Wall clock time and date at job start Tue Mar 31 2020 05:50:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 H 1.08998 * 109.47568 * 2 1 4 4 C 1.50700 * 109.47167 * 120.00427 * 2 1 3 5 5 H 1.07994 * 120.00311 * 119.99303 * 4 2 1 6 6 C 1.37876 * 119.99668 * 299.99836 * 4 2 1 7 7 N 1.31514 * 120.00148 * 179.97438 * 6 4 2 8 8 Si 1.86803 * 120.00161 * 0.02562 * 6 4 2 9 9 H 1.48498 * 109.47246 * 89.99922 * 8 6 4 10 10 H 1.48501 * 109.47119 * 210.00472 * 8 6 4 11 11 H 1.48499 * 109.46964 * 329.99967 * 8 6 4 12 12 N 1.46505 * 109.46911 * 240.00050 * 2 1 3 13 13 C 1.34770 * 120.00315 * 84.72760 * 12 2 1 14 14 O 1.21723 * 119.99678 * 354.35508 * 13 12 2 15 15 C 1.46535 * 120.00640 * 174.34978 * 13 12 2 16 16 C 1.37967 * 126.22002 * 4.25091 * 15 13 12 17 17 C 1.39786 * 107.12980 * 179.97438 * 16 15 13 18 18 Cl 1.73596 * 126.06249 * 179.97438 * 17 16 15 19 19 C 1.35729 * 107.87447 * 359.97438 * 17 16 15 20 20 Cl 1.73600 * 125.58100 * 180.02562 * 19 17 16 21 21 N 1.35657 * 108.82931 * 359.73353 * 19 17 16 22 22 C 1.46499 * 125.69680 * 180.30262 * 21 19 17 23 23 H 1.09002 * 109.47024 * 59.99755 * 1 2 3 24 24 H 1.09000 * 109.47244 * 179.97438 * 1 2 3 25 25 H 1.08995 * 109.46797 * 300.00208 * 1 2 3 26 26 H 0.96995 * 120.00233 * 179.97438 * 7 6 4 27 27 H 0.97004 * 120.00116 * 265.00216 * 12 2 1 28 28 H 1.08000 * 126.43289 * 0.02562 * 16 15 13 29 29 H 1.08994 * 109.47305 * 264.44747 * 22 21 19 30 30 H 1.09004 * 109.47072 * 24.44465 * 22 21 19 31 31 H 1.09002 * 109.47716 * 144.44385 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0276 0.0000 4 6 2.0324 -0.7105 1.2304 5 1 2.6532 -1.5886 1.1313 6 6 1.6993 -0.2395 2.4827 7 7 2.1372 -0.8597 3.5565 8 14 0.6248 1.2789 2.6541 9 1 -0.8028 0.8726 2.6998 10 1 0.9760 1.9950 3.9068 11 1 0.8470 2.1764 1.4921 12 7 2.0183 -0.6906 -1.1962 13 6 2.1418 -0.0197 -2.3585 14 8 1.7520 1.1304 -2.4417 15 6 2.7455 -0.6746 -3.5221 16 6 3.1535 -1.9905 -3.5965 17 6 3.6675 -2.1902 -4.8810 18 17 4.3191 -3.6747 -5.5016 19 6 3.5667 -1.0175 -5.5570 20 17 4.0704 -0.7503 -7.1967 21 7 3.0021 -0.0903 -4.7435 22 6 2.7161 1.3010 -5.1023 23 1 -0.3633 0.5139 -0.8900 24 1 -0.3634 -1.0277 -0.0005 25 1 -0.3633 0.5138 0.8899 26 1 1.9032 -0.5281 4.4375 27 1 2.2490 -1.6318 -1.1527 28 1 3.0874 -2.7279 -2.8102 29 1 3.5362 1.9377 -4.7705 30 1 2.6076 1.3823 -6.1839 31 1 1.7917 1.6181 -4.6196 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000194712132.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:50:39 Heat of formation + Delta-G solvation = 2.203532 kcal Electronic energy + Delta-G solvation = -18459.807539 eV Core-core repulsion = 15215.242824 eV Total energy + Delta-G solvation = -3244.564715 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 290.033 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -41.60833 -38.78276 -36.97314 -36.56856 -35.17514 -33.19835 -32.34204 -30.53236 -28.57996 -26.70544 -25.25291 -23.21201 -21.28625 -20.31638 -19.59545 -18.27493 -16.79987 -16.05107 -15.88984 -15.59296 -14.82070 -14.43320 -14.15449 -13.88065 -13.61528 -13.25224 -13.16312 -12.98645 -12.41083 -12.24642 -12.05772 -11.88844 -11.59517 -11.52377 -11.31649 -11.01846 -10.86617 -10.24589 -9.83994 -9.45058 -9.31235 -8.89762 -8.82756 -8.47066 -8.16533 -6.25296 -4.28855 1.24497 1.31075 1.96645 2.15346 2.81472 3.19899 3.32175 3.34934 3.56149 3.80795 4.26948 4.58134 4.83134 5.01977 5.09088 5.11808 5.33913 5.51778 5.66336 6.10451 6.24521 6.30996 6.46968 6.48164 6.61677 6.77070 7.08905 7.15177 7.41024 8.02435 8.39875 8.62388 8.76148 9.34138 10.86684 Molecular weight = 290.03amu Principal moments of inertia in cm(-1) A = 0.027862 B = 0.004076 C = 0.003660 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1004.698512 B = 6867.252932 C = 7649.435269 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.162 4.162 2 C 0.241 3.759 3 H 0.050 0.950 4 C -0.538 4.538 5 H 0.083 0.917 6 C 0.080 3.920 7 N -0.890 5.890 8 Si 0.885 3.115 9 H -0.275 1.275 10 H -0.294 1.294 11 H -0.262 1.262 12 N -0.681 5.681 13 C 0.577 3.423 14 O -0.556 6.556 15 C 0.000 4.000 16 C -0.126 4.126 17 C -0.095 4.095 18 Cl -0.036 7.036 19 C 0.082 3.918 20 Cl -0.005 7.005 21 N -0.396 5.396 22 C 0.064 3.936 23 H 0.038 0.962 24 H 0.055 0.945 25 H 0.048 0.952 26 H 0.268 0.732 27 H 0.400 0.600 28 H 0.166 0.834 29 H 0.084 0.916 30 H 0.085 0.915 31 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.236 -0.928 -19.232 19.384 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.221 4.221 2 C 0.138 3.862 3 H 0.068 0.932 4 C -0.576 4.576 5 H 0.101 0.899 6 C -0.124 4.124 7 N -0.526 5.526 8 Si 0.715 3.285 9 H -0.202 1.202 10 H -0.221 1.221 11 H -0.187 1.187 12 N -0.328 5.328 13 C 0.362 3.638 14 O -0.437 6.437 15 C -0.116 4.116 16 C -0.152 4.152 17 C -0.129 4.129 18 Cl -0.007 7.007 19 C -0.062 4.062 20 Cl 0.023 6.977 21 N -0.072 5.072 22 C -0.076 4.076 23 H 0.057 0.943 24 H 0.074 0.926 25 H 0.067 0.933 26 H 0.078 0.922 27 H 0.234 0.766 28 H 0.183 0.817 29 H 0.103 0.897 30 H 0.104 0.896 31 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges 1.991 0.175 -19.309 19.412 hybrid contribution -0.302 0.191 -0.052 0.361 sum 1.689 0.366 -19.361 19.438 Atomic orbital electron populations 1.22461 0.98991 1.01108 0.99497 1.19188 0.90389 0.94517 0.82130 0.93239 1.21005 1.33558 1.14645 0.88354 0.89946 1.24810 0.95426 0.96671 0.95474 1.69858 1.44684 1.39986 0.98083 0.86886 0.80608 0.83563 0.77483 1.20224 1.22104 1.18712 1.45946 1.64095 1.14035 1.08756 1.16799 0.79216 0.85765 0.82006 1.90766 1.51386 1.17644 1.83919 1.20441 1.10501 0.92991 0.87626 1.21248 1.02818 0.94934 0.96216 1.19525 1.10804 0.87595 0.95010 1.98333 1.84734 1.30754 1.86890 1.20509 1.08621 0.89927 0.87097 1.98388 1.89062 1.96636 1.13592 1.43748 1.43925 1.10334 1.09163 1.22410 1.05322 0.77600 1.02269 0.94330 0.92619 0.93313 0.92186 0.76577 0.81702 0.89697 0.89645 0.86976 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -3.48 8.96 37.16 0.33 -3.15 16 2 C 0.24 5.49 2.11 -69.08 -0.15 5.34 16 3 H 0.05 1.23 6.73 -51.93 -0.35 0.88 16 4 C -0.54 -14.01 9.31 -34.44 -0.32 -14.33 16 5 H 0.08 2.26 7.98 -52.49 -0.42 1.84 16 6 C 0.08 2.19 5.45 -17.82 -0.10 2.09 16 7 N -0.89 -25.73 13.96 55.43 0.77 -24.95 16 8 Si 0.88 21.08 24.37 -169.99 -4.14 16.93 16 9 H -0.28 -6.36 6.87 56.52 0.39 -5.97 16 10 H -0.29 -7.00 7.11 56.52 0.40 -6.60 16 11 H -0.26 -6.16 6.53 56.52 0.37 -5.80 16 12 N -0.68 -12.96 5.05 -56.28 -0.28 -13.24 16 13 C 0.58 10.53 7.73 -12.92 -0.10 10.43 16 14 O -0.56 -11.43 14.41 5.17 0.07 -11.36 16 15 C 0.00 -0.01 6.89 -81.94 -0.56 -0.57 16 16 C -0.13 -1.71 10.34 -39.10 -0.40 -2.11 16 17 C -0.09 -1.24 6.66 -39.90 -0.27 -1.50 16 18 Cl -0.04 -0.42 29.12 -51.86 -1.51 -1.93 16 19 C 0.08 1.04 7.39 -16.76 -0.12 0.92 16 20 Cl -0.01 -0.05 28.38 -51.86 -1.47 -1.53 16 21 N -0.40 -5.37 3.17 -116.64 -0.37 -5.74 16 22 C 0.06 0.72 10.34 59.85 0.62 1.34 16 23 H 0.04 0.78 8.04 -51.93 -0.42 0.36 16 24 H 0.05 1.12 8.14 -51.93 -0.42 0.70 16 25 H 0.05 1.08 3.27 -51.93 -0.17 0.91 16 26 H 0.27 7.29 8.31 -40.82 -0.34 6.95 16 27 H 0.40 6.69 7.43 -40.82 -0.30 6.38 16 28 H 0.17 1.92 7.44 -52.49 -0.39 1.53 16 29 H 0.08 0.89 8.14 -51.93 -0.42 0.47 16 30 H 0.08 0.73 7.58 -51.93 -0.39 0.34 16 31 H 0.11 1.40 6.57 -51.93 -0.34 1.06 16 LS Contribution 293.78 15.07 4.43 4.43 Total: -1.00 -29.49 293.78 -6.38 -35.87 By element: Atomic # 1 Polarization: 5.87 SS G_CDS: -2.81 Total: 3.06 kcal Atomic # 6 Polarization: -0.48 SS G_CDS: -1.07 Total: -1.55 kcal Atomic # 7 Polarization: -44.05 SS G_CDS: 0.12 Total: -43.93 kcal Atomic # 8 Polarization: -11.43 SS G_CDS: 0.07 Total: -11.36 kcal Atomic # 14 Polarization: 21.08 SS G_CDS: -4.14 Total: 16.93 kcal Atomic # 17 Polarization: -0.47 SS G_CDS: -2.98 Total: -3.45 kcal Total LS contribution 4.43 Total: 4.43 kcal Total: -29.49 -6.38 -35.87 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000194712132.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.077 kcal (2) G-P(sol) polarization free energy of solvation -29.489 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.587 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.384 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.873 kcal (6) G-S(sol) free energy of system = (1) + (5) 2.204 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds