.21 Total: -38.12 kcal Atomic # 8 Polarization: -15.80 SS G_CDS: 0.07 Total: -15.73 kcal Atomic # 14 Polarization: 19.28 SS G_CDS: -5.03 Total: 14.25 kcal Atomic # 17 Polarization: -0.99 SS G_CDS: -2.98 Total: -3.98 kcal Total LS contribution 4.25 Total: 4.25 kcal Total: -27.20 -6.99 -34.18 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000068240803.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 75.253 kcal (2) G-P(sol) polarization free energy of solvation -27.195 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 48.058 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.986 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.182 kcal (6) G-S(sol) free energy of system = (1) + (5) 41.071 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds