Wall clock time and date at job start Tue Mar 31 2020 05:48:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.47196 * 179.97438 * 2 1 4 4 C 1.53002 * 109.46998 * 88.13527 * 3 2 1 5 5 N 1.46504 * 109.46995 * 179.97438 * 4 3 2 6 6 C 1.46496 * 120.00100 * 269.99380 * 5 4 3 7 7 C 1.50696 * 109.47418 * 270.00371 * 6 5 4 8 8 H 1.08006 * 120.00005 * 359.97438 * 7 6 5 9 9 C 1.37869 * 120.00362 * 179.97438 * 7 6 5 10 10 N 1.31518 * 119.99735 * 359.97438 * 9 7 6 11 11 Si 1.86803 * 120.00462 * 179.97438 * 9 7 6 12 12 H 1.48496 * 109.46798 * 359.97438 * 11 9 7 13 13 H 1.48496 * 109.47028 * 119.99739 * 11 9 7 14 14 H 1.48500 * 109.47091 * 240.00232 * 11 9 7 15 15 C 1.34779 * 119.99839 * 89.99782 * 5 4 3 16 16 O 1.21282 * 119.99904 * 180.02562 * 15 5 4 17 17 C 1.50706 * 120.00112 * 359.97438 * 15 5 4 18 18 H 1.09000 * 115.55924 * 325.68624 * 17 15 5 19 19 C 1.53002 * 117.49668 * 180.02562 * 17 15 5 20 20 C 1.53000 * 60.02940 * 252.51929 * 19 17 15 21 21 Cl 1.80305 * 117.49532 * 107.48015 * 20 19 17 22 22 Cl 1.80300 * 117.50139 * 252.49834 * 20 19 17 23 23 H 1.09000 * 109.47280 * 328.13348 * 3 2 1 24 24 H 1.09009 * 109.47226 * 208.12955 * 3 2 1 25 25 H 1.08999 * 109.47711 * 59.99538 * 4 3 2 26 26 H 1.09007 * 109.46738 * 299.99231 * 4 3 2 27 27 H 1.09007 * 109.46962 * 30.00370 * 6 5 4 28 28 H 1.09003 * 109.46857 * 149.99772 * 6 5 4 29 29 H 0.97008 * 119.99811 * 179.97438 * 10 9 7 30 30 H 1.09002 * 117.49918 * 145.01964 * 19 17 15 31 31 H 1.09002 * 117.49754 * 0.02562 * 19 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1180 -0.0461 -1.4418 5 7 4.5830 -0.0448 -1.4418 6 6 5.3144 1.2239 -1.4834 7 6 5.5652 1.6124 -2.9177 8 1 5.2151 0.9775 -3.7183 9 6 6.2414 2.7782 -3.2080 10 7 6.6673 3.5515 -2.2332 11 14 6.5529 3.2595 -4.9859 12 1 5.9778 2.2278 -5.8859 13 1 5.9137 4.5708 -5.2630 14 1 8.0155 3.3619 -5.2220 15 6 5.2579 -1.2108 -1.4036 16 8 6.4707 -1.2098 -1.4031 17 6 4.5055 -2.5159 -1.3603 18 1 3.5672 -2.4996 -0.8058 19 6 5.3287 -3.8048 -1.3175 20 6 4.5819 -3.4170 -2.5953 21 17 5.5653 -2.8356 -3.9903 22 17 3.1126 -4.3705 -3.0228 23 1 2.9717 -0.8719 0.5425 24 1 2.9709 0.9072 0.4845 25 1 2.7542 0.8265 -1.9844 26 1 2.7551 -0.9526 -1.9263 27 1 4.7246 1.9995 -0.9947 28 1 6.2669 1.1112 -0.9655 29 1 7.1434 4.3717 -2.4374 30 1 4.9318 -4.6365 -0.7353 31 1 6.4145 -3.7088 -1.3202 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000299356040.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:48:13 Heat of formation + Delta-G solvation = 6.544791 kcal Electronic energy + Delta-G solvation = -18647.303419 eV Core-core repulsion = 15402.926956 eV Total energy + Delta-G solvation = -3244.376464 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 290.033 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -39.81983 -37.35666 -36.82311 -36.02154 -35.43847 -34.93793 -32.87087 -30.91472 -27.76895 -24.76818 -24.00485 -22.35841 -21.92273 -18.73949 -17.70982 -17.32095 -16.50249 -16.01038 -15.58812 -14.79702 -14.64515 -14.31783 -13.96172 -13.55602 -13.13951 -12.87993 -12.52692 -12.48410 -12.38812 -11.99852 -11.90651 -11.77820 -11.32704 -11.20778 -11.01791 -10.92060 -10.86725 -10.70429 -10.53414 -10.21874 -9.94126 -9.72092 -9.22528 -8.49723 -7.93991 -6.11494 -4.15455 1.08289 2.11531 2.55832 2.75181 2.78590 3.27050 3.35145 3.36887 3.45190 3.58424 4.05889 4.16198 4.33514 4.40951 4.80977 4.97802 5.03529 5.12171 5.24404 5.36728 5.39570 5.71335 5.76973 6.03766 6.83517 7.26791 7.35615 7.54697 7.85171 8.11607 8.14191 8.70980 8.91413 9.50303 10.96814 Molecular weight = 290.03amu Principal moments of inertia in cm(-1) A = 0.012208 B = 0.006732 C = 0.005093 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2292.937447 B = 4158.078465 C = 5496.604501 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.443 5.443 2 C 0.216 3.784 3 C -0.051 4.051 4 C 0.115 3.885 5 N -0.586 5.586 6 C 0.245 3.755 7 C -0.526 4.526 8 H 0.061 0.939 9 C 0.064 3.936 10 N -0.894 5.894 11 Si 0.894 3.106 12 H -0.273 1.273 13 H -0.283 1.283 14 H -0.283 1.283 15 C 0.537 3.463 16 O -0.513 6.513 17 C -0.161 4.161 18 H 0.140 0.860 19 C -0.114 4.114 20 C 0.016 3.984 21 Cl -0.065 7.065 22 Cl -0.099 7.099 23 H 0.106 0.894 24 H 0.119 0.881 25 H 0.097 0.903 26 H 0.076 0.924 27 H 0.037 0.963 28 H 0.048 0.952 29 H 0.263 0.737 30 H 0.125 0.875 31 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.451 -13.452 3.468 14.923 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.120 5.120 2 C -0.102 4.102 3 C -0.092 4.092 4 C -0.012 4.012 5 N -0.316 5.316 6 C 0.127 3.873 7 C -0.565 4.565 8 H 0.079 0.921 9 C -0.139 4.139 10 N -0.533 5.533 11 Si 0.722 3.278 12 H -0.197 1.197 13 H -0.210 1.210 14 H -0.209 1.209 15 C 0.321 3.679 16 O -0.389 6.389 17 C -0.184 4.184 18 H 0.158 0.842 19 C -0.152 4.152 20 C -0.037 4.037 21 Cl -0.038 7.038 22 Cl -0.072 7.072 23 H 0.124 0.876 24 H 0.137 0.863 25 H 0.116 0.884 26 H 0.094 0.906 27 H 0.055 0.945 28 H 0.066 0.934 29 H 0.073 0.927 30 H 0.143 0.857 31 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -6.416 -13.263 3.344 15.108 hybrid contribution 0.376 0.387 -1.160 1.280 sum -6.040 -12.875 2.184 14.388 Atomic orbital electron populations 1.81213 1.13013 1.09234 1.08522 1.29062 0.95072 0.92912 0.93193 1.19909 0.81477 1.06478 1.01374 1.21356 0.82062 1.04512 0.93228 1.48094 1.04957 1.07879 1.70720 1.19414 0.92601 0.77389 0.97880 1.21441 1.36626 1.06278 0.92142 0.92120 1.24889 0.95305 0.96252 0.97418 1.69926 1.38418 1.13605 1.31339 0.86500 0.78128 0.78308 0.84898 1.19717 1.20953 1.20882 1.18985 0.87378 0.83512 0.78020 1.90720 1.13081 1.86346 1.48715 1.23481 1.03397 0.93273 0.98222 0.84236 1.23909 1.01919 0.96487 0.92924 1.26487 0.90126 1.01485 0.85560 1.98807 1.69859 1.88487 1.46666 1.98745 1.40218 1.73693 1.94500 0.87599 0.86297 0.88417 0.90609 0.94491 0.93395 0.92721 0.85724 0.84811 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.44 -6.39 18.54 42.15 0.78 -5.61 16 2 C 0.22 2.53 15.43 -20.76 -0.32 2.21 16 3 C -0.05 -0.50 5.91 -29.52 -0.17 -0.68 16 4 C 0.11 1.50 5.00 -4.04 -0.02 1.48 16 5 N -0.59 -10.26 2.46 -175.05 -0.43 -10.69 16 6 C 0.25 5.59 5.16 -5.20 -0.03 5.57 16 7 C -0.53 -13.75 9.39 -34.44 -0.32 -14.07 16 8 H 0.06 1.61 7.81 -52.48 -0.41 1.20 16 9 C 0.06 1.72 5.46 -17.82 -0.10 1.62 16 10 N -0.89 -25.11 13.29 55.43 0.74 -24.38 16 11 Si 0.89 21.20 29.54 -169.99 -5.02 16.17 16 12 H -0.27 -6.44 7.11 56.52 0.40 -6.04 16 13 H -0.28 -6.60 7.11 56.52 0.40 -6.19 16 14 H -0.28 -6.75 7.11 56.52 0.40 -6.35 16 15 C 0.54 9.26 6.54 -10.98 -0.07 9.19 16 16 O -0.51 -10.99 15.67 5.56 0.09 -10.91 16 17 C -0.16 -1.98 4.64 -91.73 -0.43 -2.41 16 18 H 0.14 1.28 6.48 -51.93 -0.34 0.95 16 19 C -0.11 -1.21 9.72 -26.73 -0.26 -1.47 16 20 C 0.02 0.20 3.62 -26.70 -0.10 0.10 16 21 Cl -0.07 -1.04 28.18 -51.86 -1.46 -2.51 16 22 Cl -0.10 -1.11 29.29 -51.86 -1.52 -2.63 16 23 H 0.11 0.80 7.45 -51.93 -0.39 0.41 16 24 H 0.12 1.14 8.14 -51.92 -0.42 0.72 16 25 H 0.10 1.37 8.07 -51.93 -0.42 0.95 16 26 H 0.08 0.88 6.64 -51.93 -0.35 0.53 16 27 H 0.04 0.83 8.07 -51.93 -0.42 0.42 16 28 H 0.05 1.25 7.42 -51.93 -0.39 0.86 16 29 H 0.26 7.04 8.31 -40.82 -0.34 6.70 16 30 H 0.12 0.91 8.14 -51.93 -0.42 0.49 16 31 H 0.13 1.58 7.67 -51.93 -0.40 1.18 16 LS Contribution 313.37 15.07 4.72 4.72 Total: -1.00 -31.45 313.37 -7.00 -38.46 By element: Atomic # 1 Polarization: -1.09 SS G_CDS: -3.08 Total: -4.17 kcal Atomic # 6 Polarization: 3.35 SS G_CDS: -1.82 Total: 1.54 kcal Atomic # 7 Polarization: -41.77 SS G_CDS: 1.09 Total: -40.68 kcal Atomic # 8 Polarization: -10.99 SS G_CDS: 0.09 Total: -10.91 kcal Atomic # 14 Polarization: 21.20 SS G_CDS: -5.02 Total: 16.17 kcal Atomic # 17 Polarization: -2.16 SS G_CDS: -2.98 Total: -5.14 kcal Total LS contribution 4.72 Total: 4.72 kcal Total: -31.45 -7.00 -38.46 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000299356040.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 45.001 kcal (2) G-P(sol) polarization free energy of solvation -31.455 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.546 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.001 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.456 kcal (6) G-S(sol) free energy of system = (1) + (5) 6.545 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds