Wall clock time and date at job start Tue Mar 31 2020 06:21:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.36653 * 120.00085 * 2 1 4 4 H 1.08004 * 120.00193 * 187.84272 * 3 2 1 5 5 C 1.39190 * 119.99871 * 7.83596 * 3 2 1 6 6 N 1.31270 * 120.00261 * 7.94587 * 5 3 2 7 7 Si 1.86806 * 120.00082 * 187.94156 * 5 3 2 8 8 H 1.48498 * 109.46791 * 60.00094 * 7 5 3 9 9 H 1.48496 * 109.47237 * 180.02562 * 7 5 3 10 10 H 1.48500 * 109.47041 * 300.00293 * 7 5 3 11 11 C 1.34774 * 119.99898 * 180.02562 * 2 1 3 12 12 O 1.21611 * 120.00176 * 183.78607 * 11 2 1 13 13 C 1.47692 * 120.00023 * 3.77900 * 11 2 1 14 14 C 1.38988 * 121.11396 * 306.00981 * 13 11 2 15 15 C 1.39352 * 119.55610 * 180.02562 * 14 13 11 16 16 Cl 1.73593 * 119.06860 * 180.02562 * 15 14 13 17 17 N 1.31146 * 121.85962 * 0.05053 * 15 14 13 18 18 C 1.33600 * 121.83977 * 359.90521 * 17 15 14 19 19 C 1.40686 * 120.95396 * 180.02562 * 18 17 15 20 20 C 1.36096 * 119.74533 * 180.02562 * 19 18 17 21 21 C 1.39317 * 121.03736 * 359.97438 * 20 19 18 22 22 C 1.36291 * 120.82682 * 0.02562 * 21 20 19 23 23 C 1.40043 * 119.64749 * 0.02562 * 22 21 20 24 24 H 1.08998 * 109.47545 * 174.12746 * 1 2 3 25 25 H 1.09000 * 109.47388 * 294.13038 * 1 2 3 26 26 H 1.09004 * 109.47243 * 54.12863 * 1 2 3 27 27 H 0.97000 * 120.00164 * 179.97438 * 6 5 3 28 28 H 1.08006 * 120.22088 * 359.97438 * 14 13 11 29 29 H 1.07999 * 120.12361 * 0.02562 * 19 18 17 30 30 H 1.08004 * 119.47881 * 179.97438 * 20 19 18 31 31 H 1.08007 * 119.58222 * 179.74579 * 21 20 19 32 32 H 1.08003 * 120.16884 * 179.97438 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1483 1.1834 0.0000 4 1 3.2207 1.1878 -0.1276 5 6 1.4621 2.3832 0.1643 6 7 0.1865 2.3727 0.4743 7 14 2.3563 4.0085 -0.0560 8 1 2.8990 4.0917 -1.4358 9 1 1.4095 5.1294 0.1724 10 1 3.4715 4.0963 0.9207 11 6 2.1388 -1.1672 -0.0005 12 8 3.3530 -1.1684 0.0690 13 6 1.4028 -2.4448 -0.0854 14 6 0.3847 -2.7480 0.8109 15 6 -0.2882 -3.9634 0.7013 16 17 -1.5581 -4.3289 1.8270 17 7 0.0112 -4.8391 -0.2279 18 6 0.9771 -4.6144 -1.1232 19 6 1.2824 -5.5668 -2.1126 20 6 2.2717 -5.3126 -3.0121 21 6 2.9909 -4.1202 -2.9710 22 6 2.7225 -3.1749 -2.0266 23 6 1.7117 -3.4040 -1.0847 24 1 -0.3634 -1.0222 -0.1051 25 1 -0.3634 0.4201 0.9378 26 1 -0.3634 0.6022 -0.8328 27 1 -0.2916 3.2089 0.5892 28 1 0.1174 -2.0467 1.5876 29 1 0.7339 -6.4960 -2.1582 30 1 2.5028 -6.0469 -3.7696 31 1 3.7739 -3.9446 -3.6938 32 1 3.2869 -2.2543 -2.0043 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000227422367.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:21:21 Heat of formation + Delta-G solvation = 33.626587 kcal Electronic energy + Delta-G solvation = -20258.351410 eV Core-core repulsion = 17017.582151 eV Total energy + Delta-G solvation = -3240.769259 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 290.056 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -40.81250 -38.46082 -37.29991 -36.08903 -34.99762 -33.25526 -31.77308 -30.27213 -29.86720 -26.63090 -25.47123 -23.88988 -23.44215 -22.32955 -19.60972 -18.11607 -17.46873 -17.18657 -16.61437 -15.72044 -14.88748 -14.69255 -14.62036 -14.20433 -14.08779 -13.99106 -13.70046 -13.07960 -12.68652 -12.46786 -11.91925 -11.83171 -11.47929 -11.27840 -11.15391 -11.13935 -11.08734 -10.88324 -10.58463 -10.53576 -10.01301 -9.71528 -9.29210 -8.64134 -8.54219 -8.12568 -8.02779 -6.52219 -4.03794 0.37116 0.86042 1.85864 2.01791 2.89473 3.05965 3.11573 3.14734 3.63787 3.88482 4.20948 4.38329 4.54266 4.82310 4.94615 4.99013 5.07211 5.14520 5.34255 5.41761 5.60578 5.81431 5.92122 6.10771 6.17300 6.22539 6.42818 6.59706 6.63619 6.83860 6.92826 7.17989 7.31856 7.77432 7.79690 8.20784 8.90288 9.12136 9.68278 10.40201 Molecular weight = 290.06amu Principal moments of inertia in cm(-1) A = 0.016527 B = 0.005704 C = 0.004460 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1693.768923 B = 4907.939900 C = 6276.278505 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.094 3.906 2 N -0.413 5.413 3 C -0.300 4.300 4 H 0.111 0.889 5 C 0.031 3.969 6 N -0.869 5.869 7 Si 0.938 3.062 8 H -0.270 1.270 9 H -0.281 1.281 10 H -0.269 1.269 11 C 0.453 3.547 12 O -0.585 6.585 13 C 0.001 3.999 14 C -0.153 4.153 15 C 0.213 3.787 16 Cl -0.035 7.035 17 N -0.480 5.480 18 C 0.146 3.854 19 C -0.104 4.104 20 C -0.094 4.094 21 C -0.129 4.129 22 C -0.068 4.068 23 C -0.081 4.081 24 H 0.034 0.966 25 H 0.089 0.911 26 H 0.062 0.938 27 H 0.273 0.727 28 H 0.152 0.848 29 H 0.135 0.865 30 H 0.129 0.871 31 H 0.128 0.872 32 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.281 -9.788 -3.639 10.689 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.049 4.049 2 N -0.127 5.127 3 C -0.428 4.428 4 H 0.128 0.872 5 C -0.173 4.173 6 N -0.507 5.507 7 Si 0.763 3.237 8 H -0.195 1.195 9 H -0.206 1.206 10 H -0.194 1.194 11 C 0.242 3.758 12 O -0.472 6.472 13 C -0.011 4.011 14 C -0.175 4.175 15 C 0.035 3.965 16 Cl -0.007 7.007 17 N -0.192 5.192 18 C 0.024 3.976 19 C -0.123 4.123 20 C -0.114 4.114 21 C -0.147 4.147 22 C -0.087 4.087 23 C -0.084 4.084 24 H 0.052 0.948 25 H 0.107 0.893 26 H 0.081 0.919 27 H 0.084 0.916 28 H 0.169 0.831 29 H 0.153 0.847 30 H 0.147 0.853 31 H 0.146 0.854 32 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges -2.406 -10.418 -3.583 11.276 hybrid contribution 0.335 1.526 0.186 1.574 sum -2.071 -8.892 -3.397 9.741 Atomic orbital electron populations 1.22157 0.79948 0.97671 1.05098 1.43646 1.06434 1.04691 1.57978 1.19871 0.94333 0.81777 1.46840 0.87173 1.25481 0.95911 1.00283 0.95674 1.70036 1.08575 1.28367 1.43742 0.85804 0.78917 0.79554 0.79405 1.19545 1.20598 1.19431 1.17355 0.87324 0.82292 0.88830 1.90655 1.12614 1.85969 1.57953 1.20788 0.92359 0.95602 0.92362 1.22036 0.96854 0.96645 1.01959 1.21605 0.91898 0.90852 0.92150 1.98391 1.49308 1.95121 1.57860 1.67025 1.16458 1.31978 1.03717 1.18544 0.91962 0.92860 0.94218 1.20686 0.98673 0.98782 0.94138 1.20893 0.95100 0.97145 0.98239 1.20967 1.00483 0.93988 0.99303 1.21276 0.94872 1.00202 0.92316 1.18766 0.98297 0.94454 0.96874 0.94810 0.89313 0.91913 0.91591 0.83055 0.84737 0.85344 0.85429 0.83866 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 2.07 8.01 59.85 0.48 2.55 16 2 N -0.41 -10.21 3.01 -123.35 -0.37 -10.58 16 3 C -0.30 -7.88 9.52 -15.05 -0.14 -8.03 16 4 H 0.11 3.00 7.21 -52.48 -0.38 2.62 16 5 C 0.03 0.77 5.38 -17.44 -0.09 0.68 16 6 N -0.87 -21.34 9.66 55.51 0.54 -20.81 16 7 Si 0.94 19.41 29.56 -169.99 -5.03 14.38 16 8 H -0.27 -5.56 7.11 56.52 0.40 -5.16 16 9 H -0.28 -5.67 7.11 56.52 0.40 -5.27 16 10 H -0.27 -5.60 7.11 56.52 0.40 -5.20 16 11 C 0.45 10.91 6.48 -12.40 -0.08 10.83 16 12 O -0.58 -15.68 15.41 5.27 0.08 -15.60 16 13 C 0.00 0.02 4.91 -104.35 -0.51 -0.49 16 14 C -0.15 -2.79 7.26 -38.89 -0.28 -3.07 16 15 C 0.21 3.63 7.26 -17.43 -0.13 3.50 16 16 Cl -0.04 -0.51 29.08 -51.86 -1.51 -2.02 16 17 N -0.48 -8.38 10.26 -8.15 -0.08 -8.47 16 18 C 0.15 2.51 6.61 -84.87 -0.56 1.95 16 19 C -0.10 -1.44 9.98 -39.43 -0.39 -1.83 16 20 C -0.09 -1.13 9.94 -39.95 -0.40 -1.53 16 21 C -0.13 -1.75 9.96 -39.88 -0.40 -2.15 16 22 C -0.07 -1.19 9.25 -39.61 -0.37 -1.55 16 23 C -0.08 -1.53 5.76 -106.51 -0.61 -2.14 16 24 H 0.03 0.66 4.60 -51.93 -0.24 0.42 16 25 H 0.09 2.02 6.73 -51.93 -0.35 1.67 16 26 H 0.06 1.43 7.44 -51.93 -0.39 1.05 16 27 H 0.27 6.34 8.31 -40.82 -0.34 6.01 16 28 H 0.15 2.63 7.39 -52.48 -0.39 2.25 16 29 H 0.13 1.57 8.06 -52.49 -0.42 1.15 16 30 H 0.13 1.09 8.06 -52.48 -0.42 0.67 16 31 H 0.13 1.37 8.06 -52.48 -0.42 0.95 16 32 H 0.14 2.75 6.50 -52.48 -0.34 2.40 16 LS Contribution 290.99 15.07 4.39 4.39 Total: -1.00 -28.47 290.99 -7.96 -36.43 By element: Atomic # 1 Polarization: 6.04 SS G_CDS: -2.49 Total: 3.55 kcal Atomic # 6 Polarization: 2.20 SS G_CDS: -3.49 Total: -1.28 kcal Atomic # 7 Polarization: -39.93 SS G_CDS: 0.08 Total: -39.85 kcal Atomic # 8 Polarization: -15.68 SS G_CDS: 0.08 Total: -15.60 kcal Atomic # 14 Polarization: 19.41 SS G_CDS: -5.03 Total: 14.38 kcal Atomic # 17 Polarization: -0.51 SS G_CDS: -1.51 Total: -2.02 kcal Total LS contribution 4.39 Total: 4.39 kcal Total: -28.47 -7.96 -36.43 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000227422367.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 70.054 kcal (2) G-P(sol) polarization free energy of solvation -28.468 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 41.586 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.960 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.428 kcal (6) G-S(sol) free energy of system = (1) + (5) 33.627 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds