Wall clock time and date at job start Tue Mar 31 2020 06:22:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35708 * 117.00064 * 2 1 4 4 N 1.32269 * 119.63071 * 359.97438 * 3 2 1 5 5 C 1.32003 * 122.00291 * 180.02562 * 4 3 2 6 6 C 1.37823 * 121.00679 * 359.97438 * 5 4 3 7 7 C 1.40098 * 119.13808 * 0.02562 * 6 5 4 8 8 C 1.48021 * 120.90363 * 179.97438 * 7 6 5 9 9 C 1.39851 * 119.44673 * 0.02562 * 8 7 6 10 10 C 1.36651 * 119.46386 * 179.67312 * 9 8 7 11 11 C 1.41286 * 118.40832 * 0.56160 * 10 9 8 12 12 C 1.41054 * 120.55680 * 179.72950 * 11 10 9 13 13 H 1.08007 * 120.00036 * 26.19630 * 12 11 10 14 14 C 1.40060 * 120.00165 * 206.19534 * 12 11 10 15 15 N 1.30763 * 119.99860 * 25.11989 * 14 12 11 16 16 Si 1.86804 * 120.00353 * 205.11845 * 14 12 11 17 17 H 1.48500 * 109.47303 * 180.02562 * 16 14 12 18 18 H 1.48506 * 109.46946 * 300.00239 * 16 14 12 19 19 H 1.48495 * 109.47050 * 59.99923 * 16 14 12 20 20 C 1.40960 * 118.88411 * 359.46011 * 11 10 9 21 21 N 1.31249 * 120.40067 * 0.24943 * 20 11 10 22 22 C 1.38816 * 119.62388 * 180.28036 * 3 2 1 23 23 Cl 1.73594 * 120.54365 * 0.03028 * 22 3 2 24 24 H 1.09001 * 109.46948 * 300.00260 * 1 2 3 25 25 H 1.09005 * 109.46723 * 59.99482 * 1 2 3 26 26 H 1.08993 * 109.47173 * 179.97438 * 1 2 3 27 27 H 1.08001 * 119.49491 * 180.02562 * 5 4 3 28 28 H 1.08005 * 120.42904 * 180.02562 * 6 5 4 29 29 H 1.07997 * 120.26665 * 359.97438 * 9 8 7 30 30 H 1.08000 * 120.79493 * 180.29748 * 10 9 8 31 31 H 0.96996 * 120.00355 * 5.83146 * 15 14 12 32 32 H 1.07999 * 119.79997 * 180.27233 * 20 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0452 1.2092 0.0000 4 7 1.3176 2.3138 -0.0005 5 6 1.8677 3.5138 -0.0010 6 6 3.2374 3.6669 -0.0005 7 6 4.0513 2.5265 0.0000 8 6 5.5267 2.6456 0.0000 9 6 6.1141 3.9148 -0.0001 10 6 7.4761 4.0251 0.0067 11 6 8.2465 2.8407 0.0013 12 6 9.6557 2.9018 0.0022 13 1 10.1587 3.7617 0.4195 14 6 10.4027 1.8474 -0.5380 15 7 9.8753 1.0723 -1.4495 16 14 12.1525 1.5484 0.0437 17 1 12.7215 0.3818 -0.6779 18 1 12.9783 2.7514 -0.2323 19 1 12.1490 1.2746 1.5032 20 6 7.5831 1.5970 0.0009 21 7 6.2717 1.5437 0.0005 22 6 3.4319 1.2727 -0.0059 23 17 4.3815 -0.1804 -0.0141 24 1 -0.3633 0.5139 0.8900 25 1 -0.3633 0.5139 -0.8900 26 1 -0.3633 -1.0276 -0.0005 27 1 1.2348 4.3889 -0.0010 28 1 3.6776 4.6531 -0.0006 29 1 5.4962 4.8005 -0.0005 30 1 7.9523 4.9944 0.0116 31 1 8.9997 1.2772 -1.8129 32 1 8.1574 0.6823 0.0013 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001243313462.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 06:22:15 Heat of formation + Delta-G solvation = 16.472455 kcal Electronic energy + Delta-G solvation = -19720.138106 eV Core-core repulsion = 16478.624988 eV Total energy + Delta-G solvation = -3241.513118 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 290.056 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -40.26982 -38.73835 -37.49985 -35.67406 -34.72524 -32.35957 -31.39817 -30.24832 -29.12482 -27.19293 -25.73783 -23.45588 -22.96171 -21.58707 -20.89623 -18.34108 -17.97239 -16.89376 -15.98950 -15.85384 -15.13590 -15.09702 -14.68743 -14.15964 -13.96698 -13.87688 -13.55784 -12.82042 -12.44987 -12.29861 -12.10696 -11.91380 -11.57714 -11.44330 -11.24105 -11.14584 -10.99899 -10.60537 -10.19076 -10.17838 -9.59553 -9.43171 -9.24880 -8.73079 -8.05562 -7.91699 -7.70088 -7.60169 -4.82115 1.18400 1.42921 2.55063 2.70063 2.92677 2.98092 3.10196 3.19150 3.24729 3.74280 3.98628 4.38427 4.58236 4.98316 5.25041 5.30847 5.31970 5.37472 5.43225 5.61913 5.71173 5.81525 6.07010 6.12787 6.27133 6.53573 6.61272 6.65213 6.84534 7.24711 7.31025 7.32583 7.40587 7.58185 7.79718 8.06805 8.22003 8.34177 9.36855 9.60332 Molecular weight = 290.06amu Principal moments of inertia in cm(-1) A = 0.030592 B = 0.004299 C = 0.003828 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 915.041104 B = 6510.876394 C = 7311.941553 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.043 3.957 2 O -0.301 6.301 3 C 0.325 3.675 4 N -0.555 5.555 5 C 0.134 3.866 6 C -0.218 4.218 7 C 0.101 3.899 8 C -0.046 4.046 9 C -0.085 4.085 10 C -0.207 4.207 11 C 0.051 3.949 12 C -0.469 4.469 13 H 0.087 0.913 14 C 0.032 3.968 15 N -0.761 5.761 16 Si 1.069 2.931 17 H -0.269 1.269 18 H -0.272 1.272 19 H -0.270 1.270 20 C -0.005 4.005 21 N -0.408 5.408 22 C -0.115 4.115 23 Cl -0.019 7.019 24 H 0.056 0.944 25 H 0.056 0.944 26 H 0.092 0.908 27 H 0.157 0.843 28 H 0.139 0.861 29 H 0.105 0.895 30 H 0.107 0.893 31 H 0.305 0.695 32 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.814 1.914 1.747 9.187 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.053 4.053 2 O -0.208 6.208 3 C 0.146 3.854 4 N -0.281 5.281 5 C -0.019 4.019 6 C -0.240 4.240 7 C 0.093 3.907 8 C -0.175 4.175 9 C -0.105 4.105 10 C -0.231 4.231 11 C 0.045 3.955 12 C -0.496 4.496 13 H 0.105 0.895 14 C -0.194 4.194 15 N -0.382 5.382 16 Si 0.891 3.109 17 H -0.193 1.193 18 H -0.197 1.197 19 H -0.195 1.195 20 C -0.176 4.176 21 N -0.115 5.115 22 C -0.145 4.145 23 Cl 0.010 6.990 24 H 0.074 0.926 25 H 0.074 0.926 26 H 0.110 0.890 27 H 0.174 0.826 28 H 0.156 0.844 29 H 0.123 0.877 30 H 0.125 0.875 31 H 0.119 0.881 32 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -8.780 -0.395 1.517 8.919 hybrid contribution -0.255 2.124 0.110 2.142 sum -9.035 1.729 1.628 9.342 Atomic orbital electron populations 1.22786 0.77842 1.02483 1.02146 1.86309 1.22290 1.24258 1.87934 1.19375 0.87608 0.85131 0.93250 1.67269 1.39788 0.98444 1.22601 1.22123 0.92610 0.93300 0.93875 1.21947 0.93915 0.99002 1.09155 1.18731 0.92859 0.89859 0.89300 1.18423 0.89624 0.89559 1.19934 1.21182 0.95297 0.96361 0.97669 1.20942 0.92905 0.97608 1.11623 1.18752 0.94426 0.92671 0.89607 1.20861 0.91530 1.05680 1.31540 0.89507 1.27388 1.07556 0.91292 0.93140 1.70450 1.19065 1.33374 1.15282 0.83555 0.71842 0.77959 0.77539 1.19312 1.19694 1.19464 1.22758 0.89251 0.96765 1.08778 1.67510 1.07231 1.30597 1.06158 1.20830 0.88574 0.90687 1.14440 1.98359 1.71039 1.33068 1.96530 0.92562 0.92566 0.88965 0.82555 0.84353 0.87674 0.87476 0.88090 0.84376 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.52 10.38 101.05 1.05 1.57 16 2 O -0.30 -5.05 9.95 -18.83 -0.19 -5.24 16 3 C 0.33 5.97 7.48 -17.15 -0.13 5.84 16 4 N -0.56 -9.24 9.19 -13.39 -0.12 -9.36 16 5 C 0.13 1.98 11.16 -17.63 -0.20 1.79 16 6 C -0.22 -3.57 9.48 -39.04 -0.37 -3.94 16 7 C 0.10 2.04 5.91 -104.58 -0.62 1.42 16 8 C -0.05 -1.03 6.74 -82.75 -0.56 -1.59 16 9 C -0.08 -1.78 9.40 -39.55 -0.37 -2.15 16 10 C -0.21 -4.62 9.88 -39.00 -0.39 -5.01 16 11 C 0.05 1.25 5.29 -106.64 -0.56 0.68 16 12 C -0.47 -11.06 9.00 -37.83 -0.34 -11.40 16 13 H 0.09 1.94 7.96 -52.48 -0.42 1.53 16 14 C 0.03 0.72 4.95 -17.32 -0.09 0.64 16 15 N -0.76 -18.41 12.35 55.55 0.69 -17.73 16 16 Si 1.07 19.07 30.00 -169.99 -5.10 13.97 16 17 H -0.27 -4.82 7.11 56.52 0.40 -4.42 16 18 H -0.27 -4.56 7.11 56.52 0.40 -4.16 16 19 H -0.27 -4.67 7.11 56.52 0.40 -4.27 16 20 C -0.01 -0.13 9.15 -16.77 -0.15 -0.28 16 21 N -0.41 -9.91 6.98 -9.10 -0.06 -9.98 16 22 C -0.11 -2.33 6.39 -38.76 -0.25 -2.58 16 23 Cl -0.02 -0.40 25.41 -51.86 -1.32 -1.72 16 24 H 0.06 0.65 8.10 -51.93 -0.42 0.23 16 25 H 0.06 0.66 8.10 -51.93 -0.42 0.24 16 26 H 0.09 0.85 8.14 -51.93 -0.42 0.42 16 27 H 0.16 1.66 8.06 -52.49 -0.42 1.24 16 28 H 0.14 1.93 6.28 -52.48 -0.33 1.60 16 29 H 0.11 1.83 6.24 -52.49 -0.33 1.51 16 30 H 0.11 2.18 8.06 -52.49 -0.42 1.76 16 31 H 0.30 7.69 6.72 -40.82 -0.27 7.42 16 32 H 0.14 3.51 6.57 -52.49 -0.34 3.16 16 LS Contribution 294.63 15.07 4.44 4.44 Total: -1.00 -27.14 294.63 -7.23 -34.37 By element: Atomic # 1 Polarization: 8.86 SS G_CDS: -2.60 Total: 6.26 kcal Atomic # 6 Polarization: -12.05 SS G_CDS: -2.97 Total: -15.02 kcal Atomic # 7 Polarization: -37.56 SS G_CDS: 0.50 Total: -37.06 kcal Atomic # 8 Polarization: -5.05 SS G_CDS: -0.19 Total: -5.24 kcal Atomic # 14 Polarization: 19.07 SS G_CDS: -5.10 Total: 13.97 kcal Atomic # 17 Polarization: -0.40 SS G_CDS: -1.32 Total: -1.72 kcal Total LS contribution 4.44 Total: 4.44 kcal Total: -27.14 -7.23 -34.37 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001243313462.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 50.844 kcal (2) G-P(sol) polarization free energy of solvation -27.137 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 23.707 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.235 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.371 kcal (6) G-S(sol) free energy of system = (1) + (5) 16.472 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds