Wall clock time and date at job start Tue Mar 31 2020 06:21:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35925 * 116.99909 * 2 1 4 4 C 1.38779 * 119.99991 * 359.97438 * 3 2 1 5 5 C 1.38262 * 120.21956 * 180.02562 * 4 3 2 6 6 C 1.38031 * 120.20783 * 359.73644 * 5 4 3 7 7 C 1.39416 * 119.98965 * 0.51475 * 6 5 4 8 8 C 1.48276 * 120.10562 * 179.76524 * 7 6 5 9 9 C 1.40047 * 119.98540 * 46.57557 * 8 7 6 10 10 N 1.32171 * 120.29443 * 179.97438 * 9 8 7 11 11 C 1.31885 * 120.28491 * 359.70721 * 10 9 8 12 12 C 1.40815 * 119.96464 * 0.59455 * 11 10 9 13 13 C 1.41331 * 120.14717 * 179.68245 * 12 11 10 14 14 H 1.08000 * 120.00188 * 204.36138 * 13 12 11 15 15 C 1.40049 * 119.99684 * 24.35380 * 13 12 11 16 16 N 1.30726 * 120.00364 * 17.47629 * 15 13 12 17 17 Si 1.86804 * 120.00068 * 197.47151 * 15 13 12 18 18 H 1.48501 * 109.47011 * 265.02176 * 17 15 13 19 19 H 1.48500 * 109.47052 * 25.01740 * 17 15 13 20 20 H 1.48498 * 109.47186 * 145.01588 * 17 15 13 21 21 N 1.32517 * 119.98773 * 226.59788 * 8 7 6 22 22 C 1.38610 * 120.00010 * 179.97438 * 3 2 1 23 23 Cl 1.73607 * 120.10271 * 359.95823 * 22 3 2 24 24 H 1.08995 * 109.47369 * 299.99605 * 1 2 3 25 25 H 1.08998 * 109.47347 * 60.00232 * 1 2 3 26 26 H 1.09000 * 109.46806 * 179.97438 * 1 2 3 27 27 H 1.08006 * 119.88712 * 0.03803 * 4 3 2 28 28 H 1.08001 * 119.89410 * 180.02562 * 5 4 3 29 29 H 1.07997 * 120.00095 * 180.26484 * 6 5 4 30 30 H 1.08005 * 119.85527 * 0.02684 * 9 8 7 31 31 H 1.08008 * 120.01932 * 180.27410 * 11 10 9 32 32 H 0.97003 * 120.00579 * 179.97438 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2111 0.0000 4 6 1.2902 2.3750 -0.0005 5 6 1.9132 3.6093 -0.0011 6 6 3.2910 3.6919 0.0044 7 6 4.0588 2.5282 -0.0003 8 6 5.5391 2.6140 0.0003 9 6 6.1895 3.4831 0.8850 10 7 7.5087 3.5640 0.8911 11 6 8.2243 2.8226 0.0680 12 6 7.5820 1.9495 -0.8308 13 6 8.3449 1.1582 -1.7193 14 1 7.9054 0.8035 -2.6399 15 6 9.6708 0.8340 -1.4059 16 7 10.1006 0.9555 -0.1773 17 14 10.8253 0.2279 -2.7435 18 1 10.8369 -1.2571 -2.7519 19 1 10.3599 0.7267 -4.0625 20 1 12.1969 0.7321 -2.4795 21 7 6.2461 1.8684 -0.8366 22 6 3.4303 1.2837 0.0005 23 17 4.3784 -0.1706 0.0023 24 1 -0.3634 0.5137 0.8900 25 1 -0.3634 0.5138 -0.8900 26 1 -0.3633 -1.0277 -0.0005 27 1 0.2117 2.3163 -0.0003 28 1 1.3198 4.5117 -0.0011 29 1 3.7741 4.6578 0.0083 30 1 5.6106 4.0895 1.5660 31 1 9.3023 2.8889 0.0797 32 1 11.0189 0.7306 0.0399 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001241857443.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:21:55 Heat of formation + Delta-G solvation = 16.856700 kcal Electronic energy + Delta-G solvation = -19791.474489 eV Core-core repulsion = 16549.978033 eV Total energy + Delta-G solvation = -3241.496456 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 290.056 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -40.06811 -39.03816 -37.24998 -35.70219 -34.18691 -32.75955 -31.35429 -30.26171 -28.72801 -27.26389 -26.14749 -23.51756 -22.56181 -21.66660 -20.91492 -18.29674 -17.18324 -16.41511 -16.12541 -15.81540 -15.69203 -15.24422 -14.92274 -14.49987 -13.95765 -13.74568 -13.14805 -13.04679 -12.72592 -12.25536 -11.82681 -11.64347 -11.43829 -11.26692 -11.18832 -10.98137 -10.93557 -10.91582 -10.44480 -10.18780 -9.82594 -9.67405 -9.35178 -8.65746 -7.98855 -7.60519 -7.36691 -7.05180 -4.70640 1.20525 1.48958 2.44065 2.78432 2.80248 2.99641 3.04269 3.10910 3.26924 3.78014 3.85429 4.44138 4.79276 4.87173 5.05708 5.06603 5.22836 5.34947 5.40876 5.49862 5.70829 5.79515 5.92660 6.17068 6.22938 6.39172 6.45623 6.68493 6.73044 6.92005 7.00308 7.21754 7.35876 7.59837 8.14531 8.41182 8.48446 9.12787 9.60746 9.93660 Molecular weight = 290.06amu Principal moments of inertia in cm(-1) A = 0.023332 B = 0.004865 C = 0.004277 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1199.761175 B = 5754.184304 C = 6544.952097 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.307 6.307 3 C 0.127 3.873 4 C -0.206 4.206 5 C -0.082 4.082 6 C -0.132 4.132 7 C 0.034 3.966 8 C 0.122 3.878 9 C -0.080 4.080 10 N -0.443 5.443 11 C 0.015 3.985 12 C 0.226 3.774 13 C -0.419 4.419 14 H 0.091 0.909 15 C 0.075 3.925 16 N -0.783 5.783 17 Si 0.923 3.077 18 H -0.267 1.267 19 H -0.257 1.257 20 H -0.272 1.272 21 N -0.496 5.496 22 C -0.045 4.045 23 Cl -0.032 7.032 24 H 0.054 0.946 25 H 0.054 0.946 26 H 0.098 0.902 27 H 0.131 0.869 28 H 0.129 0.871 29 H 0.134 0.866 30 H 0.130 0.870 31 H 0.161 0.839 32 H 0.289 0.711 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.476 0.883 -0.034 13.505 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.220 6.220 3 C 0.081 3.919 4 C -0.226 4.226 5 C -0.101 4.101 6 C -0.151 4.151 7 C 0.032 3.968 8 C -0.022 4.022 9 C -0.237 4.237 10 N -0.155 5.155 11 C -0.156 4.156 12 C 0.097 3.903 13 C -0.452 4.452 14 H 0.109 0.891 15 C -0.146 4.146 16 N -0.408 5.408 17 Si 0.746 3.254 18 H -0.192 1.192 19 H -0.180 1.180 20 H -0.197 1.197 21 N -0.214 5.214 22 C -0.073 4.073 23 Cl -0.003 7.003 24 H 0.073 0.927 25 H 0.073 0.927 26 H 0.117 0.883 27 H 0.149 0.851 28 H 0.147 0.853 29 H 0.152 0.848 30 H 0.147 0.853 31 H 0.178 0.822 32 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -13.126 0.528 0.134 13.138 hybrid contribution 0.319 -0.345 -0.371 0.598 sum -12.808 0.184 -0.237 12.811 Atomic orbital electron populations 1.23041 0.78664 1.03827 1.01170 1.86171 1.21010 1.26135 1.88675 1.18568 0.90335 0.84987 0.98039 1.21105 0.99695 0.91794 1.09970 1.20837 0.94265 0.96913 0.98045 1.21106 0.93221 0.97667 1.03109 1.18441 0.92208 0.90550 0.95619 1.20146 0.91145 0.95295 0.95616 1.22562 0.91495 1.05140 1.04456 1.67918 1.06365 1.20984 1.20231 1.23893 1.00800 0.94823 0.96071 1.19331 0.87708 0.91226 0.92007 1.19359 0.94532 1.26602 1.04731 0.89070 1.26031 0.98754 0.93494 0.96317 1.69722 1.18291 1.34164 1.18648 0.86042 0.78610 0.79509 0.81201 1.19242 1.18023 1.19682 1.69105 1.07424 1.21186 1.23689 1.20285 0.88368 0.89623 1.09064 1.98391 1.71340 1.33991 1.96591 0.92740 0.92712 0.88318 0.85112 0.85321 0.84850 0.85263 0.82225 0.90003 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.26 9.81 101.05 0.99 1.25 16 2 O -0.31 -4.54 9.95 -19.51 -0.19 -4.74 16 3 C 0.13 2.05 6.67 -39.24 -0.26 1.79 16 4 C -0.21 -2.68 9.03 -39.37 -0.36 -3.04 16 5 C -0.08 -1.06 10.03 -39.65 -0.40 -1.45 16 6 C -0.13 -2.09 9.42 -39.22 -0.37 -2.46 16 7 C 0.03 0.68 5.64 -104.89 -0.59 0.09 16 8 C 0.12 2.88 5.89 -82.77 -0.49 2.39 16 9 C -0.08 -1.87 10.61 -16.73 -0.18 -2.05 16 10 N -0.44 -11.35 10.47 -12.05 -0.13 -11.48 16 11 C 0.02 0.40 9.88 -16.55 -0.16 0.24 16 12 C 0.23 6.14 6.41 -84.84 -0.54 5.59 16 13 C -0.42 -10.97 9.29 -37.73 -0.35 -11.32 16 14 H 0.09 2.35 7.91 -52.49 -0.41 1.94 16 15 C 0.08 1.80 5.15 -17.34 -0.09 1.71 16 16 N -0.78 -19.33 10.91 55.55 0.61 -18.72 16 17 Si 0.92 17.85 29.59 -169.99 -5.03 12.82 16 18 H -0.27 -5.14 7.11 56.52 0.40 -4.74 16 19 H -0.26 -4.94 7.11 56.52 0.40 -4.54 16 20 H -0.27 -5.07 7.11 56.52 0.40 -4.67 16 21 N -0.50 -12.99 8.87 -7.51 -0.07 -13.06 16 22 C -0.04 -0.88 6.34 -39.00 -0.25 -1.13 16 23 Cl -0.03 -0.69 26.46 -51.86 -1.37 -2.06 16 24 H 0.05 0.42 7.66 -51.93 -0.40 0.02 16 25 H 0.05 0.43 7.66 -51.93 -0.40 0.04 16 26 H 0.10 0.71 8.14 -51.93 -0.42 0.28 16 27 H 0.13 1.25 6.28 -52.48 -0.33 0.92 16 28 H 0.13 1.20 8.06 -52.49 -0.42 0.77 16 29 H 0.13 1.92 7.97 -52.49 -0.42 1.50 16 30 H 0.13 2.62 7.97 -52.48 -0.42 2.20 16 31 H 0.16 4.24 6.12 -52.48 -0.32 3.92 16 32 H 0.29 6.38 8.29 -40.82 -0.34 6.04 16 LS Contribution 297.81 15.07 4.49 4.49 Total: -1.00 -30.02 297.81 -7.42 -37.44 By element: Atomic # 1 Polarization: 6.38 SS G_CDS: -2.68 Total: 3.70 kcal Atomic # 6 Polarization: -5.34 SS G_CDS: -3.04 Total: -8.39 kcal Atomic # 7 Polarization: -43.67 SS G_CDS: 0.41 Total: -43.26 kcal Atomic # 8 Polarization: -4.54 SS G_CDS: -0.19 Total: -4.74 kcal Atomic # 14 Polarization: 17.85 SS G_CDS: -5.03 Total: 12.82 kcal Atomic # 17 Polarization: -0.69 SS G_CDS: -1.37 Total: -2.06 kcal Total LS contribution 4.49 Total: 4.49 kcal Total: -30.02 -7.42 -37.44 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001241857443.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 54.294 kcal (2) G-P(sol) polarization free energy of solvation -30.021 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.274 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.417 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.437 kcal (6) G-S(sol) free energy of system = (1) + (5) 16.857 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds