Wall clock time and date at job start Tue Mar 31 2020 05:50:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 H 1.09006 * 109.47203 * 2 1 4 4 C 1.50694 * 109.47059 * 239.99787 * 2 1 3 5 5 H 1.08009 * 119.99843 * 240.00114 * 4 2 1 6 6 C 1.37873 * 120.00154 * 60.00223 * 4 2 1 7 7 N 1.31515 * 120.00052 * 0.02562 * 6 4 2 8 8 Si 1.86803 * 119.99939 * 179.97438 * 6 4 2 9 9 H 1.48497 * 109.47144 * 359.97438 * 8 6 4 10 10 H 1.48494 * 109.47289 * 120.00217 * 8 6 4 11 11 H 1.48506 * 109.46988 * 240.00107 * 8 6 4 12 12 N 1.46500 * 109.46792 * 119.99620 * 2 1 3 13 13 C 1.46508 * 119.99930 * 60.00164 * 12 2 1 14 14 C 1.34775 * 119.99980 * 239.99845 * 12 2 1 15 15 O 1.21708 * 120.00148 * 0.81561 * 14 12 2 16 16 C 1.46545 * 119.99941 * 180.81160 * 14 12 2 17 17 C 1.37960 * 126.22373 * 168.56388 * 16 14 12 18 18 C 1.39791 * 107.12943 * 179.97438 * 17 16 14 19 19 Cl 1.73596 * 126.06405 * 179.97438 * 18 17 16 20 20 C 1.35720 * 107.87628 * 0.02562 * 18 17 16 21 21 Cl 1.73605 * 125.58780 * 179.97438 * 20 18 17 22 22 N 1.35665 * 108.83201 * 0.25787 * 20 18 17 23 23 H 0.96998 * 125.69919 * 179.73789 * 22 20 18 24 24 H 1.08999 * 109.47175 * 300.00691 * 1 2 3 25 25 H 1.09001 * 109.46784 * 60.00275 * 1 2 3 26 26 H 1.08997 * 109.47390 * 179.97438 * 1 2 3 27 27 H 0.96998 * 119.99970 * 179.97438 * 7 6 4 28 28 H 1.08993 * 109.47085 * 263.46053 * 13 12 2 29 29 H 1.08998 * 109.46784 * 23.45766 * 13 12 2 30 30 H 1.08998 * 109.46945 * 143.45911 * 13 12 2 31 31 H 1.07994 * 126.43317 * 359.93515 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0323 -0.7104 -1.2304 5 1 2.6532 -1.5886 -1.1312 6 6 1.6993 -0.2394 -2.4827 7 7 0.9436 0.8302 -2.6034 8 14 2.3225 -1.1197 -4.0078 9 1 3.1484 -2.2858 -3.6036 10 1 1.1679 -1.5867 -4.8164 11 1 3.1474 -0.1859 -4.8160 12 7 2.0182 -0.6905 1.1962 13 6 1.6643 -2.0932 1.4281 14 6 2.7931 -0.0355 2.0834 15 8 3.0749 1.1339 1.8983 16 6 3.2961 -0.7314 3.2709 17 6 4.2640 -0.2684 4.1382 18 6 4.4344 -1.2447 5.1241 19 17 5.5368 -1.1638 6.4627 20 6 3.5859 -2.2675 4.8487 21 17 3.4202 -3.7220 5.7819 22 7 2.8928 -1.9699 3.7210 23 1 2.2232 -2.5335 3.3029 24 1 -0.3633 0.5139 0.8899 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3634 -1.0276 -0.0005 27 1 0.7096 1.1617 -3.4844 28 1 0.8042 -2.1453 2.0957 29 1 1.4162 -2.5670 0.4784 30 1 2.5090 -2.6107 1.8828 31 1 4.7914 0.6714 4.0683 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000103442492.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:50:37 Heat of formation + Delta-G solvation = 16.303153 kcal Electronic energy + Delta-G solvation = -18654.961648 eV Core-core repulsion = 15411.008339 eV Total energy + Delta-G solvation = -3243.953309 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 290.033 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -41.61651 -38.76641 -36.94824 -36.52304 -35.66709 -33.15821 -31.30931 -30.02090 -28.49492 -26.66827 -25.33886 -23.12100 -21.26240 -20.51080 -19.90704 -17.55939 -16.69721 -16.25153 -15.46078 -15.43140 -14.77141 -14.38734 -14.30178 -13.77831 -13.36333 -13.10334 -12.77993 -12.68092 -12.04494 -11.98737 -11.70453 -11.69945 -11.51099 -11.16566 -10.95871 -10.95382 -10.83223 -10.37685 -10.29258 -9.47385 -9.29576 -9.05377 -8.54426 -8.31650 -7.84073 -6.18199 -4.27238 1.30358 1.35801 2.05130 2.22345 3.15735 3.19704 3.28443 3.30471 3.59443 3.77131 4.30594 4.72043 4.88074 5.11024 5.13787 5.39390 5.49825 5.63897 5.98120 6.19547 6.39760 6.61387 6.67569 6.87466 6.91151 7.19426 7.35464 7.57916 7.86916 8.03179 8.26173 8.62662 8.80278 9.39781 10.87205 Molecular weight = 290.03amu Principal moments of inertia in cm(-1) A = 0.027290 B = 0.003995 C = 0.003844 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1025.777287 B = 7007.584104 C = 7281.500944 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C 0.258 3.742 3 H 0.068 0.932 4 C -0.531 4.531 5 H 0.061 0.939 6 C 0.067 3.933 7 N -0.885 5.885 8 Si 0.900 3.100 9 H -0.273 1.273 10 H -0.283 1.283 11 H -0.282 1.282 12 N -0.585 5.585 13 C 0.061 3.939 14 C 0.575 3.425 15 O -0.527 6.527 16 C 0.006 3.994 17 C -0.102 4.102 18 C -0.095 4.095 19 Cl -0.037 7.037 20 C 0.080 3.920 21 Cl -0.006 7.006 22 N -0.526 5.526 23 H 0.432 0.568 24 H 0.013 0.987 25 H 0.096 0.904 26 H 0.030 0.970 27 H 0.264 0.736 28 H 0.049 0.951 29 H 0.100 0.900 30 H 0.055 0.945 31 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.864 -8.620 14.507 17.116 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C 0.159 3.841 3 H 0.086 0.914 4 C -0.570 4.570 5 H 0.079 0.921 6 C -0.136 4.136 7 N -0.522 5.522 8 Si 0.728 3.272 9 H -0.198 1.198 10 H -0.209 1.209 11 H -0.208 1.208 12 N -0.316 5.316 13 C -0.083 4.083 14 C 0.361 3.639 15 O -0.403 6.403 16 C -0.109 4.109 17 C -0.128 4.128 18 C -0.130 4.130 19 Cl -0.009 7.009 20 C -0.064 4.064 21 Cl 0.022 6.978 22 N -0.136 5.136 23 H 0.282 0.718 24 H 0.032 0.968 25 H 0.115 0.885 26 H 0.049 0.951 27 H 0.074 0.926 28 H 0.067 0.933 29 H 0.119 0.881 30 H 0.073 0.927 31 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges 2.831 -8.089 14.301 16.672 hybrid contribution 0.027 -1.130 -0.770 1.368 sum 2.858 -9.219 13.530 16.620 Atomic orbital electron populations 1.22107 0.97830 0.99504 1.01140 1.19078 0.91080 0.94666 0.79323 0.91386 1.21310 1.32221 1.13274 0.90157 0.92115 1.24885 0.94778 0.94926 0.99021 1.69879 1.36066 1.22409 1.23891 0.86415 0.78625 0.79593 0.82616 1.19808 1.20877 1.20773 1.48235 1.48502 1.11068 1.23777 1.22005 0.98131 0.84257 1.03927 1.16903 0.79663 0.86229 0.81108 1.90840 1.58725 1.15123 1.75660 1.20952 1.03270 0.86345 1.00309 1.21102 0.99022 1.00069 0.92644 1.19594 1.00483 0.96624 0.96331 1.98328 1.60816 1.98258 1.43455 1.20608 1.01348 0.92300 0.92135 1.98401 1.97218 1.32956 1.69221 1.43331 1.33307 1.16936 1.20026 0.71841 0.96807 0.88535 0.95130 0.92558 0.93311 0.88149 0.92699 0.81675 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.32 8.97 37.16 0.33 -2.99 16 2 C 0.26 6.24 2.63 -69.09 -0.18 6.06 16 3 H 0.07 1.92 6.90 -51.93 -0.36 1.56 16 4 C -0.53 -13.64 7.95 -34.44 -0.27 -13.91 16 5 H 0.06 1.53 7.45 -52.48 -0.39 1.14 16 6 C 0.07 1.75 5.30 -17.82 -0.09 1.66 16 7 N -0.88 -24.08 11.32 55.43 0.63 -23.45 16 8 Si 0.90 20.28 29.54 -169.99 -5.02 15.26 16 9 H -0.27 -6.08 7.11 56.52 0.40 -5.68 16 10 H -0.28 -6.29 7.11 56.52 0.40 -5.88 16 11 H -0.28 -6.43 7.11 56.52 0.40 -6.03 16 12 N -0.59 -11.70 2.75 -176.86 -0.49 -12.19 16 13 C 0.06 0.91 7.81 59.85 0.47 1.38 16 14 C 0.58 11.58 7.64 -12.91 -0.10 11.48 16 15 O -0.53 -12.54 16.23 5.18 0.08 -12.46 16 16 C 0.01 0.09 6.64 -81.93 -0.54 -0.45 16 17 C -0.10 -1.53 10.66 -39.10 -0.42 -1.95 16 18 C -0.10 -1.27 6.66 -39.90 -0.27 -1.54 16 19 Cl -0.04 -0.44 29.12 -51.86 -1.51 -1.95 16 20 C 0.08 1.00 7.75 -16.76 -0.13 0.87 16 21 Cl -0.01 -0.07 29.13 -51.86 -1.51 -1.58 16 22 N -0.53 -6.78 5.05 -6.51 -0.03 -6.81 16 23 H 0.43 4.68 4.96 -40.82 -0.20 4.47 16 24 H 0.01 0.28 8.14 -51.93 -0.42 -0.15 16 25 H 0.10 2.41 6.07 -51.93 -0.32 2.10 16 26 H 0.03 0.62 7.67 -51.93 -0.40 0.23 16 27 H 0.26 6.84 8.31 -40.82 -0.34 6.50 16 28 H 0.05 0.60 7.71 -51.93 -0.40 0.20 16 29 H 0.10 1.58 7.13 -51.93 -0.37 1.21 16 30 H 0.05 0.69 5.20 -51.93 -0.27 0.42 16 31 H 0.17 2.36 8.06 -52.49 -0.42 1.94 16 LS Contribution 294.06 15.07 4.43 4.43 Total: -1.00 -28.80 294.06 -7.31 -36.11 By element: Atomic # 1 Polarization: 4.72 SS G_CDS: -2.69 Total: 2.03 kcal Atomic # 6 Polarization: 1.80 SS G_CDS: -1.20 Total: 0.60 kcal Atomic # 7 Polarization: -42.56 SS G_CDS: 0.11 Total: -42.45 kcal Atomic # 8 Polarization: -12.54 SS G_CDS: 0.08 Total: -12.46 kcal Atomic # 14 Polarization: 20.28 SS G_CDS: -5.02 Total: 15.26 kcal Atomic # 17 Polarization: -0.50 SS G_CDS: -3.02 Total: -3.53 kcal Total LS contribution 4.43 Total: 4.43 kcal Total: -28.80 -7.31 -36.11 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000103442492.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 52.413 kcal (2) G-P(sol) polarization free energy of solvation -28.802 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 23.611 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.308 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.110 kcal (6) G-S(sol) free energy of system = (1) + (5) 16.303 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds