Wall clock time and date at job start Tue Mar 31 2020 05:46:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35921 * 117.00175 * 2 1 4 4 C 1.38764 * 120.03463 * 359.97438 * 3 2 1 5 5 C 1.38164 * 120.06715 * 180.02562 * 4 3 2 6 6 C 1.38215 * 120.11989 * 359.97438 * 5 4 3 7 7 C 1.38727 * 120.06560 * 0.03671 * 6 5 4 8 8 O 1.35923 * 120.03135 * 180.02562 * 7 6 5 9 9 C 1.42890 * 117.00075 * 356.74125 * 8 7 6 10 10 H 1.09000 * 109.47476 * 26.89544 * 9 8 7 11 11 C 1.50702 * 109.47385 * 146.90023 * 9 8 7 12 12 H 1.08006 * 119.99569 * 0.02562 * 11 9 8 13 13 C 1.37872 * 120.00253 * 179.97438 * 11 9 8 14 14 N 1.31511 * 120.00150 * 0.02562 * 13 11 9 15 15 Si 1.86798 * 119.99831 * 179.97438 * 13 11 9 16 16 H 1.48502 * 109.47171 * 60.00233 * 15 13 11 17 17 H 1.48505 * 109.46980 * 180.02562 * 15 13 11 18 18 H 1.48504 * 109.47337 * 300.00109 * 15 13 11 19 19 C 1.53003 * 109.47278 * 266.89780 * 9 8 7 20 20 Cl 1.80306 * 109.46852 * 64.99966 * 19 9 8 21 21 C 1.38691 * 120.02690 * 180.02562 * 3 2 1 22 22 Cl 1.73599 * 120.06558 * 359.70875 * 21 3 2 23 23 H 1.08997 * 109.47162 * 59.99296 * 1 2 3 24 24 H 1.08997 * 109.47213 * 179.97438 * 1 2 3 25 25 H 1.08999 * 109.46323 * 299.99740 * 1 2 3 26 26 H 1.08007 * 119.96629 * 0.03827 * 4 3 2 27 27 H 1.07997 * 119.94177 * 179.97438 * 5 4 3 28 28 H 1.07995 * 119.96587 * 180.02562 * 6 5 4 29 29 H 0.97003 * 120.00107 * 179.97438 * 14 13 11 30 30 H 1.09001 * 109.47513 * 184.99849 * 19 9 8 31 31 H 1.08996 * 109.47516 * 305.00519 * 19 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2110 0.0000 4 6 1.2911 2.3753 -0.0005 5 6 1.9177 3.6067 -0.0011 6 6 3.2978 3.6826 -0.0005 7 6 4.0577 2.5220 -0.0002 8 8 5.4148 2.5976 0.0008 9 6 5.9920 3.9028 -0.0708 10 1 5.2986 4.6304 0.3509 11 6 7.2807 3.9258 0.7101 12 1 7.6248 3.0327 1.2107 13 6 8.0210 5.0865 0.7846 14 7 7.6023 6.1738 0.1747 15 14 9.6180 5.1151 1.7532 16 1 10.5627 4.1233 1.1795 17 1 10.2179 6.4715 1.6787 18 1 9.3427 4.7734 3.1720 19 6 6.2751 4.2558 -1.5324 20 17 4.7184 4.3723 -2.4348 21 6 3.4311 1.2842 -0.0005 22 17 4.3789 -0.1702 0.0064 23 1 -0.3633 0.5139 -0.8899 24 1 -0.3633 -1.0276 -0.0005 25 1 -0.3632 0.5138 0.8900 26 1 0.2125 2.3188 -0.0003 27 1 1.3281 4.5115 -0.0019 28 1 3.7849 4.6465 -0.0005 29 1 8.1230 6.9905 0.2275 30 1 6.7957 5.2122 -1.5810 31 1 6.8970 3.4804 -1.9796 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001226630940.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:46:15 Heat of formation + Delta-G solvation = -66.778253 kcal Electronic energy + Delta-G solvation = -18860.394313 eV Core-core repulsion = 15580.545572 eV Total energy + Delta-G solvation = -3279.848740 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 290.026 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -40.05240 -38.63861 -36.23736 -35.70559 -34.84457 -33.46463 -30.50705 -29.59304 -28.68734 -27.12495 -25.36323 -22.81961 -22.18777 -20.46819 -18.29585 -17.09186 -16.31054 -16.02431 -15.72595 -15.63391 -14.85201 -14.45824 -14.13089 -13.71373 -13.30533 -13.08680 -12.65569 -12.23968 -12.00354 -11.83947 -11.52080 -11.26841 -11.16971 -11.06219 -10.91624 -10.69298 -10.64283 -10.34625 -10.18933 -9.67652 -9.42622 -9.18116 -8.70315 -7.91519 -7.47301 -6.46332 -4.53704 1.61117 1.80268 2.75963 3.13795 3.18691 3.20262 3.25060 3.37808 4.04627 4.05562 4.41929 4.90368 4.98915 5.14084 5.20422 5.28892 5.43161 5.54793 5.61488 5.92004 6.15581 6.22028 6.37963 6.45707 6.77805 6.81240 6.84701 7.10443 7.47565 7.51980 7.71503 8.20438 8.62313 9.13984 10.60842 Molecular weight = 290.03amu Principal moments of inertia in cm(-1) A = 0.021646 B = 0.005472 C = 0.004919 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1293.249110 B = 5115.565286 C = 5690.704312 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.308 6.308 3 C 0.162 3.838 4 C -0.253 4.253 5 C -0.043 4.043 6 C -0.217 4.217 7 C 0.204 3.796 8 O -0.293 6.293 9 C 0.204 3.796 10 H 0.054 0.946 11 C -0.521 4.521 12 H 0.078 0.922 13 C 0.065 3.935 14 N -0.889 5.889 15 Si 0.917 3.083 16 H -0.272 1.272 17 H -0.283 1.283 18 H -0.272 1.272 19 C -0.036 4.036 20 Cl -0.240 7.240 21 C -0.117 4.117 22 Cl -0.059 7.059 23 H 0.054 0.946 24 H 0.097 0.903 25 H 0.054 0.946 26 H 0.127 0.873 27 H 0.125 0.875 28 H 0.147 0.853 29 H 0.273 0.727 30 H 0.135 0.865 31 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.940 -5.386 -0.924 12.229 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.221 6.221 3 C 0.116 3.884 4 C -0.272 4.272 5 C -0.061 4.061 6 C -0.236 4.236 7 C 0.155 3.845 8 O -0.205 6.205 9 C 0.150 3.850 10 H 0.072 0.928 11 C -0.559 4.559 12 H 0.096 0.904 13 C -0.138 4.138 14 N -0.527 5.527 15 Si 0.743 3.257 16 H -0.197 1.197 17 H -0.209 1.209 18 H -0.197 1.197 19 C -0.099 4.099 20 Cl -0.214 7.214 21 C -0.145 4.145 22 Cl -0.030 7.030 23 H 0.073 0.927 24 H 0.115 0.885 25 H 0.073 0.927 26 H 0.145 0.855 27 H 0.143 0.857 28 H 0.165 0.835 29 H 0.083 0.917 30 H 0.153 0.847 31 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -10.653 -5.647 -1.016 12.100 hybrid contribution 0.518 0.412 0.277 0.717 sum -10.135 -5.235 -0.739 11.431 Atomic orbital electron populations 1.23024 0.78622 1.03577 1.01330 1.86110 1.21027 1.26354 1.88593 1.18203 0.89625 0.84729 0.95867 1.20859 0.99409 0.91687 1.15292 1.20693 0.93916 0.96773 0.94736 1.21418 0.94237 0.98703 1.09226 1.18458 0.85205 0.90970 0.89916 1.86230 1.14065 1.35163 1.85007 1.20641 0.94763 0.78273 0.91356 0.92839 1.20974 1.05047 0.98144 1.31721 0.90433 1.24960 0.98734 0.94693 0.95427 1.69780 1.39220 1.01418 1.42238 0.86221 0.81694 0.77425 0.80330 1.19685 1.20858 1.19682 1.25777 0.83785 1.06904 0.93402 1.98645 1.43280 1.99120 1.80397 1.19137 0.88373 0.86940 1.20055 1.98313 1.72081 1.35182 1.97455 0.92711 0.88470 0.92691 0.85470 0.85696 0.83527 0.91713 0.84728 0.90569 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.29 9.81 101.05 0.99 1.28 16 2 O -0.31 -4.60 9.95 -19.49 -0.19 -4.80 16 3 C 0.16 2.72 6.68 -39.22 -0.26 2.46 16 4 C -0.25 -3.74 9.04 -39.41 -0.36 -4.10 16 5 C -0.04 -0.67 10.04 -39.62 -0.40 -1.07 16 6 C -0.22 -4.10 7.04 -39.41 -0.28 -4.37 16 7 C 0.20 4.23 5.96 -39.22 -0.23 3.99 16 8 O -0.29 -6.77 9.19 -19.50 -0.18 -6.95 16 9 C 0.20 4.86 2.19 -27.88 -0.06 4.80 16 10 H 0.05 1.32 5.39 -51.93 -0.28 1.04 16 11 C -0.52 -13.37 8.89 -34.44 -0.31 -13.68 16 12 H 0.08 2.02 7.81 -52.48 -0.41 1.61 16 13 C 0.07 1.63 5.29 -17.82 -0.09 1.53 16 14 N -0.89 -22.61 11.29 55.43 0.63 -21.98 16 15 Si 0.92 19.71 29.54 -169.99 -5.02 14.69 16 16 H -0.27 -5.81 7.11 56.52 0.40 -5.41 16 17 H -0.28 -5.99 7.11 56.52 0.40 -5.59 16 18 H -0.27 -5.84 7.11 56.52 0.40 -5.44 16 19 C -0.04 -0.81 6.17 37.16 0.23 -0.58 16 20 Cl -0.24 -4.87 25.60 -51.86 -1.33 -6.20 16 21 C -0.12 -2.27 6.34 -39.23 -0.25 -2.52 16 22 Cl -0.06 -1.12 28.05 -51.86 -1.45 -2.57 16 23 H 0.05 0.48 7.66 -51.93 -0.40 0.08 16 24 H 0.10 0.71 8.14 -51.93 -0.42 0.29 16 25 H 0.05 0.47 7.66 -51.93 -0.40 0.07 16 26 H 0.13 1.46 6.29 -52.48 -0.33 1.13 16 27 H 0.13 1.59 8.06 -52.49 -0.42 1.17 16 28 H 0.15 2.92 5.09 -52.49 -0.27 2.65 16 29 H 0.27 6.61 8.31 -40.82 -0.34 6.27 16 30 H 0.13 3.21 5.95 -51.93 -0.31 2.90 16 31 H 0.08 1.69 8.14 -51.93 -0.42 1.27 16 LS Contribution 290.91 15.07 4.38 4.38 Total: -1.00 -26.66 290.91 -6.98 -33.64 By element: Atomic # 1 Polarization: 4.84 SS G_CDS: -2.80 Total: 2.04 kcal Atomic # 6 Polarization: -11.23 SS G_CDS: -1.02 Total: -12.25 kcal Atomic # 7 Polarization: -22.61 SS G_CDS: 0.63 Total: -21.98 kcal Atomic # 8 Polarization: -11.38 SS G_CDS: -0.37 Total: -11.75 kcal Atomic # 14 Polarization: 19.71 SS G_CDS: -5.02 Total: 14.69 kcal Atomic # 17 Polarization: -5.99 SS G_CDS: -2.78 Total: -8.77 kcal Total LS contribution 4.38 Total: 4.38 kcal Total: -26.66 -6.98 -33.64 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001226630940.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.141 kcal (2) G-P(sol) polarization free energy of solvation -26.659 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.800 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.978 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.637 kcal (6) G-S(sol) free energy of system = (1) + (5) -66.778 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds