Wall clock time and date at job start Tue Mar 31 2020 06:22:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35601 * 116.99991 * 2 1 4 4 N 1.32374 * 119.53175 * 359.97438 * 3 2 1 5 5 C 1.31698 * 121.81360 * 179.97438 * 4 3 2 6 6 C 1.39554 * 120.64412 * 0.02562 * 5 4 3 7 7 C 1.47862 * 120.49144 * 179.97438 * 6 5 4 8 8 C 1.39966 * 119.45607 * 4.72487 * 7 6 5 9 9 C 1.36558 * 119.46560 * 179.76451 * 8 7 6 10 10 C 1.41328 * 118.41904 * 0.49864 * 9 8 7 11 11 C 1.41038 * 120.54922 * 179.72537 * 10 9 8 12 12 H 1.08002 * 120.00037 * 203.73211 * 11 10 9 13 13 C 1.39993 * 119.99804 * 23.72530 * 11 10 9 14 14 N 1.30810 * 120.00170 * 17.63162 * 13 11 10 15 15 Si 1.86808 * 119.99887 * 197.62816 * 13 11 10 16 16 H 1.48498 * 109.46911 * 60.00129 * 15 13 11 17 17 H 1.48494 * 109.46977 * 180.02562 * 15 13 11 18 18 H 1.48501 * 109.47085 * 300.00501 * 15 13 11 19 19 C 1.40951 * 118.90339 * 359.74282 * 10 9 8 20 20 N 1.31259 * 120.40020 * 0.02562 * 19 10 9 21 21 C 1.40191 * 119.01291 * 359.97438 * 6 5 4 22 22 C 1.38128 * 118.34829 * 359.75314 * 21 6 5 23 23 Cl 1.73597 * 120.37801 * 180.24002 * 22 21 6 24 24 H 1.09000 * 109.47142 * 60.00627 * 1 2 3 25 25 H 1.09008 * 109.46998 * 180.02562 * 1 2 3 26 26 H 1.09001 * 109.47150 * 299.99895 * 1 2 3 27 27 H 1.07999 * 119.67270 * 180.02562 * 5 4 3 28 28 H 1.07999 * 120.26453 * 0.02562 * 8 7 6 29 29 H 1.07993 * 120.79278 * 180.24244 * 9 8 7 30 30 H 0.96997 * 119.99451 * 179.97438 * 14 13 11 31 31 H 1.07999 * 119.79856 * 179.97438 * 19 10 9 32 32 H 1.08000 * 120.82406 * 180.02562 * 21 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0446 1.2082 0.0000 4 7 1.3146 2.3125 -0.0005 5 6 1.8653 3.5088 0.0000 6 6 3.2534 3.6529 0.0005 7 6 3.8681 4.9977 0.0005 8 6 3.0495 6.1286 0.1003 9 6 3.6174 7.3705 0.1051 10 6 5.0232 7.4677 -0.0026 11 6 5.6563 8.7280 -0.0080 12 1 6.6312 8.8406 -0.4589 13 6 5.0210 9.8329 0.5710 14 7 4.0293 9.6543 1.4051 15 14 5.5895 11.5625 0.1524 16 1 5.4462 11.7908 -1.3079 17 1 4.7609 12.5483 0.8917 18 1 7.0137 11.7231 0.5411 19 6 5.7821 6.2843 -0.1048 20 7 5.1898 5.1130 -0.1003 21 6 4.0562 2.5036 0.0011 22 6 3.4353 1.2698 0.0063 23 17 4.3785 -0.1876 0.0136 24 1 -0.3633 0.5137 -0.8900 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3633 0.5138 0.8900 27 1 1.2365 4.3868 -0.0001 28 1 1.9778 6.0198 0.1771 29 1 3.0065 8.2574 0.1851 30 1 3.5894 10.4200 1.8065 31 1 6.8573 6.3418 -0.1882 32 1 5.1335 2.5811 0.0019 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001242929766.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:22:06 Heat of formation + Delta-G solvation = 11.040280 kcal Electronic energy + Delta-G solvation = -19275.688816 eV Core-core repulsion = 16033.940141 eV Total energy + Delta-G solvation = -3241.748675 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 290.056 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -40.35651 -38.62736 -37.47098 -36.32218 -34.47169 -32.28221 -31.41271 -30.75950 -29.19013 -27.24824 -25.59042 -23.46929 -23.07190 -21.40090 -20.86850 -18.26617 -17.63977 -16.92627 -16.40425 -15.92291 -15.59318 -14.91584 -14.50311 -13.96016 -13.85859 -13.76987 -13.59275 -12.94173 -12.62068 -12.34695 -11.89685 -11.85045 -11.77117 -11.67294 -11.55268 -11.24554 -11.04082 -10.86315 -10.77946 -10.15485 -9.71160 -9.44869 -9.36885 -8.52754 -8.48072 -8.25354 -7.41797 -7.12247 -4.69459 1.13500 1.39858 2.31450 2.51717 2.82541 2.87182 2.88969 3.03173 3.19558 3.63352 3.94918 4.43887 4.55643 4.99627 5.24453 5.31857 5.35295 5.45465 5.46147 5.49429 5.64499 6.00032 6.02976 6.27046 6.49635 6.63517 6.64587 6.76520 6.81444 7.03775 7.30689 7.49346 7.60880 7.71173 8.01464 8.16525 8.35706 8.45515 9.38451 9.72868 Molecular weight = 290.06amu Principal moments of inertia in cm(-1) A = 0.035031 B = 0.003375 C = 0.003111 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 799.091228 B = 8294.093282 C = 8996.878036 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.042 3.958 2 O -0.303 6.303 3 C 0.292 3.708 4 N -0.518 5.518 5 C 0.119 3.881 6 C -0.043 4.043 7 C -0.010 4.010 8 C -0.118 4.118 9 C -0.144 4.144 10 C 0.069 3.931 11 C -0.426 4.426 12 H 0.089 0.911 13 C 0.071 3.929 14 N -0.770 5.770 15 Si 0.918 3.082 16 H -0.259 1.259 17 H -0.275 1.275 18 H -0.261 1.261 19 C -0.013 4.013 20 N -0.446 5.446 21 C -0.035 4.035 22 C -0.097 4.097 23 Cl -0.060 7.060 24 H 0.057 0.943 25 H 0.092 0.908 26 H 0.057 0.943 27 H 0.165 0.835 28 H 0.102 0.898 29 H 0.128 0.872 30 H 0.290 0.710 31 H 0.131 0.869 32 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.412 -7.909 -1.509 9.182 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.053 4.053 2 O -0.211 6.211 3 C 0.113 3.887 4 N -0.241 5.241 5 C -0.038 4.038 6 C -0.047 4.047 7 C -0.144 4.144 8 C -0.139 4.139 9 C -0.168 4.168 10 C 0.065 3.935 11 C -0.454 4.454 12 H 0.107 0.893 13 C -0.151 4.151 14 N -0.393 5.393 15 Si 0.741 3.259 16 H -0.184 1.184 17 H -0.199 1.199 18 H -0.185 1.185 19 C -0.179 4.179 20 N -0.154 5.154 21 C -0.062 4.062 22 C -0.126 4.126 23 Cl -0.032 7.032 24 H 0.075 0.925 25 H 0.110 0.890 26 H 0.075 0.925 27 H 0.182 0.818 28 H 0.120 0.880 29 H 0.146 0.854 30 H 0.101 0.899 31 H 0.149 0.851 32 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges -4.849 -9.031 -1.397 10.345 hybrid contribution 0.364 1.748 0.057 1.786 sum -4.486 -7.283 -1.341 8.658 Atomic orbital electron populations 1.22794 0.77709 1.02465 1.02337 1.86234 1.22386 1.24135 1.88307 1.19383 0.87528 0.85314 0.96513 1.67335 1.39347 0.98398 1.18994 1.22589 0.92377 0.93212 0.95626 1.19490 0.92781 0.92940 0.99452 1.18370 0.89613 0.89628 1.16785 1.21241 0.98411 0.93496 1.00704 1.21316 0.95039 0.96250 1.04226 1.18636 0.92597 0.93791 0.88523 1.19724 1.03846 0.92157 1.29710 0.89280 1.26131 0.93852 1.02549 0.92543 1.69773 1.17222 1.34541 1.17725 0.86178 0.80014 0.79511 0.80178 1.18367 1.19946 1.18497 1.22447 0.98275 0.87026 1.10169 1.66873 1.10490 1.28967 1.09039 1.21492 1.01863 0.88231 0.94583 1.20766 0.89010 0.89298 1.13550 1.98335 1.71958 1.35683 1.97205 0.92477 0.88988 0.92477 0.81799 0.87961 0.85382 0.89899 0.85105 0.82637 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.48 10.37 101.05 1.05 1.53 16 2 O -0.30 -4.57 9.93 -18.50 -0.18 -4.76 16 3 C 0.29 4.92 7.49 -16.96 -0.13 4.79 16 4 N -0.52 -8.75 9.18 -12.92 -0.12 -8.86 16 5 C 0.12 2.05 10.58 -17.12 -0.18 1.87 16 6 C -0.04 -0.83 5.89 -104.74 -0.62 -1.44 16 7 C -0.01 -0.22 6.73 -82.75 -0.56 -0.78 16 8 C -0.12 -2.54 9.38 -39.54 -0.37 -2.91 16 9 C -0.14 -3.37 8.74 -39.01 -0.34 -3.71 16 10 C 0.07 1.68 5.59 -106.63 -0.60 1.08 16 11 C -0.43 -9.96 9.06 -37.86 -0.34 -10.30 16 12 H 0.09 1.95 7.91 -52.49 -0.41 1.53 16 13 C 0.07 1.57 5.17 -17.33 -0.09 1.48 16 14 N -0.77 -17.59 10.92 55.55 0.61 -16.98 16 15 Si 0.92 16.37 29.60 -169.99 -5.03 11.34 16 16 H -0.26 -4.62 7.11 56.52 0.40 -4.22 16 17 H -0.27 -4.80 7.11 56.52 0.40 -4.40 16 18 H -0.26 -4.61 7.11 56.52 0.40 -4.21 16 19 C -0.01 -0.30 10.97 -16.77 -0.18 -0.48 16 20 N -0.45 -10.24 9.47 -9.11 -0.09 -10.33 16 21 C -0.04 -0.64 9.48 -38.89 -0.37 -1.01 16 22 C -0.10 -1.64 6.35 -39.26 -0.25 -1.89 16 23 Cl -0.06 -0.91 28.52 -51.86 -1.48 -2.39 16 24 H 0.06 0.64 8.10 -51.93 -0.42 0.22 16 25 H 0.09 0.76 8.14 -51.92 -0.42 0.34 16 26 H 0.06 0.64 8.10 -51.93 -0.42 0.22 16 27 H 0.17 2.49 6.19 -52.49 -0.32 2.16 16 28 H 0.10 1.87 6.20 -52.49 -0.33 1.54 16 29 H 0.13 3.03 6.19 -52.49 -0.32 2.71 16 30 H 0.29 5.97 8.30 -40.82 -0.34 5.63 16 31 H 0.13 2.77 8.06 -52.49 -0.42 2.35 16 32 H 0.16 2.82 7.62 -52.49 -0.40 2.42 16 LS Contribution 299.56 15.07 4.51 4.51 Total: -1.00 -25.59 299.56 -7.37 -32.95 By element: Atomic # 1 Polarization: 8.91 SS G_CDS: -2.61 Total: 6.30 kcal Atomic # 6 Polarization: -8.81 SS G_CDS: -2.98 Total: -11.78 kcal Atomic # 7 Polarization: -36.58 SS G_CDS: 0.40 Total: -36.18 kcal Atomic # 8 Polarization: -4.57 SS G_CDS: -0.18 Total: -4.76 kcal Atomic # 14 Polarization: 16.37 SS G_CDS: -5.03 Total: 11.34 kcal Atomic # 17 Polarization: -0.91 SS G_CDS: -1.48 Total: -2.39 kcal Total LS contribution 4.51 Total: 4.51 kcal Total: -25.59 -7.37 -32.95 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001242929766.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.993 kcal (2) G-P(sol) polarization free energy of solvation -25.587 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 18.406 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.366 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.952 kcal (6) G-S(sol) free energy of system = (1) + (5) 11.040 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds