Wall clock time and date at job start Tue Mar 31 2020 05:46:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34227 * 116.99990 * 2 1 4 4 O 1.20828 * 120.00182 * 359.97438 * 3 2 1 5 5 C 1.50698 * 120.00080 * 180.02562 * 3 2 1 6 6 N 1.46499 * 109.47224 * 179.97438 * 5 3 2 7 7 C 1.36932 * 120.00457 * 96.09416 * 6 5 3 8 8 H 1.07999 * 120.00454 * 163.11911 * 7 6 5 9 9 C 1.38816 * 119.99565 * 342.83728 * 7 6 5 10 10 N 1.31613 * 120.00378 * 336.49835 * 9 7 6 11 11 Si 1.86805 * 119.99843 * 156.49315 * 9 7 6 12 12 H 1.48500 * 109.46721 * 90.00219 * 11 9 7 13 13 H 1.48492 * 109.47086 * 210.00354 * 11 9 7 14 14 H 1.48500 * 109.47137 * 330.00461 * 11 9 7 15 15 C 1.46505 * 119.99760 * 276.08728 * 6 5 3 16 16 C 1.50700 * 109.47375 * 270.00201 * 15 6 5 17 17 C 1.33567 * 126.02204 * 90.00161 * 16 15 6 18 18 N 1.31862 * 114.51406 * 180.02562 * 17 16 15 19 19 C 1.29136 * 117.07733 * 359.97438 * 18 17 16 20 20 Cl 1.73602 * 124.92543 * 180.02562 * 19 18 17 21 21 S 1.70980 * 110.15394 * 359.72652 * 19 18 17 22 22 H 1.09000 * 109.46891 * 60.00532 * 1 2 3 23 23 H 1.08997 * 109.46659 * 180.02562 * 1 2 3 24 24 H 1.09005 * 109.47022 * 300.00185 * 1 2 3 25 25 H 1.09002 * 109.47497 * 59.99189 * 5 3 2 26 26 H 1.09006 * 109.47191 * 299.99108 * 5 3 2 27 27 H 0.96999 * 120.00616 * 179.97438 * 10 9 7 28 28 H 1.09000 * 109.46571 * 30.00119 * 15 6 5 29 29 H 1.09000 * 109.47195 * 150.00095 * 15 6 5 30 30 H 1.08002 * 122.73972 * 359.96071 * 17 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2749 -0.0006 6 7 3.9817 2.6797 -0.0011 7 6 4.2970 3.3010 1.1778 8 1 4.8543 4.2260 1.1685 9 6 3.8952 2.7448 2.3845 10 7 2.8641 1.9276 2.4216 11 14 4.8180 3.1560 3.9557 12 1 4.2082 4.3528 4.5890 13 1 4.7387 2.0060 4.8918 14 1 6.2407 3.4363 3.6353 15 6 4.0599 3.4200 -1.2629 16 6 5.4414 3.2732 -1.8468 17 6 5.8411 2.3156 -2.6878 18 7 7.1038 2.4040 -3.0572 19 6 7.7905 3.3848 -2.5735 20 17 9.4627 3.6945 -2.9221 21 16 6.8119 4.3390 -1.5463 22 1 -0.3633 0.5138 -0.8900 23 1 -0.3632 -1.0277 0.0005 24 1 -0.3633 0.5139 0.8900 25 1 3.9558 0.7808 -0.8907 26 1 3.9564 0.7807 0.8893 27 1 2.5836 1.5387 3.2647 28 1 3.3253 3.0225 -1.9633 29 1 3.8533 4.4743 -1.0791 30 1 5.1840 1.5324 -3.0359 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000175449381.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:46:52 Heat of formation + Delta-G solvation = -14.292391 kcal Electronic energy + Delta-G solvation = -18790.642017 eV Core-core repulsion = 15547.405692 eV Total energy + Delta-G solvation = -3243.236325 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 290.028 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -39.41833 -39.03868 -36.80207 -36.17733 -34.73997 -32.18101 -30.12911 -28.21721 -26.41761 -25.95339 -24.19547 -22.00943 -19.91402 -19.88483 -18.00609 -17.07875 -16.40423 -15.71283 -15.46377 -15.17685 -14.97111 -14.52071 -14.05926 -13.73049 -13.52178 -13.29506 -12.41661 -12.33517 -11.89361 -11.65912 -11.39364 -11.34648 -11.21241 -10.95679 -10.74834 -10.55499 -10.27853 -10.16323 -9.73871 -9.55944 -9.30257 -8.99773 -8.69306 -8.48310 -7.28517 -6.08213 -3.42271 0.87448 1.05451 1.98194 2.15867 3.00124 3.27736 3.36021 3.38782 3.71345 3.90460 4.35233 4.91581 5.10205 5.21652 5.49607 5.60177 5.72061 5.77625 5.99781 6.12903 6.17379 6.26033 6.39379 6.56144 6.84010 7.52687 7.62896 7.77193 7.98327 8.82384 9.22306 9.51486 9.92440 11.02084 Molecular weight = 290.03amu Principal moments of inertia in cm(-1) A = 0.016736 B = 0.005644 C = 0.004515 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1672.668862 B = 4959.875430 C = 6199.561983 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.043 3.957 2 O -0.382 6.382 3 C 0.464 3.536 4 O -0.502 6.502 5 C 0.187 3.813 6 N -0.553 5.553 7 C -0.269 4.269 8 H 0.081 0.919 9 C 0.011 3.989 10 N -0.893 5.893 11 Si 0.906 3.094 12 H -0.286 1.286 13 H -0.287 1.287 14 H -0.276 1.276 15 C 0.210 3.790 16 C -0.185 4.185 17 C 0.024 3.976 18 N -0.460 5.460 19 C 0.040 3.960 20 Cl 0.004 6.996 21 S 0.195 5.805 22 H 0.046 0.954 23 H 0.081 0.919 24 H 0.054 0.946 25 H 0.055 0.945 26 H 0.113 0.887 27 H 0.260 0.740 28 H 0.071 0.929 29 H 0.072 0.928 30 H 0.177 0.823 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.421 0.303 -8.026 9.168 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.052 4.052 2 O -0.299 6.299 3 C 0.304 3.696 4 O -0.387 6.387 5 C 0.058 3.942 6 N -0.270 5.270 7 C -0.398 4.398 8 H 0.099 0.901 9 C -0.189 4.189 10 N -0.536 5.536 11 Si 0.734 3.266 12 H -0.212 1.212 13 H -0.213 1.213 14 H -0.201 1.201 15 C 0.080 3.920 16 C -0.311 4.311 17 C -0.127 4.127 18 N -0.178 5.178 19 C -0.262 4.262 20 Cl 0.031 6.969 21 S 0.444 5.556 22 H 0.065 0.935 23 H 0.100 0.900 24 H 0.072 0.928 25 H 0.073 0.927 26 H 0.131 0.869 27 H 0.070 0.930 28 H 0.089 0.911 29 H 0.090 0.910 30 H 0.194 0.806 Dipole moment (debyes) X Y Z Total from point charges 4.734 1.091 -7.675 9.084 hybrid contribution -0.254 -0.561 0.709 0.939 sum 4.481 0.530 -6.966 8.300 Atomic orbital electron populations 1.22880 0.79510 1.01480 1.01367 1.86532 1.21194 1.36509 1.85694 1.25365 0.93404 0.80299 0.70522 1.90478 1.66648 1.36411 1.45178 1.20249 0.85639 0.86437 1.01892 1.43906 1.74192 1.07097 1.01839 1.19192 1.29645 1.08394 0.82536 0.90109 1.24848 0.96142 0.99765 0.98098 1.69897 1.22644 1.34826 1.26253 0.86248 0.80045 0.77600 0.82678 1.21241 1.21323 1.20082 1.19306 0.86132 0.98091 0.88453 1.27943 1.03200 0.98561 1.01354 1.21384 0.90180 1.01003 1.00106 1.65879 1.06811 1.20363 1.24706 1.26885 0.94046 1.00503 1.04774 1.98384 1.10259 1.93979 1.94231 1.84194 1.01335 1.27961 1.42132 0.93499 0.90008 0.92754 0.92670 0.86933 0.93004 0.91103 0.91013 0.80572 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 32. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.71 10.56 101.05 1.07 1.78 16 2 O -0.38 -7.86 10.57 -39.25 -0.41 -8.28 16 3 C 0.46 10.65 6.17 36.00 0.22 10.88 16 4 O -0.50 -12.99 15.80 -18.75 -0.30 -13.29 16 5 C 0.19 4.07 5.49 -5.20 -0.03 4.04 16 6 N -0.55 -12.38 2.01 -175.98 -0.35 -12.73 16 7 C -0.27 -6.70 9.64 -15.06 -0.15 -6.85 16 8 H 0.08 1.96 7.93 -52.49 -0.42 1.55 16 9 C 0.01 0.29 4.81 -17.43 -0.08 0.20 16 10 N -0.89 -24.13 9.38 55.49 0.52 -23.61 16 11 Si 0.91 20.57 29.62 -169.99 -5.03 15.53 16 12 H -0.29 -6.59 7.11 56.52 0.40 -6.19 16 13 H -0.29 -6.61 7.11 56.52 0.40 -6.21 16 14 H -0.28 -6.14 7.11 56.52 0.40 -5.74 16 15 C 0.21 3.91 6.16 -5.19 -0.03 3.87 16 16 C -0.19 -3.10 6.18 -35.94 -0.22 -3.32 16 17 C 0.02 0.38 11.25 -19.17 -0.22 0.16 16 18 N -0.46 -7.77 10.55 -12.81 -0.14 -7.90 16 19 C 0.04 0.63 8.03 51.63 0.41 1.05 16 20 Cl 0.00 0.06 29.33 -51.86 -1.52 -1.47 16 21 S 0.19 3.01 23.22 -107.50 -2.50 0.51 16 22 H 0.05 0.74 8.13 -51.93 -0.42 0.32 16 23 H 0.08 1.06 8.14 -51.93 -0.42 0.64 16 24 H 0.05 0.98 8.13 -51.93 -0.42 0.56 16 25 H 0.06 1.02 8.12 -51.93 -0.42 0.60 16 26 H 0.11 2.68 6.46 -51.93 -0.34 2.34 16 27 H 0.26 6.92 8.31 -40.82 -0.34 6.58 16 28 H 0.07 1.24 8.07 -51.93 -0.42 0.82 16 29 H 0.07 1.34 8.04 -51.93 -0.42 0.92 16 30 H 0.18 2.46 8.06 -52.49 -0.42 2.03 16 LS Contribution 299.48 15.07 4.51 4.51 Total: -1.00 -29.59 299.48 -7.08 -36.67 By element: Atomic # 1 Polarization: 1.06 SS G_CDS: -2.84 Total: -1.77 kcal Atomic # 6 Polarization: 10.85 SS G_CDS: 0.98 Total: 11.82 kcal Atomic # 7 Polarization: -44.28 SS G_CDS: 0.03 Total: -44.24 kcal Atomic # 8 Polarization: -20.86 SS G_CDS: -0.71 Total: -21.57 kcal Atomic # 14 Polarization: 20.57 SS G_CDS: -5.03 Total: 15.53 kcal Atomic # 16 Polarization: 3.01 SS G_CDS: -2.50 Total: 0.51 kcal Atomic # 17 Polarization: 0.06 SS G_CDS: -1.52 Total: -1.47 kcal Total LS contribution 4.51 Total: 4.51 kcal Total: -29.59 -7.08 -36.67 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000175449381.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.377 kcal (2) G-P(sol) polarization free energy of solvation -29.592 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.215 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.078 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.670 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.292 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds