Wall clock time and date at job start Tue Mar 31 2020 06:15:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17395 * 1 3 3 C 1.47199 * 179.97438 * 2 1 4 4 N 1.46500 * 109.47320 * 41.33560 * 3 2 1 5 5 C 1.36639 * 119.99939 * 262.86621 * 4 3 2 6 6 H 1.08002 * 119.99437 * 201.96507 * 5 4 3 7 7 C 1.39186 * 120.00030 * 21.96747 * 5 4 3 8 8 N 1.31278 * 120.00203 * 10.99226 * 7 5 4 9 9 Si 1.86796 * 119.99951 * 190.98981 * 7 5 4 10 10 H 1.48505 * 109.47003 * 89.99880 * 9 7 5 11 11 H 1.48492 * 109.47350 * 210.00185 * 9 7 5 12 12 H 1.48506 * 109.47232 * 330.00275 * 9 7 5 13 13 C 1.34775 * 119.99802 * 82.86959 * 4 3 2 14 14 O 1.21736 * 119.99969 * 180.02562 * 13 4 3 15 15 C 1.46422 * 120.00170 * 359.97438 * 13 4 3 16 16 C 1.34836 * 119.99936 * 173.32569 * 15 13 4 17 17 C 1.47314 * 120.00316 * 348.72140 * 16 15 13 18 18 C 1.40248 * 120.94028 * 315.32493 * 17 16 15 19 19 C 1.37917 * 118.99051 * 180.02562 * 18 17 16 20 20 N 1.31937 * 120.94621 * 359.97438 * 19 18 17 21 21 C 1.31976 * 122.11237 * 0.02562 * 20 19 18 22 22 Cl 1.73593 * 119.55431 * 179.97438 * 21 20 19 23 23 C 1.38167 * 120.89004 * 359.71304 * 21 20 19 24 24 H 4.40642 * 5.51517 * 180.02562 * 4 1 2 25 25 H 1.09002 * 109.47220 * 281.33393 * 3 2 1 26 26 H 1.08997 * 109.47206 * 161.34020 * 3 2 1 27 27 H 0.96997 * 120.00249 * 180.02562 * 8 7 5 28 28 H 1.07998 * 119.99648 * 353.05227 * 15 13 4 29 29 H 1.07998 * 119.99698 * 168.72063 * 16 15 13 30 30 H 1.08001 * 120.50752 * 359.97438 * 18 17 16 31 31 H 1.08001 * 119.52191 * 179.97438 * 19 18 17 32 32 H 1.07994 * 120.52659 * 180.28737 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6459 0.0007 0.0000 4 7 3.1348 -1.0362 -0.9122 5 6 3.5016 -2.2584 -0.4237 6 1 4.1736 -2.8866 -0.9896 7 6 3.0093 -2.6938 0.8033 8 7 2.0338 -2.0389 1.3889 9 14 3.7365 -4.2100 1.6166 10 1 4.8658 -3.8079 2.4932 11 1 2.6932 -4.8834 2.4309 12 1 4.2288 -5.1440 0.5722 13 6 3.2227 -0.7845 -2.2334 14 8 3.6285 -1.6462 -2.9915 15 6 2.8291 0.5250 -2.7570 16 6 3.0422 0.8241 -4.0543 17 6 3.8862 -0.0535 -4.8836 18 6 5.1079 -0.5449 -4.4011 19 6 5.8663 -1.3632 -5.2119 20 7 5.4569 -1.6848 -6.4243 21 6 4.3149 -1.2455 -6.9187 22 17 3.8412 -1.7101 -8.5229 23 6 3.4886 -0.4252 -6.1748 24 1 -1.0499 -0.0002 -0.0004 25 1 3.0094 -0.2011 1.0076 26 1 3.0089 0.9744 -0.3288 27 1 1.6909 -2.3420 2.2441 28 1 2.3642 1.2497 -2.1050 29 1 2.5941 1.7071 -4.4855 30 1 5.4501 -0.2859 -3.4101 31 1 6.8087 -1.7462 -4.8492 32 1 2.5532 -0.0729 -6.5835 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000490960734.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:15:28 Heat of formation + Delta-G solvation = 93.908132 kcal Electronic energy + Delta-G solvation = -19943.562237 eV Core-core repulsion = 16705.406981 eV Total energy + Delta-G solvation = -3238.155255 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 290.056 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -39.89763 -38.68961 -36.38831 -35.58837 -33.80830 -32.33283 -31.40058 -30.69790 -30.16488 -26.73021 -25.38124 -23.67089 -23.10607 -21.29859 -18.57430 -17.99422 -17.27608 -16.61257 -16.07350 -15.89997 -15.48219 -14.79883 -14.20825 -14.13503 -14.04943 -13.71970 -13.19934 -12.90331 -12.53750 -12.39979 -11.85630 -11.63106 -11.52965 -11.36974 -11.16115 -11.08456 -10.69989 -10.49946 -10.01849 -9.58881 -9.46765 -9.28592 -9.01074 -8.75502 -8.65956 -8.07976 -7.81282 -6.54286 -4.06069 1.04255 1.44157 2.09687 2.25867 3.07006 3.14074 3.18656 3.62366 3.89411 4.02618 4.12713 4.20216 4.76370 4.85028 4.93926 4.99363 5.33425 5.35610 5.37829 5.52772 5.68984 5.85005 5.94529 6.11886 6.18577 6.41396 6.59023 6.67819 6.81013 6.91733 6.92758 7.32307 7.88470 8.12830 8.23965 8.68128 8.94674 9.12588 9.75339 10.43676 Molecular weight = 290.06amu Principal moments of inertia in cm(-1) A = 0.020127 B = 0.004552 C = 0.004031 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1390.811304 B = 6149.343572 C = 6944.604436 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.258 4.258 2 C -0.115 4.115 3 C 0.227 3.773 4 N -0.417 5.417 5 C -0.301 4.301 6 H 0.107 0.893 7 C 0.030 3.970 8 N -0.857 5.857 9 Si 0.930 3.070 10 H -0.275 1.275 11 H -0.282 1.282 12 H -0.267 1.267 13 C 0.450 3.550 14 O -0.576 6.576 15 C -0.145 4.145 16 C -0.102 4.102 17 C 0.020 3.980 18 C -0.077 4.077 19 C 0.099 3.901 20 N -0.486 5.486 21 C 0.162 3.838 22 Cl -0.055 7.055 23 C -0.148 4.148 24 H 0.200 0.800 25 H 0.118 0.882 26 H 0.063 0.937 27 H 0.273 0.727 28 H 0.125 0.875 29 H 0.132 0.868 30 H 0.134 0.866 31 H 0.157 0.843 32 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.798 7.663 -6.091 9.953 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.277 4.277 2 C -0.116 4.116 3 C 0.104 3.896 4 N -0.132 5.132 5 C -0.429 4.429 6 H 0.125 0.875 7 C -0.175 4.175 8 N -0.494 5.494 9 Si 0.757 3.243 10 H -0.200 1.200 11 H -0.208 1.208 12 H -0.192 1.192 13 C 0.242 3.758 14 O -0.463 6.463 15 C -0.167 4.167 16 C -0.124 4.124 17 C 0.011 3.989 18 C -0.098 4.098 19 C -0.056 4.056 20 N -0.197 5.197 21 C -0.003 4.003 22 Cl -0.027 7.027 23 C -0.169 4.169 24 H 0.217 0.783 25 H 0.135 0.865 26 H 0.081 0.919 27 H 0.084 0.916 28 H 0.143 0.857 29 H 0.149 0.851 30 H 0.151 0.849 31 H 0.174 0.826 32 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 2.397 6.591 -6.840 9.797 hybrid contribution -0.959 -0.381 1.155 1.548 sum 1.438 6.210 -5.686 8.542 Atomic orbital electron populations 1.24313 0.95434 1.04195 1.03792 1.23114 0.94298 0.96794 0.97437 1.18429 0.84338 0.89409 0.97462 1.43736 1.52765 1.12317 1.04355 1.19801 1.25563 0.94496 1.03053 0.87488 1.25499 0.95072 0.99307 0.97655 1.69924 1.22486 1.39767 1.17247 0.85842 0.78531 0.80813 0.79159 1.20042 1.20778 1.19158 1.18125 0.86755 0.88580 0.82311 1.90708 1.51987 1.48146 1.55420 1.23421 1.00614 0.96885 0.95812 1.21895 0.98403 0.98709 0.93347 1.19098 0.93522 0.94462 0.91804 1.22163 0.93471 0.95189 0.98958 1.22285 0.99667 0.95592 0.88058 1.66714 1.15042 1.22668 1.15306 1.21177 0.93130 0.97675 0.88340 1.98355 1.90380 1.91911 1.22058 1.21758 1.00469 1.00285 0.94390 0.78313 0.86465 0.91902 0.91606 0.85711 0.85084 0.84853 0.82553 0.84601 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.26 -5.06 19.25 29.55 0.57 -4.49 16 2 C -0.11 -2.41 11.00 -37.12 -0.41 -2.82 16 3 C 0.23 4.62 4.78 -6.83 -0.03 4.59 16 4 N -0.42 -9.74 2.59 -119.53 -0.31 -10.05 16 5 C -0.30 -7.69 9.30 -15.06 -0.14 -7.83 16 6 H 0.11 2.87 7.39 -52.49 -0.39 2.49 16 7 C 0.03 0.74 5.09 -17.44 -0.09 0.65 16 8 N -0.86 -21.04 9.11 55.51 0.51 -20.53 16 9 Si 0.93 19.45 29.57 -169.99 -5.03 14.42 16 10 H -0.27 -5.57 7.11 56.52 0.40 -5.17 16 11 H -0.28 -5.92 7.11 56.52 0.40 -5.52 16 12 H -0.27 -5.72 7.11 56.52 0.40 -5.32 16 13 C 0.45 10.06 6.61 -12.97 -0.09 9.98 16 14 O -0.58 -14.39 11.93 5.16 0.06 -14.32 16 15 C -0.15 -2.54 8.92 -37.50 -0.33 -2.88 16 16 C -0.10 -1.57 9.86 -37.10 -0.37 -1.94 16 17 C 0.02 0.33 4.50 -104.75 -0.47 -0.14 16 18 C -0.08 -1.35 6.76 -38.94 -0.26 -1.62 16 19 C 0.10 1.68 11.17 -17.62 -0.20 1.49 16 20 N -0.49 -8.79 10.32 -10.46 -0.11 -8.90 16 21 C 0.16 2.77 7.27 -17.52 -0.13 2.64 16 22 Cl -0.06 -0.82 29.10 -51.86 -1.51 -2.33 16 23 C -0.15 -2.41 9.67 -38.90 -0.38 -2.78 16 24 H 0.20 3.16 7.80 -54.10 -0.42 2.74 16 25 H 0.12 2.53 6.34 -51.93 -0.33 2.21 16 26 H 0.06 1.05 6.63 -51.93 -0.34 0.70 16 27 H 0.27 6.44 8.31 -40.82 -0.34 6.10 16 28 H 0.13 1.91 6.21 -52.49 -0.33 1.58 16 29 H 0.13 1.52 8.06 -52.49 -0.42 1.10 16 30 H 0.13 2.30 7.23 -52.49 -0.38 1.92 16 31 H 0.16 2.22 8.06 -52.49 -0.42 1.79 16 32 H 0.14 1.87 8.06 -52.49 -0.42 1.44 16 LS Contribution 302.19 15.07 4.55 4.55 Total: -1.00 -29.49 302.19 -6.75 -36.23 By element: Atomic # 1 Polarization: 8.65 SS G_CDS: -2.59 Total: 6.06 kcal Atomic # 6 Polarization: -2.82 SS G_CDS: -2.32 Total: -5.14 kcal Atomic # 7 Polarization: -39.56 SS G_CDS: 0.09 Total: -39.48 kcal Atomic # 8 Polarization: -14.39 SS G_CDS: 0.06 Total: -14.32 kcal Atomic # 14 Polarization: 19.45 SS G_CDS: -5.03 Total: 14.42 kcal Atomic # 17 Polarization: -0.82 SS G_CDS: -1.51 Total: -2.33 kcal Total LS contribution 4.55 Total: 4.55 kcal Total: -29.49 -6.75 -36.23 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000490960734.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 130.141 kcal (2) G-P(sol) polarization free energy of solvation -29.487 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 100.654 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.746 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.233 kcal (6) G-S(sol) free energy of system = (1) + (5) 93.908 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds