Wall clock time and date at job start Tue Mar 31 2020 06:21:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35849 * 117.00190 * 2 1 4 4 C 1.38866 * 119.93427 * 359.97438 * 3 2 1 5 5 C 1.37846 * 120.08594 * 179.97438 * 4 3 2 6 6 C 1.39486 * 119.94857 * 0.02562 * 5 4 3 7 7 C 1.48210 * 120.06389 * 180.02562 * 6 5 4 8 8 C 1.40098 * 119.99623 * 5.00511 * 7 6 5 9 9 N 1.32154 * 120.29696 * 180.29595 * 8 7 6 10 10 C 1.31904 * 120.28434 * 359.44291 * 9 8 7 11 11 C 1.40812 * 119.97566 * 0.55653 * 10 9 8 12 12 C 1.41324 * 120.14115 * 179.70057 * 11 10 9 13 13 H 1.07992 * 119.99975 * 155.20022 * 12 11 10 14 14 C 1.40043 * 119.99940 * 335.20376 * 12 11 10 15 15 N 1.30744 * 119.99912 * 342.16208 * 14 12 11 16 16 Si 1.86795 * 120.00044 * 162.16530 * 14 12 11 17 17 H 1.48503 * 109.47125 * 94.66067 * 16 14 12 18 18 H 1.48495 * 109.47247 * 214.65744 * 16 14 12 19 19 H 1.48501 * 109.47104 * 334.66137 * 16 14 12 20 20 N 1.32560 * 119.99147 * 185.02313 * 7 6 5 21 21 C 1.39451 * 119.86905 * 0.28127 * 6 5 4 22 22 C 1.37964 * 119.91652 * 359.44393 * 21 6 5 23 23 Cl 1.73591 * 119.97823 * 180.25514 * 22 21 6 24 24 H 1.09004 * 109.47383 * 300.00789 * 1 2 3 25 25 H 1.09003 * 109.46462 * 60.00214 * 1 2 3 26 26 H 1.08993 * 109.47375 * 180.02562 * 1 2 3 27 27 H 1.08004 * 119.95644 * 0.02562 * 4 3 2 28 28 H 1.08001 * 120.02617 * 180.02562 * 5 4 3 29 29 H 1.07999 * 119.85065 * 0.02562 * 8 7 6 30 30 H 1.08000 * 120.00800 * 180.28039 * 10 9 8 31 31 H 0.96993 * 119.99696 * 180.02562 * 15 14 12 32 32 H 1.08000 * 120.04395 * 179.72576 * 21 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0458 1.2104 0.0000 4 6 1.2882 2.3742 -0.0005 5 6 1.9108 3.6040 0.0000 6 6 3.3036 3.6794 0.0005 7 6 3.9757 5.0004 0.0017 8 6 3.2160 6.1727 0.1081 9 7 3.8086 7.3539 0.1038 10 6 5.1215 7.4390 0.0104 11 6 5.8966 6.2683 -0.0971 12 6 7.3031 6.3557 -0.2038 13 1 7.9208 5.5268 0.1084 14 6 7.8957 7.5174 -0.7143 15 7 7.1810 8.3662 -1.4057 16 14 9.7073 7.8539 -0.4076 17 1 10.5046 7.3585 -1.5584 18 1 9.9197 9.3152 -0.2508 19 1 10.1379 7.1554 0.8301 20 7 5.2955 5.0724 -0.0983 21 6 4.0625 2.5095 -0.0054 22 6 3.4337 1.2815 -0.0002 23 17 4.3768 -0.1759 -0.0009 24 1 -0.3634 0.5140 0.8899 25 1 -0.3632 0.5138 -0.8901 26 1 -0.3634 -1.0276 0.0005 27 1 0.2097 2.3156 -0.0005 28 1 1.3206 4.5085 0.0000 29 1 2.1408 6.1109 0.1895 30 1 5.6015 8.4065 0.0119 31 1 7.5916 9.1706 -1.7596 32 1 5.1410 2.5646 -0.0095 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001240029737.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:21:47 Heat of formation + Delta-G solvation = 13.196612 kcal Electronic energy + Delta-G solvation = -19386.847720 eV Core-core repulsion = 16145.192551 eV Total energy + Delta-G solvation = -3241.655169 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 290.056 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -40.16178 -39.12420 -37.33123 -36.18097 -34.22895 -32.74914 -31.29699 -30.69520 -28.78237 -27.36525 -26.06673 -23.40557 -22.96690 -21.48655 -20.95339 -18.28540 -17.76494 -16.54984 -15.91985 -15.85927 -15.67498 -15.35992 -14.93049 -14.24865 -13.90342 -13.64425 -13.48978 -13.31874 -12.91670 -12.31861 -11.97303 -11.75180 -11.48226 -11.43520 -11.33391 -11.14165 -11.01317 -10.86666 -10.66855 -10.45759 -9.93768 -9.84250 -9.41135 -8.74040 -8.40881 -7.53653 -7.31500 -7.11765 -4.78349 1.13139 1.35968 2.35634 2.45180 2.77541 2.96269 3.00294 3.06693 3.17068 3.74022 3.89461 4.42799 4.76177 4.87111 4.95050 5.00994 5.14851 5.31803 5.45894 5.55065 5.59616 5.83952 5.87881 6.08077 6.19549 6.24333 6.43889 6.66996 6.82039 6.86855 6.98881 7.15802 7.27422 7.52628 8.07260 8.34508 8.41797 9.05813 9.53369 9.87017 Molecular weight = 290.06amu Principal moments of inertia in cm(-1) A = 0.024108 B = 0.003965 C = 0.003443 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1161.183401 B = 7059.790985 C = 8130.271307 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.308 6.308 3 C 0.127 3.873 4 C -0.201 4.201 5 C -0.064 4.064 6 C -0.039 4.039 7 C 0.133 3.867 8 C -0.088 4.088 9 N -0.442 5.442 10 C 0.014 3.986 11 C 0.229 3.771 12 C -0.421 4.421 13 H 0.092 0.908 14 C 0.075 3.925 15 N -0.782 5.782 16 Si 0.925 3.075 17 H -0.267 1.267 18 H -0.272 1.272 19 H -0.256 1.256 20 N -0.521 5.521 21 C -0.040 4.040 22 C -0.071 4.071 23 Cl -0.066 7.066 24 H 0.056 0.944 25 H 0.056 0.944 26 H 0.098 0.902 27 H 0.135 0.865 28 H 0.136 0.864 29 H 0.131 0.869 30 H 0.160 0.840 31 H 0.290 0.710 32 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.481 -9.957 1.786 13.201 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.221 6.221 3 C 0.081 3.919 4 C -0.220 4.220 5 C -0.083 4.083 6 C -0.041 4.041 7 C -0.010 4.010 8 C -0.245 4.245 9 N -0.154 5.154 10 C -0.157 4.157 11 C 0.100 3.900 12 C -0.455 4.455 13 H 0.110 0.890 14 C -0.146 4.146 15 N -0.407 5.407 16 Si 0.748 3.252 17 H -0.192 1.192 18 H -0.196 1.196 19 H -0.180 1.180 20 N -0.240 5.240 21 C -0.060 4.060 22 C -0.098 4.098 23 Cl -0.037 7.037 24 H 0.074 0.926 25 H 0.074 0.926 26 H 0.117 0.883 27 H 0.153 0.847 28 H 0.154 0.846 29 H 0.148 0.852 30 H 0.177 0.823 31 H 0.101 0.899 32 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges -8.352 -10.076 1.648 13.190 hybrid contribution 0.508 0.282 -0.090 0.588 sum -7.844 -9.793 1.558 12.644 Atomic orbital electron populations 1.23065 0.78485 1.03836 1.01440 1.86116 1.21200 1.26241 1.88576 1.18719 0.90405 0.84924 0.97865 1.21016 0.99848 0.91394 1.09721 1.21150 0.93718 0.97377 0.96040 1.18556 0.92118 0.91723 1.01706 1.20208 0.91714 0.91515 0.97595 1.22606 0.99064 0.88555 1.14243 1.67900 1.12293 1.26579 1.08605 1.23862 0.88613 1.00602 1.02641 1.19304 0.94929 0.87185 0.88546 1.19378 0.90153 1.00641 1.35324 0.88954 1.26055 1.01949 0.94636 0.91990 1.69728 1.39150 1.09738 1.22054 0.86016 0.80307 0.78595 0.80308 1.19161 1.19649 1.17970 1.68896 1.07761 1.27922 1.19398 1.21180 1.01801 0.88416 0.94556 1.20078 0.88429 0.88599 1.12669 1.98339 1.72114 1.35989 1.97245 0.92574 0.92564 0.88315 0.84679 0.84610 0.85168 0.82293 0.89902 0.82947 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.22 9.81 101.05 0.99 1.21 16 2 O -0.31 -3.98 9.94 -19.27 -0.19 -4.18 16 3 C 0.13 1.85 6.69 -39.08 -0.26 1.59 16 4 C -0.20 -2.65 9.02 -39.49 -0.36 -3.00 16 5 C -0.06 -0.97 9.41 -39.26 -0.37 -1.34 16 6 C -0.04 -0.74 5.88 -104.88 -0.62 -1.35 16 7 C 0.13 3.03 6.73 -82.76 -0.56 2.48 16 8 C -0.09 -2.00 10.61 -16.72 -0.18 -2.18 16 9 N -0.44 -11.09 10.47 -12.04 -0.13 -11.22 16 10 C 0.01 0.36 9.88 -16.55 -0.16 0.20 16 11 C 0.23 6.10 6.41 -84.84 -0.54 5.55 16 12 C -0.42 -10.77 9.29 -37.73 -0.35 -11.12 16 13 H 0.09 2.30 7.91 -52.49 -0.42 1.88 16 14 C 0.08 1.76 5.13 -17.34 -0.09 1.67 16 15 N -0.78 -18.86 10.97 55.55 0.61 -18.25 16 16 Si 0.92 17.36 29.60 -169.99 -5.03 12.33 16 17 H -0.27 -4.97 7.11 56.52 0.40 -4.56 16 18 H -0.27 -4.94 7.11 56.52 0.40 -4.54 16 19 H -0.26 -4.79 7.11 56.52 0.40 -4.39 16 20 N -0.52 -13.31 9.56 -7.51 -0.07 -13.38 16 21 C -0.04 -0.73 9.35 -39.23 -0.37 -1.10 16 22 C -0.07 -1.15 6.33 -39.41 -0.25 -1.40 16 23 Cl -0.07 -1.00 28.49 -51.86 -1.48 -2.48 16 24 H 0.06 0.40 7.66 -51.93 -0.40 0.00 16 25 H 0.06 0.40 7.65 -51.93 -0.40 0.01 16 26 H 0.10 0.59 8.14 -51.93 -0.42 0.17 16 27 H 0.14 1.32 6.28 -52.48 -0.33 0.99 16 28 H 0.14 1.82 6.21 -52.49 -0.33 1.50 16 29 H 0.13 2.47 6.21 -52.49 -0.33 2.14 16 30 H 0.16 4.15 6.17 -52.49 -0.32 3.82 16 31 H 0.29 6.25 8.29 -40.82 -0.34 5.91 16 32 H 0.15 2.95 7.55 -52.49 -0.40 2.56 16 LS Contribution 296.95 15.07 4.47 4.47 Total: -1.00 -28.61 296.95 -7.39 -36.00 By element: Atomic # 1 Polarization: 7.95 SS G_CDS: -2.47 Total: 5.49 kcal Atomic # 6 Polarization: -5.68 SS G_CDS: -3.11 Total: -8.79 kcal Atomic # 7 Polarization: -43.26 SS G_CDS: 0.41 Total: -42.85 kcal Atomic # 8 Polarization: -3.98 SS G_CDS: -0.19 Total: -4.18 kcal Atomic # 14 Polarization: 17.36 SS G_CDS: -5.03 Total: 12.33 kcal Atomic # 17 Polarization: -1.00 SS G_CDS: -1.48 Total: -2.48 kcal Total LS contribution 4.47 Total: 4.47 kcal Total: -28.61 -7.39 -36.00 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001240029737.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 49.198 kcal (2) G-P(sol) polarization free energy of solvation -28.611 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.588 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.391 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.002 kcal (6) G-S(sol) free energy of system = (1) + (5) 13.197 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds