Wall clock time and date at job start Tue Mar 31 2020 05:50:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 H 1.09004 * 109.46704 * 2 1 4 4 C 1.50697 * 109.47232 * 119.99820 * 2 1 3 5 5 H 1.08000 * 120.00039 * 120.00405 * 4 2 1 6 6 C 1.37879 * 120.00123 * 300.00557 * 4 2 1 7 7 N 1.31514 * 119.99917 * 359.97438 * 6 4 2 8 8 Si 1.86801 * 119.99863 * 180.02562 * 6 4 2 9 9 H 1.48500 * 109.47313 * 89.99751 * 8 6 4 10 10 H 1.48496 * 109.47060 * 209.99630 * 8 6 4 11 11 H 1.48500 * 109.47089 * 329.99803 * 8 6 4 12 12 N 1.46492 * 109.47164 * 240.00226 * 2 1 3 13 13 C 1.46493 * 120.00102 * 299.99715 * 12 2 1 14 14 C 1.34783 * 120.00150 * 119.99609 * 12 2 1 15 15 O 1.21718 * 119.99829 * 0.02562 * 14 12 2 16 16 C 1.46538 * 120.00369 * 179.97438 * 14 12 2 17 17 C 1.37963 * 126.22459 * 189.61355 * 16 14 12 18 18 C 1.39789 * 107.12526 * 179.84519 * 17 16 14 19 19 Cl 1.73606 * 126.06100 * 180.15336 * 18 17 16 20 20 C 1.35720 * 107.88020 * 0.41826 * 18 17 16 21 21 Cl 1.73599 * 125.58686 * 179.71600 * 20 18 17 22 22 N 1.35664 * 108.82930 * 359.73834 * 20 18 17 23 23 H 0.96996 * 125.69412 * 179.97438 * 22 20 18 24 24 H 1.09004 * 109.46704 * 179.97438 * 1 2 3 25 25 H 1.08999 * 109.47516 * 60.00375 * 1 2 3 26 26 H 1.09001 * 109.47374 * 299.99539 * 1 2 3 27 27 H 0.97005 * 119.99727 * 180.02562 * 7 6 4 28 28 H 1.09000 * 109.47610 * 96.26678 * 13 12 2 29 29 H 1.09009 * 109.47390 * 216.26854 * 13 12 2 30 30 H 1.08999 * 109.47199 * 336.26494 * 13 12 2 31 31 H 1.07991 * 126.43530 * 359.96267 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0323 -0.7103 1.2304 5 1 2.6533 -1.5884 1.1314 6 6 1.6992 -0.2393 2.4827 7 7 0.9434 0.8302 2.6034 8 14 2.3225 -1.1195 4.0079 9 1 3.6305 -0.5439 4.4119 10 1 1.3445 -0.9490 5.1123 11 1 2.4881 -2.5653 3.7121 12 7 2.0183 -0.6905 -1.1961 13 6 1.6645 -2.0930 -1.4280 14 6 2.7931 -0.0355 -2.0834 15 8 3.0875 1.1297 -1.8905 16 6 3.2821 -0.7263 -3.2796 17 6 4.2229 -0.2497 -4.1690 18 6 4.3914 -1.2278 -5.1534 19 17 5.4667 -1.1346 -6.5132 20 6 3.5612 -2.2608 -4.8609 21 17 3.3956 -3.7181 -5.7897 22 7 2.8814 -1.9678 -3.7239 23 1 2.2231 -2.5369 -3.2956 24 1 -0.3633 -1.0277 -0.0005 25 1 -0.3634 0.5138 -0.8900 26 1 -0.3634 0.5138 0.8900 27 1 0.7093 1.1617 3.4844 28 1 0.8015 -2.1452 -2.0918 29 1 2.5076 -2.6094 -1.8871 30 1 1.4212 -2.5683 -0.4777 31 1 4.7345 0.6997 -4.1140 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000103442491.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:50:35 Heat of formation + Delta-G solvation = 16.745480 kcal Electronic energy + Delta-G solvation = -18654.681680 eV Core-core repulsion = 15410.747551 eV Total energy + Delta-G solvation = -3243.934129 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 290.033 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -41.61843 -38.76502 -36.94885 -36.52281 -35.66867 -33.15952 -31.31087 -30.01888 -28.49500 -26.67252 -25.33692 -23.12084 -21.26382 -20.50946 -19.90855 -17.55683 -16.69851 -16.24573 -15.46197 -15.43193 -14.77269 -14.39168 -14.29724 -13.77715 -13.36353 -13.10492 -12.78411 -12.67579 -12.04475 -11.98383 -11.70684 -11.69512 -11.50934 -11.15135 -10.97253 -10.95774 -10.83487 -10.37702 -10.28698 -9.47563 -9.30430 -9.05478 -8.53725 -8.31728 -7.84155 -6.17928 -4.27027 1.30305 1.35642 2.05098 2.22274 3.15740 3.21233 3.28449 3.29012 3.60261 3.76656 4.30728 4.71827 4.88040 5.10312 5.13963 5.39391 5.49734 5.63823 5.97984 6.19506 6.39773 6.61319 6.67615 6.87494 6.91126 7.19444 7.35460 7.57856 7.86857 8.03349 8.26214 8.62713 8.80173 9.39881 10.87434 Molecular weight = 290.03amu Principal moments of inertia in cm(-1) A = 0.027464 B = 0.003992 C = 0.003835 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1019.272346 B = 7012.901497 C = 7298.749436 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C 0.258 3.742 3 H 0.068 0.932 4 C -0.532 4.532 5 H 0.060 0.940 6 C 0.067 3.933 7 N -0.885 5.885 8 Si 0.900 3.100 9 H -0.279 1.279 10 H -0.285 1.285 11 H -0.274 1.274 12 N -0.585 5.585 13 C 0.061 3.939 14 C 0.575 3.425 15 O -0.527 6.527 16 C 0.006 3.994 17 C -0.102 4.102 18 C -0.095 4.095 19 Cl -0.037 7.037 20 C 0.080 3.920 21 Cl -0.006 7.006 22 N -0.527 5.527 23 H 0.432 0.568 24 H 0.030 0.970 25 H 0.013 0.987 26 H 0.096 0.904 27 H 0.265 0.735 28 H 0.049 0.951 29 H 0.055 0.945 30 H 0.100 0.900 31 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.775 -8.584 -14.544 17.115 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C 0.159 3.841 3 H 0.086 0.914 4 C -0.570 4.570 5 H 0.078 0.922 6 C -0.136 4.136 7 N -0.523 5.523 8 Si 0.728 3.272 9 H -0.205 1.205 10 H -0.211 1.211 11 H -0.199 1.199 12 N -0.316 5.316 13 C -0.083 4.083 14 C 0.361 3.639 15 O -0.403 6.403 16 C -0.109 4.109 17 C -0.128 4.128 18 C -0.130 4.130 19 Cl -0.009 7.009 20 C -0.064 4.064 21 Cl 0.022 6.978 22 N -0.136 5.136 23 H 0.282 0.718 24 H 0.049 0.951 25 H 0.032 0.968 26 H 0.115 0.885 27 H 0.075 0.925 28 H 0.067 0.933 29 H 0.073 0.927 30 H 0.119 0.881 31 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges 2.739 -8.054 -14.331 16.666 hybrid contribution 0.044 -1.137 0.767 1.373 sum 2.784 -9.192 -13.564 16.620 Atomic orbital electron populations 1.22109 0.97830 0.99501 1.01134 1.19070 0.91067 0.94660 0.79319 0.91392 1.21269 1.32278 1.13308 0.90170 0.92176 1.24884 0.94756 0.94939 0.99009 1.69871 1.35966 1.22420 1.23994 0.86465 0.78750 0.79785 0.82214 1.20476 1.21050 1.19937 1.48229 1.48530 1.11045 1.23782 1.22007 0.98111 0.84268 1.03940 1.16905 0.79666 0.86180 0.81157 1.90843 1.58284 1.15448 1.75767 1.20949 1.03731 0.86173 1.00041 1.21104 0.99384 0.99979 0.92351 1.19597 1.01228 0.96292 0.95926 1.98329 1.62634 1.98199 1.41705 1.20610 1.01750 0.92137 0.91895 1.98401 1.97186 1.32746 1.69460 1.43359 1.33990 1.16800 1.19494 0.71802 0.95133 0.96819 0.88526 0.92503 0.93292 0.92709 0.88138 0.81668 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.32 8.97 37.16 0.33 -2.99 16 2 C 0.26 6.25 2.63 -69.09 -0.18 6.07 16 3 H 0.07 1.92 6.90 -51.93 -0.36 1.56 16 4 C -0.53 -13.66 7.95 -34.44 -0.27 -13.93 16 5 H 0.06 1.51 7.44 -52.49 -0.39 1.12 16 6 C 0.07 1.76 5.30 -17.82 -0.09 1.66 16 7 N -0.88 -24.09 11.32 55.43 0.63 -23.46 16 8 Si 0.90 20.29 29.54 -169.99 -5.02 15.27 16 9 H -0.28 -6.37 7.11 56.52 0.40 -5.97 16 10 H -0.28 -6.37 7.11 56.52 0.40 -5.97 16 11 H -0.27 -6.04 7.11 56.52 0.40 -5.64 16 12 N -0.59 -11.70 2.75 -176.86 -0.49 -12.19 16 13 C 0.06 0.91 7.81 59.84 0.47 1.38 16 14 C 0.57 11.58 7.64 -12.91 -0.10 11.48 16 15 O -0.53 -12.54 16.22 5.17 0.08 -12.46 16 16 C 0.01 0.09 6.65 -81.93 -0.55 -0.45 16 17 C -0.10 -1.53 10.65 -39.10 -0.42 -1.94 16 18 C -0.10 -1.28 6.66 -39.90 -0.27 -1.54 16 19 Cl -0.04 -0.44 29.12 -51.86 -1.51 -1.95 16 20 C 0.08 1.00 7.75 -16.76 -0.13 0.87 16 21 Cl -0.01 -0.06 29.13 -51.86 -1.51 -1.58 16 22 N -0.53 -6.78 5.06 -6.51 -0.03 -6.82 16 23 H 0.43 4.68 4.92 -40.82 -0.20 4.48 16 24 H 0.03 0.62 7.67 -51.93 -0.40 0.22 16 25 H 0.01 0.27 8.14 -51.93 -0.42 -0.15 16 26 H 0.10 2.42 6.07 -51.93 -0.32 2.10 16 27 H 0.26 6.88 8.31 -40.82 -0.34 6.54 16 28 H 0.05 0.60 7.72 -51.93 -0.40 0.20 16 29 H 0.05 0.69 5.18 -51.92 -0.27 0.42 16 30 H 0.10 1.58 7.12 -51.93 -0.37 1.21 16 31 H 0.17 2.36 8.06 -52.49 -0.42 1.94 16 LS Contribution 294.02 15.07 4.43 4.43 Total: -1.00 -28.77 294.02 -7.31 -36.08 By element: Atomic # 1 Polarization: 4.76 SS G_CDS: -2.68 Total: 2.08 kcal Atomic # 6 Polarization: 1.80 SS G_CDS: -1.21 Total: 0.59 kcal Atomic # 7 Polarization: -42.57 SS G_CDS: 0.11 Total: -42.47 kcal Atomic # 8 Polarization: -12.54 SS G_CDS: 0.08 Total: -12.46 kcal Atomic # 14 Polarization: 20.29 SS G_CDS: -5.02 Total: 15.27 kcal Atomic # 17 Polarization: -0.51 SS G_CDS: -3.02 Total: -3.53 kcal Total LS contribution 4.43 Total: 4.43 kcal Total: -28.77 -7.31 -36.08 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000103442491.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 52.822 kcal (2) G-P(sol) polarization free energy of solvation -28.769 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.053 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.307 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.077 kcal (6) G-S(sol) free energy of system = (1) + (5) 16.745 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds