Wall clock time and date at job start Tue Mar 31 2020 06:00:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13602 * 1 3 3 C 1.43199 * 179.97438 * 2 1 4 4 C 1.35970 * 125.43672 * 275.19027 * 3 2 1 5 5 C 1.41590 * 107.75312 * 180.02562 * 4 3 2 6 6 C 1.40156 * 133.26496 * 180.28754 * 5 4 3 7 7 C 1.36352 * 119.89830 * 180.17402 * 6 5 4 8 8 C 1.39426 * 120.55234 * 359.51150 * 7 6 5 9 9 O 1.35861 * 119.74164 * 180.23075 * 8 7 6 10 10 C 1.42900 * 116.99817 * 356.51570 * 9 8 7 11 11 H 1.09005 * 109.47346 * 27.33857 * 10 9 8 12 12 C 1.50707 * 109.46744 * 147.33397 * 10 9 8 13 13 H 1.07991 * 119.99702 * 0.02562 * 12 10 9 14 14 C 1.37876 * 119.99461 * 180.02562 * 12 10 9 15 15 N 1.31512 * 120.00430 * 0.02562 * 14 12 10 16 16 Si 1.86808 * 119.99598 * 180.02562 * 14 12 10 17 17 H 1.48498 * 109.47020 * 0.02562 * 16 14 12 18 18 H 1.48500 * 109.46907 * 119.99657 * 16 14 12 19 19 H 1.48491 * 109.47038 * 240.00094 * 16 14 12 20 20 C 1.53002 * 109.47358 * 267.33542 * 10 9 8 21 21 Cl 1.80301 * 109.47159 * 65.00044 * 20 10 9 22 22 C 1.38236 * 120.51224 * 0.24792 * 8 7 6 23 23 C 1.39055 * 119.77451 * 0.02562 * 22 8 7 24 24 N 1.37642 * 133.10496 * 180.02562 * 23 22 8 25 25 H 0.96999 * 125.62339 * 0.03815 * 24 23 22 26 26 H 1.08001 * 126.11948 * 0.02562 * 4 3 2 27 27 H 1.07990 * 120.04866 * 359.97438 * 6 5 4 28 28 H 1.08000 * 119.71969 * 179.73748 * 7 6 5 29 29 H 0.96999 * 119.99998 * 180.02562 * 15 14 12 30 30 H 1.08998 * 109.47223 * 185.00389 * 20 10 9 31 31 H 1.09003 * 109.46898 * 305.00236 * 20 10 9 32 32 H 1.07998 * 120.11131 * 180.02562 * 22 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.3564 -0.0992 1.1033 5 6 4.7054 -0.0591 0.6750 6 6 5.9306 -0.1250 1.3524 7 6 7.0988 -0.0551 0.6525 8 6 7.0866 0.0715 -0.7360 9 8 8.2604 0.1350 -1.4172 10 6 9.4608 0.1434 -0.6420 11 1 9.2866 -0.3710 0.3031 12 6 10.5549 -0.5605 -1.4028 13 1 10.3536 -0.9725 -2.3805 14 6 11.8126 -0.6783 -0.8504 15 7 12.0574 -0.1770 0.3405 16 14 13.1690 -1.5502 -1.7936 17 1 12.6407 -2.0197 -3.0996 18 1 14.2945 -0.6095 -2.0249 19 1 13.6501 -2.7138 -1.0065 20 6 9.8798 1.5888 -0.3663 21 17 8.6382 2.3876 0.6686 22 6 5.8896 0.1333 -1.4246 23 6 4.6880 0.0693 -0.7278 24 7 3.3695 0.1038 -1.1215 25 1 3.0546 0.1857 -2.0353 26 1 3.0148 -0.1924 2.1236 27 1 5.9495 -0.2277 2.4272 28 1 8.0413 -0.1018 1.1778 29 1 12.9424 -0.2596 0.7290 30 1 10.8410 1.5967 0.1477 31 1 9.9679 2.1278 -1.3097 32 1 5.8878 0.2310 -2.5002 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001233997713.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:00:41 Heat of formation + Delta-G solvation = 40.308717 kcal Electronic energy + Delta-G solvation = -19593.608183 eV Core-core repulsion = 16353.128682 eV Total energy + Delta-G solvation = -3240.479500 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 290.056 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -41.32665 -38.90774 -36.76156 -35.47673 -34.80974 -33.47738 -31.90851 -29.82327 -29.27565 -28.04263 -25.40695 -23.66131 -22.68035 -21.20476 -20.42804 -18.96945 -17.65706 -17.00965 -15.83760 -15.43097 -15.09714 -14.96515 -14.51287 -14.30198 -13.94336 -13.43773 -13.30618 -13.19010 -13.11219 -12.86586 -12.70723 -12.09964 -11.93652 -11.67869 -11.36005 -11.14908 -11.03392 -10.68900 -10.62409 -10.28186 -9.72451 -9.53812 -9.39757 -9.04053 -8.72686 -7.82443 -7.15656 -6.49917 -4.57565 0.92527 1.92916 2.15144 2.30523 3.05669 3.07695 3.17885 3.22764 3.34424 3.38575 3.88065 4.03294 4.22044 4.37402 4.86915 4.95168 5.23695 5.43624 5.46342 5.75236 5.79846 5.95073 6.11566 6.14690 6.23364 6.49608 6.64128 6.75154 6.87570 6.89981 7.07493 7.19177 7.25759 7.46459 7.49380 7.68771 8.23336 8.60090 9.10640 10.57183 Molecular weight = 290.06amu Principal moments of inertia in cm(-1) A = 0.030001 B = 0.003856 C = 0.003634 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 933.081101 B = 7259.896067 C = 7702.338135 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.416 5.416 2 C 0.283 3.717 3 C 0.083 3.917 4 C -0.086 4.086 5 C -0.164 4.164 6 C -0.030 4.030 7 C -0.197 4.197 8 C 0.204 3.796 9 O -0.306 6.306 10 C 0.204 3.796 11 H 0.055 0.945 12 C -0.522 4.522 13 H 0.077 0.923 14 C 0.065 3.935 15 N -0.888 5.888 16 Si 0.916 3.084 17 H -0.268 1.268 18 H -0.280 1.280 19 H -0.279 1.279 20 C -0.038 4.038 21 Cl -0.238 7.238 22 C -0.209 4.209 23 C 0.166 3.834 24 N -0.576 5.576 25 H 0.419 0.581 26 H 0.151 0.849 27 H 0.124 0.876 28 H 0.144 0.856 29 H 0.272 0.728 30 H 0.134 0.866 31 H 0.075 0.925 32 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.874 0.855 0.552 8.932 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.093 5.093 2 C -0.032 4.032 3 C -0.025 4.025 4 C -0.116 4.116 5 C -0.168 4.168 6 C -0.049 4.049 7 C -0.216 4.216 8 C 0.154 3.846 9 O -0.218 6.218 10 C 0.149 3.851 11 H 0.073 0.927 12 C -0.560 4.560 13 H 0.096 0.904 14 C -0.139 4.139 15 N -0.525 5.525 16 Si 0.742 3.258 17 H -0.193 1.193 18 H -0.205 1.205 19 H -0.205 1.205 20 C -0.100 4.100 21 Cl -0.212 7.212 22 C -0.231 4.231 23 C 0.055 3.945 24 N -0.182 5.182 25 H 0.256 0.744 26 H 0.169 0.831 27 H 0.142 0.858 28 H 0.161 0.839 29 H 0.082 0.918 30 H 0.152 0.848 31 H 0.093 0.907 32 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges -10.593 0.959 0.420 10.645 hybrid contribution 1.107 -0.202 -0.660 1.305 sum -9.486 0.757 -0.240 9.519 Atomic orbital electron populations 1.81290 1.11379 1.10737 1.05907 1.24498 0.91030 0.93143 0.94570 1.15012 0.82552 1.17006 0.87944 1.20790 0.90938 1.02847 0.97056 1.17928 0.93255 1.13275 0.92302 1.20123 0.89727 0.95843 0.99202 1.21213 0.99870 1.06740 0.93794 1.18719 0.86550 0.89245 0.90110 1.86132 1.12792 1.85362 1.37498 1.20623 0.79543 0.91484 0.93412 0.92724 1.21048 0.93586 1.36393 1.04988 0.90438 1.24972 0.98686 0.95171 0.95065 1.69794 1.23177 1.44304 1.15198 0.86128 0.80565 0.79187 0.79892 1.19263 1.20525 1.20469 1.25772 0.94082 0.95093 0.95075 1.98649 1.63587 1.84368 1.74579 1.18823 0.87272 1.17535 0.99505 1.17688 0.83348 1.00040 0.93393 1.41576 1.03751 1.65104 1.07727 0.74361 0.83129 0.85764 0.83865 0.91781 0.84793 0.90668 0.85658 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.42 -5.53 18.54 41.84 0.78 -4.75 16 2 C 0.28 3.29 15.86 -22.47 -0.36 2.93 16 3 C 0.08 0.94 6.87 -83.87 -0.58 0.37 16 4 C -0.09 -1.00 10.76 -39.12 -0.42 -1.42 16 5 C -0.16 -2.30 6.16 -106.90 -0.66 -2.96 16 6 C -0.03 -0.44 10.05 -39.54 -0.40 -0.84 16 7 C -0.20 -3.42 6.92 -39.82 -0.28 -3.70 16 8 C 0.20 3.77 5.96 -39.14 -0.23 3.53 16 9 O -0.31 -6.52 9.72 -19.30 -0.19 -6.70 16 10 C 0.20 4.59 2.19 -27.88 -0.06 4.53 16 11 H 0.06 1.28 5.38 -51.93 -0.28 1.01 16 12 C -0.52 -12.84 8.89 -34.44 -0.31 -13.14 16 13 H 0.08 1.93 7.81 -52.49 -0.41 1.52 16 14 C 0.06 1.56 5.29 -17.82 -0.09 1.46 16 15 N -0.89 -21.90 11.30 55.43 0.63 -21.28 16 16 Si 0.92 19.02 29.54 -169.99 -5.02 14.00 16 17 H -0.27 -5.57 7.11 56.52 0.40 -5.16 16 18 H -0.28 -5.76 7.11 56.52 0.40 -5.36 16 19 H -0.28 -5.79 7.11 56.52 0.40 -5.39 16 20 C -0.04 -0.80 6.17 37.16 0.23 -0.57 16 21 Cl -0.24 -4.55 25.53 -51.86 -1.32 -5.87 16 22 C -0.21 -3.35 10.00 -39.28 -0.39 -3.74 16 23 C 0.17 2.35 7.25 -83.95 -0.61 1.74 16 24 N -0.58 -6.54 6.20 -8.36 -0.05 -6.59 16 25 H 0.42 3.59 8.96 -40.82 -0.37 3.23 16 26 H 0.15 1.34 8.06 -52.49 -0.42 0.92 16 27 H 0.12 1.51 8.06 -52.49 -0.42 1.09 16 28 H 0.14 2.67 5.05 -52.49 -0.26 2.41 16 29 H 0.27 6.38 8.31 -40.82 -0.34 6.04 16 30 H 0.13 3.07 5.96 -51.93 -0.31 2.76 16 31 H 0.07 1.57 8.14 -51.93 -0.42 1.14 16 32 H 0.13 1.84 8.06 -52.49 -0.42 1.41 16 LS Contribution 298.30 15.07 4.50 4.50 Total: -1.00 -25.58 298.30 -7.29 -32.88 By element: Atomic # 1 Polarization: 8.07 SS G_CDS: -2.46 Total: 5.61 kcal Atomic # 6 Polarization: -7.64 SS G_CDS: -4.15 Total: -11.79 kcal Atomic # 7 Polarization: -33.97 SS G_CDS: 1.35 Total: -32.62 kcal Atomic # 8 Polarization: -6.52 SS G_CDS: -0.19 Total: -6.70 kcal Atomic # 14 Polarization: 19.02 SS G_CDS: -5.02 Total: 14.00 kcal Atomic # 17 Polarization: -4.55 SS G_CDS: -1.32 Total: -5.87 kcal Total LS contribution 4.50 Total: 4.50 kcal Total: -25.58 -7.29 -32.88 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001233997713.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 73.186 kcal (2) G-P(sol) polarization free energy of solvation -25.583 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 47.603 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.294 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.878 kcal (6) G-S(sol) free energy of system = (1) + (5) 40.309 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds