Wall clock time and date at job start Tue Mar 31 2020 05:46:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35900 * 116.99687 * 2 1 4 4 C 1.38769 * 120.02126 * 359.97438 * 3 2 1 5 5 C 1.38266 * 120.03968 * 180.02562 * 4 3 2 6 6 Cl 1.73602 * 119.95846 * 179.97438 * 5 4 3 7 7 C 1.38310 * 120.08622 * 359.97438 * 5 4 3 8 8 C 1.38729 * 120.04269 * 0.02562 * 7 5 4 9 9 O 1.35898 * 120.02289 * 180.02562 * 8 7 5 10 10 C 1.42900 * 116.99764 * 176.49575 * 9 8 7 11 11 H 1.09004 * 109.47426 * 26.98493 * 10 9 8 12 12 C 1.50701 * 109.46973 * 146.98333 * 10 9 8 13 13 H 1.07997 * 119.99873 * 359.97438 * 12 10 9 14 14 C 1.37882 * 119.99955 * 179.97438 * 12 10 9 15 15 N 1.31509 * 120.00051 * 0.02562 * 14 12 10 16 16 Si 1.86804 * 119.99826 * 179.97438 * 14 12 10 17 17 H 1.48501 * 109.47050 * 0.02562 * 16 14 12 18 18 H 1.48501 * 109.46930 * 120.00349 * 16 14 12 19 19 H 1.48505 * 109.46837 * 240.00065 * 16 14 12 20 20 C 1.52995 * 109.47297 * 266.97926 * 10 9 8 21 21 Cl 1.80307 * 109.46678 * 65.00117 * 20 10 9 22 22 C 1.38619 * 120.01852 * 180.02562 * 3 2 1 23 23 H 1.08995 * 109.47324 * 60.00583 * 1 2 3 24 24 H 1.09007 * 109.46855 * 180.02562 * 1 2 3 25 25 H 1.08994 * 109.47471 * 300.00058 * 1 2 3 26 26 H 1.07999 * 119.98032 * 359.74697 * 4 3 2 27 27 H 1.08006 * 119.98443 * 179.97438 * 7 5 4 28 28 H 0.96997 * 120.00412 * 179.97438 * 15 14 12 29 29 H 1.08994 * 109.47428 * 185.00119 * 20 10 9 30 30 H 1.09000 * 109.47134 * 305.00403 * 20 10 9 31 31 H 1.08006 * 120.04333 * 359.95146 * 22 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 1.2905 2.3750 -0.0005 5 6 1.9178 3.6072 -0.0011 6 17 0.9707 5.0621 -0.0024 7 6 3.2989 3.6822 -0.0005 8 6 4.0575 2.5207 0.0000 9 8 5.4144 2.5948 0.0010 10 6 6.1314 1.3612 0.0794 11 1 5.5235 0.5602 -0.3414 12 6 7.4172 1.4773 -0.6981 13 1 7.6620 2.4006 -1.2019 14 6 8.2810 0.4047 -0.7661 15 7 7.9825 -0.7198 -0.1529 16 14 9.8744 0.5484 -1.7304 17 1 9.9736 1.9065 -2.3229 18 1 11.0258 0.3204 -0.8207 19 1 9.8907 -0.4673 -2.8137 20 6 6.4472 1.0468 1.5430 21 17 4.9101 0.7630 2.4418 22 6 3.4302 1.2840 -0.0005 23 1 -0.3634 0.5137 -0.8900 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3634 0.5138 0.8899 26 1 0.2120 2.3184 -0.0051 27 1 3.7871 4.6455 -0.0014 28 1 8.5900 -1.4745 -0.2011 29 1 7.0697 0.1538 1.5967 30 1 6.9788 1.8876 1.9887 31 1 4.0195 0.3788 -0.0002 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001227897215.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 05:46:17 Heat of formation + Delta-G solvation = -70.829719 kcal Electronic energy + Delta-G solvation = -18753.073317 eV Core-core repulsion = 15473.048892 eV Total energy + Delta-G solvation = -3280.024425 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 290.026 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -40.08941 -38.53568 -36.94171 -35.66685 -34.80590 -33.45148 -30.31197 -30.01881 -28.61653 -27.10965 -25.37433 -23.06581 -21.90660 -20.55374 -18.45905 -17.05945 -16.12221 -16.04255 -15.68479 -15.62842 -14.82134 -14.59219 -14.23792 -13.97447 -13.29640 -12.97430 -12.79534 -12.21218 -12.09693 -12.02485 -11.69516 -11.40668 -11.21497 -11.11609 -11.01542 -10.88557 -10.78305 -10.34257 -10.18871 -9.66826 -9.43312 -9.19637 -8.72015 -7.97021 -7.60387 -6.47218 -4.55210 1.53032 1.77543 2.21392 3.09821 3.19475 3.24704 3.37400 3.42099 3.98620 4.02576 4.35088 4.89248 5.07698 5.18921 5.21192 5.45470 5.49097 5.51136 5.59438 5.93950 6.14032 6.18936 6.33706 6.47061 6.52829 6.85027 6.87198 7.11418 7.48165 7.56849 7.70637 8.20340 8.60911 9.12718 10.60001 Molecular weight = 290.03amu Principal moments of inertia in cm(-1) A = 0.018807 B = 0.005130 C = 0.004679 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1488.457133 B = 5457.129140 C = 5983.201247 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.310 6.310 3 C 0.172 3.828 4 C -0.255 4.255 5 C 0.037 3.963 6 Cl -0.077 7.077 7 C -0.193 4.193 8 C 0.207 3.793 9 O -0.301 6.301 10 C 0.202 3.798 11 H 0.055 0.945 12 C -0.523 4.523 13 H 0.078 0.922 14 C 0.064 3.936 15 N -0.887 5.887 16 Si 0.917 3.083 17 H -0.268 1.268 18 H -0.279 1.279 19 H -0.279 1.279 20 C -0.037 4.037 21 Cl -0.238 7.238 22 C -0.221 4.221 23 H 0.054 0.946 24 H 0.097 0.903 25 H 0.054 0.946 26 H 0.131 0.869 27 H 0.136 0.864 28 H 0.272 0.728 29 H 0.135 0.865 30 H 0.075 0.925 31 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.236 3.341 0.902 11.757 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.223 6.223 3 C 0.126 3.874 4 C -0.274 4.274 5 C 0.011 3.989 6 Cl -0.049 7.049 7 C -0.213 4.213 8 C 0.158 3.842 9 O -0.213 6.213 10 C 0.148 3.852 11 H 0.073 0.927 12 C -0.560 4.560 13 H 0.096 0.904 14 C -0.139 4.139 15 N -0.524 5.524 16 Si 0.743 3.257 17 H -0.192 1.192 18 H -0.205 1.205 19 H -0.205 1.205 20 C -0.100 4.100 21 Cl -0.212 7.212 22 C -0.240 4.240 23 H 0.073 0.927 24 H 0.116 0.884 25 H 0.072 0.928 26 H 0.149 0.851 27 H 0.154 0.846 28 H 0.082 0.918 29 H 0.153 0.847 30 H 0.094 0.906 31 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges -11.122 3.226 0.993 11.623 hybrid contribution 0.381 -0.024 -0.268 0.466 sum -10.741 3.202 0.725 11.232 Atomic orbital electron populations 1.23033 0.78835 1.03645 1.01260 1.86128 1.20984 1.26652 1.88534 1.18417 0.91422 0.83444 0.94127 1.20712 0.99943 0.90555 1.16210 1.20029 0.90783 0.86439 1.01678 1.98337 1.72498 1.37085 1.96936 1.20035 0.90805 0.98188 1.12263 1.18492 0.84688 0.91631 0.89393 1.86181 1.12678 1.37051 1.85383 1.20659 0.92161 0.80977 0.91417 0.92733 1.21042 1.02603 1.00572 1.31813 0.90368 1.24982 0.99014 0.94492 0.95417 1.69799 1.37523 1.03028 1.42089 0.86116 0.81421 0.78693 0.79462 1.19230 1.20493 1.20463 1.25755 0.84906 1.05841 0.93468 1.98652 1.44492 1.97567 1.80524 1.20798 0.92190 0.99405 1.11592 0.92725 0.88431 0.92758 0.85147 0.84578 0.91768 0.84737 0.90592 0.83032 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.30 9.81 101.05 0.99 1.29 16 2 O -0.31 -4.99 10.50 -19.43 -0.20 -5.19 16 3 C 0.17 3.00 6.68 -39.24 -0.26 2.74 16 4 C -0.25 -3.95 8.82 -39.37 -0.35 -4.30 16 5 C 0.04 0.60 6.31 -39.54 -0.25 0.35 16 6 Cl -0.08 -1.05 28.95 -51.86 -1.50 -2.55 16 7 C -0.19 -3.44 9.76 -39.37 -0.38 -3.83 16 8 C 0.21 4.18 5.96 -39.24 -0.23 3.94 16 9 O -0.30 -6.79 9.73 -19.42 -0.19 -6.98 16 10 C 0.20 4.82 2.19 -27.89 -0.06 4.76 16 11 H 0.06 1.38 5.39 -51.93 -0.28 1.10 16 12 C -0.52 -13.32 8.89 -34.44 -0.31 -13.62 16 13 H 0.08 2.01 7.81 -52.49 -0.41 1.60 16 14 C 0.06 1.61 5.29 -17.82 -0.09 1.51 16 15 N -0.89 -22.70 11.29 55.43 0.63 -22.08 16 16 Si 0.92 19.56 29.54 -169.99 -5.02 14.54 16 17 H -0.27 -5.70 7.11 56.52 0.40 -5.30 16 18 H -0.28 -5.89 7.11 56.52 0.40 -5.48 16 19 H -0.28 -5.94 7.11 56.52 0.40 -5.54 16 20 C -0.04 -0.83 6.17 37.16 0.23 -0.60 16 21 Cl -0.24 -4.92 25.61 -51.86 -1.33 -6.25 16 22 C -0.22 -4.38 6.98 -39.28 -0.27 -4.65 16 23 H 0.05 0.52 7.65 -51.93 -0.40 0.12 16 24 H 0.10 0.82 8.14 -51.92 -0.42 0.40 16 25 H 0.05 0.53 7.66 -51.93 -0.40 0.13 16 26 H 0.13 1.68 6.29 -52.49 -0.33 1.34 16 27 H 0.14 2.26 8.06 -52.48 -0.42 1.84 16 28 H 0.27 6.59 8.31 -40.82 -0.34 6.25 16 29 H 0.13 3.23 5.95 -51.93 -0.31 2.92 16 30 H 0.08 1.65 8.14 -51.93 -0.42 1.23 16 31 H 0.15 3.27 5.11 -52.48 -0.27 3.00 16 LS Contribution 292.34 15.07 4.41 4.41 Total: -1.00 -25.89 292.34 -7.00 -32.89 By element: Atomic # 1 Polarization: 6.41 SS G_CDS: -2.80 Total: 3.62 kcal Atomic # 6 Polarization: -11.42 SS G_CDS: -0.99 Total: -12.41 kcal Atomic # 7 Polarization: -22.70 SS G_CDS: 0.63 Total: -22.08 kcal Atomic # 8 Polarization: -11.78 SS G_CDS: -0.39 Total: -12.17 kcal Atomic # 14 Polarization: 19.56 SS G_CDS: -5.02 Total: 14.54 kcal Atomic # 17 Polarization: -5.97 SS G_CDS: -2.83 Total: -8.80 kcal Total LS contribution 4.41 Total: 4.41 kcal Total: -25.89 -7.00 -32.89 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001227897215.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.935 kcal (2) G-P(sol) polarization free energy of solvation -25.895 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.830 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.000 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.895 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.830 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds