Wall clock time and date at job start Tue Mar 31 2020 05:49:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.52997 * 109.47288 * 2 1 4 4 H 1.09003 * 109.47477 * 54.99873 * 3 2 1 5 5 C 1.50696 * 109.47338 * 175.00133 * 3 2 1 6 6 H 1.08002 * 120.00292 * 119.99727 * 5 3 2 7 7 C 1.37876 * 119.99908 * 299.99935 * 5 3 2 8 8 N 1.31510 * 120.00087 * 359.97438 * 7 5 3 9 9 Si 1.86798 * 120.00086 * 179.97438 * 7 5 3 10 10 H 1.48508 * 109.47176 * 89.99972 * 9 7 5 11 11 H 1.48503 * 109.47463 * 209.99806 * 9 7 5 12 12 H 1.48504 * 109.47385 * 330.00178 * 9 7 5 13 13 N 1.46502 * 109.46938 * 295.00422 * 3 2 1 14 14 C 1.34773 * 120.00591 * 84.99916 * 13 3 2 15 15 O 1.21719 * 119.99731 * 359.97438 * 14 13 3 16 16 C 1.46545 * 120.00257 * 179.97438 * 14 13 3 17 17 C 1.37955 * 126.22117 * 179.97438 * 16 14 13 18 18 C 1.39796 * 107.12496 * 179.97438 * 17 16 14 19 19 Cl 1.73601 * 126.05940 * 179.97438 * 18 17 16 20 20 C 1.35721 * 107.87696 * 0.02562 * 18 17 16 21 21 Cl 1.73599 * 125.58240 * 179.97438 * 20 18 17 22 22 N 1.35667 * 108.82942 * 0.26039 * 20 18 17 23 23 H 0.96995 * 125.69078 * 179.73883 * 22 20 18 24 24 H 1.09004 * 109.47344 * 300.00239 * 1 2 3 25 25 H 1.08997 * 109.47306 * 59.99763 * 1 2 3 26 26 H 1.09001 * 109.47172 * 180.02562 * 1 2 3 27 27 H 1.09001 * 109.46925 * 240.00041 * 2 1 3 28 28 H 1.09004 * 109.46981 * 120.00088 * 2 1 3 29 29 H 0.97008 * 120.00417 * 179.97438 * 8 7 5 30 30 H 0.97004 * 119.99308 * 264.99634 * 13 3 2 31 31 H 1.08001 * 126.43486 * 359.93075 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 1.6054 1.9816 0.8418 5 6 3.5419 1.4443 0.1238 6 1 4.1472 1.8888 -0.6524 7 6 4.1432 0.8784 1.2279 8 7 3.4062 0.3375 2.1733 9 14 6.0049 0.8800 1.3811 10 1 6.4428 2.1129 2.0836 11 1 6.4391 -0.3111 2.1546 12 1 6.6131 0.8394 0.0269 13 7 1.6523 2.0974 -1.2518 14 6 0.4351 2.6644 -1.3670 15 8 -0.3424 2.6318 -0.4310 16 6 0.0476 3.3200 -2.6190 17 6 -1.1589 3.9374 -2.8764 18 6 -1.1008 4.4251 -4.1852 19 17 -2.3608 5.2875 -5.0113 20 6 0.1150 4.1040 -4.6959 21 17 0.6734 4.4897 -6.2937 22 7 0.8199 3.4266 -3.7553 23 1 1.7186 3.0781 -3.8636 24 1 -0.3634 0.5139 0.8900 25 1 -0.3634 0.5138 -0.8899 26 1 -0.3633 -1.0277 0.0005 27 1 1.8933 -0.5138 -0.8900 28 1 1.8933 -0.5139 0.8900 29 1 3.8293 -0.0610 2.9500 30 1 2.2719 2.1231 -1.9978 31 1 -1.9921 4.0265 -2.1950 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000183914479.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:49:55 Heat of formation + Delta-G solvation = -14.780784 kcal Electronic energy + Delta-G solvation = -18439.844321 eV Core-core repulsion = 15194.543111 eV Total energy + Delta-G solvation = -3245.301210 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 290.033 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -41.49066 -38.79363 -36.98212 -36.55346 -35.22635 -32.63906 -31.38571 -30.96078 -29.07538 -26.99595 -23.57975 -22.50509 -21.00581 -20.41804 -19.58879 -19.04453 -16.75533 -15.80296 -15.48084 -15.36458 -14.85142 -14.38911 -14.32031 -13.82401 -13.37631 -13.26441 -12.75455 -12.30583 -12.07014 -11.86006 -11.60317 -11.58100 -11.34987 -11.07605 -11.00156 -10.93037 -10.42865 -10.30189 -9.75026 -9.44555 -9.17870 -9.10469 -8.60917 -8.36334 -8.00308 -6.22193 -4.32744 1.26262 1.31432 2.00334 2.19092 3.12793 3.18115 3.25412 3.26227 3.70719 3.84205 4.27686 4.77424 5.06024 5.09896 5.46592 5.59473 6.13840 6.31191 6.35995 6.37962 6.56291 6.82981 6.94889 7.10034 7.17668 7.27676 7.49672 7.58951 7.77071 8.05832 8.41867 8.61640 8.85244 9.34553 10.83030 Molecular weight = 290.03amu Principal moments of inertia in cm(-1) A = 0.024370 B = 0.003973 C = 0.003569 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1148.658293 B = 7046.156079 C = 7843.454183 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.139 4.139 2 C -0.128 4.128 3 C 0.271 3.729 4 H 0.054 0.946 5 C -0.539 4.539 6 H 0.060 0.940 7 C 0.069 3.931 8 N -0.879 5.879 9 Si 0.902 3.098 10 H -0.279 1.279 11 H -0.284 1.284 12 H -0.274 1.274 13 N -0.702 5.702 14 C 0.572 3.428 15 O -0.523 6.523 16 C 0.004 3.996 17 C -0.102 4.102 18 C -0.096 4.096 19 Cl -0.036 7.036 20 C 0.087 3.913 21 Cl -0.004 7.004 22 N -0.521 5.521 23 H 0.428 0.572 24 H 0.051 0.949 25 H 0.038 0.962 26 H 0.025 0.975 27 H 0.031 0.969 28 H 0.101 0.899 29 H 0.266 0.734 30 H 0.382 0.618 31 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.447 6.133 -14.355 16.533 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.197 4.197 2 C -0.167 4.167 3 C 0.170 3.830 4 H 0.072 0.928 5 C -0.577 4.577 6 H 0.079 0.921 7 C -0.135 4.135 8 N -0.516 5.516 9 Si 0.729 3.271 10 H -0.205 1.205 11 H -0.210 1.210 12 H -0.199 1.199 13 N -0.349 5.349 14 C 0.356 3.644 15 O -0.400 6.400 16 C -0.111 4.111 17 C -0.128 4.128 18 C -0.131 4.131 19 Cl -0.007 7.007 20 C -0.057 4.057 21 Cl 0.024 6.976 22 N -0.122 5.122 23 H 0.268 0.732 24 H 0.070 0.930 25 H 0.057 0.943 26 H 0.044 0.956 27 H 0.050 0.950 28 H 0.120 0.880 29 H 0.076 0.924 30 H 0.214 0.786 31 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges -5.867 6.010 -13.640 16.018 hybrid contribution 1.768 -0.068 -0.694 1.900 sum -4.099 5.942 -14.333 16.049 Atomic orbital electron populations 1.21859 0.98189 0.98345 1.01290 1.21949 0.92740 0.99524 1.02469 1.18895 0.94464 0.89303 0.80362 0.92820 1.21172 0.90456 1.39580 1.06533 0.92147 1.24868 0.98700 0.94620 0.95299 1.69882 1.35253 1.37217 1.09270 0.86445 0.84650 0.77764 0.78220 1.20488 1.20977 1.19892 1.46488 1.13909 1.55674 1.18845 1.16841 0.83353 0.79282 0.84885 1.90864 1.51430 1.59768 1.37972 1.21089 0.92956 1.08837 0.88249 1.21114 0.97540 1.00042 0.94130 1.19575 0.90435 1.08191 0.94910 1.98333 1.49651 1.75017 1.77712 1.20488 0.92778 1.05933 0.86508 1.98409 1.89553 1.92408 1.17235 1.41973 1.16308 1.43530 1.10417 0.73196 0.92960 0.94317 0.95617 0.94984 0.88050 0.92396 0.78576 0.81638 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.97 8.51 37.16 0.32 -2.65 16 2 C -0.13 -2.95 5.45 -26.73 -0.15 -3.10 16 3 C 0.27 6.40 2.24 -69.09 -0.15 6.25 16 4 H 0.05 1.48 7.58 -51.93 -0.39 1.08 16 5 C -0.54 -13.46 8.73 -34.44 -0.30 -13.76 16 6 H 0.06 1.43 7.74 -52.49 -0.41 1.03 16 7 C 0.07 1.77 5.29 -17.82 -0.09 1.68 16 8 N -0.88 -23.66 11.29 55.43 0.63 -23.03 16 9 Si 0.90 19.81 29.54 -169.99 -5.02 14.79 16 10 H -0.28 -6.16 7.11 56.52 0.40 -5.76 16 11 H -0.28 -6.25 7.11 56.52 0.40 -5.85 16 12 H -0.27 -5.88 7.11 56.52 0.40 -5.48 16 13 N -0.70 -13.35 5.02 -56.28 -0.28 -13.63 16 14 C 0.57 10.67 6.35 -12.91 -0.08 10.59 16 15 O -0.52 -11.50 14.01 5.17 0.07 -11.42 16 16 C 0.00 0.05 7.06 -81.94 -0.58 -0.53 16 17 C -0.10 -1.45 10.64 -39.10 -0.42 -1.86 16 18 C -0.10 -1.23 6.66 -39.90 -0.27 -1.50 16 19 Cl -0.04 -0.41 29.12 -51.86 -1.51 -1.92 16 20 C 0.09 1.03 7.75 -16.76 -0.13 0.90 16 21 Cl 0.00 -0.04 29.13 -51.86 -1.51 -1.56 16 22 N -0.52 -6.22 6.01 -6.51 -0.04 -6.26 16 23 H 0.43 4.07 8.19 -40.82 -0.33 3.74 16 24 H 0.05 1.18 7.84 -51.93 -0.41 0.78 16 25 H 0.04 0.80 5.64 -51.93 -0.29 0.50 16 26 H 0.02 0.49 8.14 -51.93 -0.42 0.06 16 27 H 0.03 0.70 8.14 -51.93 -0.42 0.28 16 28 H 0.10 2.60 5.95 -51.93 -0.31 2.30 16 29 H 0.27 6.82 8.31 -40.82 -0.34 6.48 16 30 H 0.38 6.11 7.67 -40.82 -0.31 5.80 16 31 H 0.17 2.25 8.06 -52.49 -0.42 1.82 16 LS Contribution 297.37 15.07 4.48 4.48 Total: -1.00 -27.86 297.37 -7.89 -35.75 By element: Atomic # 1 Polarization: 9.64 SS G_CDS: -2.86 Total: 6.78 kcal Atomic # 6 Polarization: -2.13 SS G_CDS: -1.85 Total: -3.99 kcal Atomic # 7 Polarization: -43.23 SS G_CDS: 0.30 Total: -42.92 kcal Atomic # 8 Polarization: -11.50 SS G_CDS: 0.07 Total: -11.42 kcal Atomic # 14 Polarization: 19.81 SS G_CDS: -5.02 Total: 14.79 kcal Atomic # 17 Polarization: -0.45 SS G_CDS: -3.02 Total: -3.47 kcal Total LS contribution 4.48 Total: 4.48 kcal Total: -27.86 -7.89 -35.75 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000183914479.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 20.971 kcal (2) G-P(sol) polarization free energy of solvation -27.859 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.888 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.893 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.752 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.781 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds